Wall clock time and date at job start Sun Mar 7 2021 06:21:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35904 * 116.99885 * 2 1 4 4 C 1.38605 * 120.02843 * 179.97438 * 3 2 1 5 5 C 1.38663 * 119.89209 * 179.77081 * 4 3 2 6 6 O 1.35889 * 120.02824 * 180.27345 * 5 4 3 7 7 C 1.42905 * 117.00443 * 0.23044 * 6 5 4 8 8 C 1.50694 * 109.47201 * 180.02562 * 7 6 5 9 9 O 1.21281 * 120.00165 * 359.97438 * 8 7 6 10 10 N 1.34782 * 119.99819 * 180.02562 * 8 7 6 11 11 C 1.46493 * 119.99877 * 180.02562 * 10 8 7 12 12 H 1.08999 * 112.85685 * 334.66303 * 11 10 8 13 13 C 1.53784 * 113.61629 * 105.86147 * 11 10 8 14 14 C 1.54050 * 86.98937 * 89.16094 * 13 11 10 15 15 H 1.09004 * 113.61166 * 270.89190 * 14 13 11 16 16 C 1.50697 * 113.70056 * 139.99209 * 14 13 11 17 17 N 1.30501 * 125.65200 * 167.16320 * 16 14 13 18 18 C 1.34122 * 109.25617 * 179.89505 * 17 16 14 19 19 C 1.34674 * 108.02305 * 0.36342 * 18 17 16 20 20 N 1.35047 * 125.64699 * 347.46615 * 16 14 13 21 21 C 1.53781 * 87.07568 * 25.43263 * 14 13 11 22 22 C 1.38753 * 119.93990 * 0.50257 * 5 4 3 23 23 C 1.50701 * 119.96926 * 179.77205 * 22 5 4 24 24 O 1.42905 * 109.46937 * 284.72559 * 23 22 5 25 25 Si 1.86301 * 109.47149 * 164.72488 * 23 22 5 26 26 C 1.38190 * 120.05477 * 359.49406 * 22 5 4 27 27 C 1.38156 * 120.11391 * 0.25753 * 26 22 5 28 28 H 1.08997 * 109.47020 * 180.02562 * 1 2 3 29 29 H 1.09006 * 109.47142 * 299.99592 * 1 2 3 30 30 H 1.08999 * 109.47316 * 59.99842 * 1 2 3 31 31 H 1.08001 * 120.05481 * 359.97438 * 4 3 2 32 32 H 1.09001 * 109.46594 * 300.00422 * 7 6 5 33 33 H 1.08998 * 109.47134 * 59.99857 * 7 6 5 34 34 H 0.97003 * 120.00012 * 359.97438 * 10 8 7 35 35 H 1.08996 * 113.61503 * 203.66520 * 13 11 10 36 36 H 1.09000 * 113.61341 * 334.56301 * 13 11 10 37 37 H 1.07999 * 125.98999 * 180.11623 * 18 17 16 38 38 H 1.07995 * 126.59577 * 179.74288 * 19 18 17 39 39 H 0.97001 * 126.39623 * 359.94504 * 20 16 14 40 40 H 1.09001 * 113.61397 * 220.02746 * 21 14 13 41 41 H 1.08993 * 113.69502 * 89.13191 * 21 14 13 42 42 H 1.09001 * 109.46927 * 44.72303 * 23 22 5 43 43 H 0.96705 * 113.99788 * 300.00011 * 24 23 22 44 44 H 1.48498 * 109.99736 * 58.68050 * 25 23 22 45 45 H 1.48493 * 110.00101 * 179.97438 * 25 23 22 46 46 H 1.08007 * 119.94594 * 180.22705 * 26 22 5 47 47 H 1.07998 * 119.97382 * 180.02562 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2109 0.0000 4 6 3.4301 1.2842 0.0005 5 6 4.0566 2.5212 -0.0043 6 8 5.4134 2.5962 -0.0094 7 6 6.1316 1.3607 -0.0146 8 6 7.6124 1.6404 -0.0191 9 8 8.0133 2.7851 -0.0185 10 7 8.4912 0.6185 -0.0250 11 6 9.9306 0.8905 -0.0288 12 1 10.1768 1.8623 -0.4566 13 6 10.6119 0.6224 1.3236 14 6 10.8295 -0.8225 0.8356 15 1 10.0041 -1.4930 1.0748 16 6 12.1735 -1.3922 1.2097 17 7 12.5159 -2.6489 1.1297 18 6 13.7842 -2.7890 1.5429 19 6 14.2427 -1.5741 1.8999 20 7 13.2213 -0.6876 1.6887 21 6 10.7741 -0.2636 -0.5960 22 6 3.2970 3.6823 0.0009 23 6 3.9772 5.0270 0.0009 24 8 4.5029 5.2949 1.3025 25 14 2.7438 6.3469 -0.4545 26 6 1.9171 3.6065 0.0003 27 6 1.2905 2.3753 -0.0001 28 1 -0.3633 -1.0276 0.0005 29 1 -0.3634 0.5138 0.8901 30 1 -0.3634 0.5138 -0.8900 31 1 4.0196 0.3793 0.0014 32 1 5.8733 0.7867 0.8753 33 1 5.8665 0.7901 -0.9047 34 1 8.1705 -0.2969 -0.0259 35 1 11.5379 1.1799 1.4642 36 1 9.9365 0.7000 2.1756 37 1 14.3391 -3.7145 1.5859 38 1 15.2268 -1.3436 2.2803 39 1 13.2456 0.2682 1.8523 40 1 10.2295 -0.9009 -1.2927 41 1 11.7437 0.0523 -0.9807 42 1 4.7900 5.0230 -0.7254 43 1 3.8340 5.3134 2.0006 44 1 1.6148 6.3414 0.5101 45 1 3.4022 7.6779 -0.4575 46 1 1.3275 4.5115 0.0007 47 1 0.2120 2.3187 -0.0009 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_4974312.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:21:55 Heat of formation + Delta-G solvation = -15.020252 kcal Electronic energy + Delta-G solvation = -31229.866818 eV Core-core repulsion = 26768.590814 eV Total energy + Delta-G solvation = -4461.276004 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 360.156 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -43.11029 -41.85544 -41.18639 -40.08705 -39.22457 -38.28732 -36.99900 -34.65665 -33.45408 -32.30519 -31.50490 -30.71818 -29.33725 -28.34776 -26.84951 -26.14811 -26.11587 -23.83366 -22.62903 -22.49275 -21.89974 -21.78022 -20.53538 -19.96480 -19.07363 -18.57473 -18.09751 -17.82072 -17.52887 -17.23423 -16.94419 -16.66845 -16.48496 -16.23880 -16.03477 -15.77060 -15.69802 -15.31893 -15.27293 -15.16000 -14.77538 -14.57366 -14.51385 -14.41632 -13.78686 -13.65624 -13.51195 -13.38326 -13.32542 -13.13541 -12.53907 -12.47329 -12.30003 -12.02819 -11.92631 -11.65518 -11.62507 -11.53606 -11.07289 -11.05655 -11.02682 -10.51065 -10.24308 -9.69837 -9.36174 -9.10144 -4.92412 0.20422 0.31038 1.07969 1.32300 1.38726 1.39919 1.56179 1.96603 2.10863 2.19153 2.25326 2.54828 2.57552 3.25756 3.35499 3.47034 3.50153 3.59039 3.72493 3.75692 3.80764 3.95586 4.04778 4.06940 4.07520 4.17554 4.22774 4.34936 4.40837 4.42761 4.46606 4.51702 4.53395 4.58811 4.63496 4.66675 4.76275 4.79429 4.85040 4.93768 5.01528 5.02617 5.13437 5.23992 5.28191 5.43198 5.48281 5.77965 6.12764 6.35121 6.41826 6.46645 6.57583 7.07583 7.11661 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.330 6.330 3 C 0.164 3.836 4 C -0.252 4.252 5 C 0.178 3.822 6 O -0.302 6.302 7 C 0.033 3.967 8 C 0.519 3.481 9 O -0.564 6.564 10 N -0.693 5.693 11 C 0.124 3.876 12 H 0.093 0.907 13 C -0.143 4.143 14 C -0.022 4.022 15 H 0.125 0.875 16 C 0.209 3.791 17 N -0.530 5.530 18 C -0.063 4.063 19 C -0.046 4.046 20 N -0.559 5.559 21 C -0.119 4.119 22 C -0.195 4.195 23 C -0.077 4.077 24 O -0.549 6.549 25 Si 0.780 3.220 26 C -0.041 4.041 27 C -0.238 4.238 28 H 0.116 0.884 29 H 0.066 0.934 30 H 0.070 0.930 31 H 0.154 0.846 32 H 0.120 0.880 33 H 0.126 0.874 34 H 0.421 0.579 35 H 0.098 0.902 36 H 0.080 0.920 37 H 0.178 0.822 38 H 0.208 0.792 39 H 0.431 0.569 40 H 0.095 0.905 41 H 0.098 0.902 42 H 0.098 0.902 43 H 0.381 0.619 44 H -0.263 1.263 45 H -0.308 1.308 46 H 0.155 0.845 47 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.094 -3.103 -1.169 5.268 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.243 6.243 3 C 0.118 3.882 4 C -0.271 4.271 5 C 0.131 3.869 6 O -0.214 6.214 7 C -0.044 4.044 8 C 0.305 3.695 9 O -0.442 6.442 10 N -0.348 5.348 11 C 0.018 3.982 12 H 0.111 0.889 13 C -0.182 4.182 14 C -0.042 4.042 15 H 0.143 0.857 16 C -0.055 4.055 17 N -0.250 5.250 18 C -0.210 4.210 19 C -0.180 4.180 20 N -0.164 5.164 21 C -0.158 4.158 22 C -0.196 4.196 23 C -0.184 4.184 24 O -0.357 6.357 25 Si 0.684 3.316 26 C -0.059 4.059 27 C -0.257 4.257 28 H 0.134 0.866 29 H 0.085 0.915 30 H 0.089 0.911 31 H 0.171 0.829 32 H 0.138 0.862 33 H 0.143 0.857 34 H 0.260 0.740 35 H 0.117 0.883 36 H 0.099 0.901 37 H 0.195 0.805 38 H 0.225 0.775 39 H 0.271 0.729 40 H 0.113 0.887 41 H 0.116 0.884 42 H 0.117 0.883 43 H 0.230 0.770 44 H -0.189 1.189 45 H -0.237 1.237 46 H 0.173 0.827 47 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges -3.929 -2.284 -1.520 4.792 hybrid contribution 0.841 0.163 1.716 1.918 sum -3.088 -2.121 0.196 3.751 Atomic orbital electron populations 1.23399 0.76030 1.05686 1.02676 1.86058 1.23732 1.26603 1.87929 1.18880 0.91695 0.84951 0.92683 1.20565 0.93391 0.97467 1.15676 1.18566 0.81725 0.93117 0.93449 1.86214 1.15474 1.31632 1.88116 1.22745 0.88405 0.86518 1.06772 1.20418 0.88417 0.85094 0.75523 1.90782 1.80648 1.23125 1.49611 1.45342 1.05063 1.09654 1.74702 1.21738 0.79448 0.99976 0.97038 0.88889 1.23553 1.01830 0.94473 0.98331 1.21188 0.89921 0.95665 0.97409 0.85708 1.23297 0.92705 0.87332 1.02212 1.70174 1.15010 1.17488 1.22331 1.22749 0.92615 0.99213 1.06388 1.23286 0.96075 0.89994 1.08630 1.43296 1.11435 1.11944 1.49678 1.23313 1.00842 0.96009 0.95652 1.19598 0.93482 0.93977 1.12589 1.25140 1.06266 0.99660 0.87357 1.86649 1.38539 1.93059 1.17438 0.94114 0.75478 0.73425 0.88626 1.20943 0.92055 0.98780 0.94123 1.21396 1.01596 0.91265 1.11397 0.86588 0.91509 0.91093 0.82853 0.86229 0.85667 0.74045 0.88337 0.90133 0.80508 0.77544 0.72854 0.88662 0.88363 0.88347 0.77026 1.18918 1.23673 0.82746 0.82586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.11 9.81 113.37 1.11 1.01 16 2 O -0.33 -0.19 10.50 -92.47 -0.97 -1.16 16 3 C 0.16 0.23 6.68 22.49 0.15 0.38 16 4 C -0.25 -0.43 8.97 22.46 0.20 -0.22 16 5 C 0.18 0.88 6.66 22.49 0.15 1.03 16 6 O -0.30 -2.25 8.99 -73.27 -0.66 -2.91 16 7 C 0.03 -0.04 5.22 71.23 0.37 0.33 16 8 C 0.52 1.62 7.91 87.65 0.69 2.31 16 9 O -0.56 -8.19 16.12 16.00 0.26 -7.93 16 10 N -0.69 2.98 5.26 -440.04 -2.32 0.66 16 11 C 0.12 -0.39 4.30 45.52 0.20 -0.19 16 12 H 0.09 0.11 7.50 -2.39 -0.02 0.09 16 13 C -0.14 0.66 7.37 31.21 0.23 0.89 16 14 C -0.02 0.08 4.18 -10.92 -0.05 0.03 16 15 H 0.13 -0.59 8.14 -2.39 -0.02 -0.61 16 16 C 0.21 0.47 7.37 138.13 1.02 1.49 16 17 N -0.53 -4.46 11.25 -188.13 -2.12 -6.58 16 18 C -0.06 -0.30 11.87 83.53 0.99 0.69 16 19 C -0.05 0.03 12.04 83.09 1.00 1.03 16 20 N -0.56 0.99 5.94 -186.27 -1.11 -0.12 16 21 C -0.12 0.62 7.37 31.12 0.23 0.85 16 22 C -0.20 -0.76 5.27 -19.75 -0.10 -0.86 16 23 C -0.08 -0.43 2.38 71.24 0.17 -0.26 16 24 O -0.55 -5.18 12.88 -148.98 -1.92 -7.10 16 25 Si 0.78 0.32 30.24 68.60 2.07 2.39 16 26 C -0.04 0.02 8.65 22.24 0.19 0.21 16 27 C -0.24 0.29 9.04 22.38 0.20 0.49 16 28 H 0.12 -1.08 8.14 -2.39 -0.02 -1.10 16 29 H 0.07 -0.54 7.66 -2.38 -0.02 -0.56 16 30 H 0.07 -0.61 7.66 -2.39 -0.02 -0.63 16 31 H 0.15 -0.42 6.30 -2.91 -0.02 -0.44 16 32 H 0.12 -0.77 7.65 -2.39 -0.02 -0.79 16 33 H 0.13 -0.92 7.67 -2.39 -0.02 -0.94 16 34 H 0.42 -4.62 8.70 -92.71 -0.81 -5.43 16 35 H 0.10 -0.67 6.66 -2.39 -0.02 -0.69 16 36 H 0.08 -0.26 8.14 -2.39 -0.02 -0.28 16 37 H 0.18 0.27 8.06 -2.91 -0.02 0.24 16 38 H 0.21 -1.59 8.06 -2.91 -0.02 -1.61 16 39 H 0.43 -3.23 7.54 -92.71 -0.70 -3.93 16 40 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 41 H 0.10 -0.45 8.10 -2.39 -0.02 -0.47 16 42 H 0.10 0.84 7.82 -2.39 -0.02 0.82 16 43 H 0.38 0.77 8.70 -74.05 -0.64 0.13 16 44 H -0.26 -0.20 6.68 99.48 0.66 0.47 16 45 H -0.31 -2.72 7.11 99.48 0.71 -2.02 16 46 H 0.16 -0.70 4.85 -2.91 -0.01 -0.72 16 47 H 0.16 -0.98 6.29 -2.91 -0.02 -1.00 16 Total: 0.00 -32.56 391.83 -1.10 -33.66 By element: Atomic # 1 Polarization: -19.01 SS G_CDS: -1.10 Total: -20.11 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: 6.76 Total: 9.19 kcal Atomic # 7 Polarization: -0.49 SS G_CDS: -5.54 Total: -6.03 kcal Atomic # 8 Polarization: -15.81 SS G_CDS: -3.29 Total: -19.10 kcal Atomic # 14 Polarization: 0.32 SS G_CDS: 2.07 Total: 2.39 kcal Total: -32.56 -1.10 -33.66 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_4974312.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.638 kcal (2) G-P(sol) polarization free energy of solvation -32.561 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -13.923 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.097 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.658 kcal (6) G-S(sol) free energy of system = (1) + (5) -15.020 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.24 seconds