Wall clock time and date at job start Sun Mar 7 2021 06:22:10 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 C 1.46900 * 110.99685 * 2 1 4 4 C 1.50700 * 109.47294 * 293.94704 * 3 2 1 5 5 O 1.21279 * 119.99795 * 0.02562 * 4 3 2 6 6 N 1.34773 * 120.00325 * 180.02562 * 4 3 2 7 7 C 1.46498 * 120.00318 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84630 * 334.66446 * 7 6 4 9 9 C 1.53774 * 113.61507 * 105.86239 * 7 6 4 10 10 C 1.54048 * 86.98622 * 89.16576 * 9 7 6 11 11 H 1.09007 * 113.69015 * 270.87231 * 10 9 7 12 12 C 1.50703 * 113.62289 * 139.97782 * 10 9 7 13 13 N 1.30498 * 125.64747 * 167.19477 * 12 10 9 14 14 C 1.34128 * 109.25289 * 179.89518 * 13 12 10 15 15 C 1.34671 * 108.02089 * 0.36834 * 14 13 12 16 16 N 1.35036 * 125.64962 * 347.50474 * 12 10 9 17 17 C 1.53782 * 113.61538 * 203.47557 * 7 6 4 18 18 C 1.39676 * 110.99870 * 123.94817 * 2 1 3 19 19 C 1.38886 * 120.07123 * 116.04582 * 18 2 1 20 20 C 1.50698 * 120.04213 * 0.04885 * 19 18 2 21 21 O 1.42901 * 109.47110 * 284.97867 * 20 19 18 22 22 Si 1.86297 * 109.47516 * 164.97353 * 20 19 18 23 23 C 1.38133 * 119.92263 * 180.02562 * 19 18 2 24 24 C 1.38265 * 120.07407 * 0.28038 * 23 19 18 25 25 C 1.50698 * 119.92365 * 179.69849 * 24 23 19 26 26 F 1.39901 * 109.47046 * 90.00292 * 25 24 23 27 27 F 1.39898 * 109.47118 * 210.00072 * 25 24 23 28 28 F 1.39898 * 109.47325 * 329.99884 * 25 24 23 29 29 C 1.38306 * 120.14784 * 359.44555 * 24 23 19 30 30 C 1.38089 * 120.07673 * 0.55309 * 29 24 23 31 31 H 1.08995 * 109.47484 * 296.04926 * 1 2 3 32 32 H 1.09005 * 109.46350 * 56.05080 * 1 2 3 33 33 H 1.08999 * 109.46848 * 176.04488 * 1 2 3 34 34 H 1.08999 * 109.47636 * 53.95527 * 3 2 1 35 35 H 1.09007 * 109.47132 * 173.95308 * 3 2 1 36 36 H 0.97003 * 119.99434 * 0.02562 * 6 4 3 37 37 H 1.09002 * 113.61295 * 203.66737 * 9 7 6 38 38 H 1.08995 * 113.61564 * 334.56938 * 9 7 6 39 39 H 1.08001 * 125.99427 * 180.11629 * 14 13 12 40 40 H 1.07997 * 126.59326 * 179.81205 * 15 14 13 41 41 H 0.97001 * 126.39948 * 359.97438 * 16 12 10 42 42 H 1.08994 * 113.61567 * 25.42348 * 17 7 6 43 43 H 1.08999 * 113.61407 * 156.25232 * 17 7 6 44 44 H 1.09004 * 109.46707 * 44.97596 * 20 19 18 45 45 H 0.96702 * 113.99987 * 59.99098 * 21 20 19 46 46 H 1.48500 * 110.00076 * 300.00325 * 22 20 19 47 47 H 1.48504 * 109.99840 * 61.32066 * 22 20 19 48 48 H 1.08002 * 119.95961 * 179.97438 * 23 19 18 49 49 H 1.08003 * 119.96002 * 180.27453 * 29 24 23 50 50 H 1.07998 * 120.03790 * 179.70139 * 30 29 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 6 1.9954 1.3715 0.0000 4 6 1.6370 2.0471 -1.2985 5 8 1.0049 1.4456 -2.1408 6 7 2.0189 3.3198 -1.5238 7 6 1.6700 3.9768 -2.7859 8 1 1.5139 3.2708 -3.6015 9 6 0.5465 5.0177 -2.6485 10 6 1.6505 6.0509 -2.3543 11 1 1.9056 6.1304 -1.2975 12 6 1.4111 7.3910 -3.0008 13 7 2.0537 8.4933 -2.7267 14 6 1.5784 9.4849 -3.4947 15 6 0.5988 8.9797 -4.2685 16 7 0.4923 7.6514 -3.9555 17 6 2.6026 5.1437 -3.1513 18 6 1.9696 -0.7282 1.0817 19 6 2.7117 -1.8812 0.8608 20 6 2.9791 -2.3481 -0.5469 21 8 1.7927 -2.9321 -1.0886 22 14 4.3443 -3.6157 -0.5320 23 6 3.2047 -2.5993 1.9328 24 6 2.9553 -2.1746 3.2248 25 6 3.4891 -2.9644 4.3919 26 9 4.7616 -2.4924 4.7314 27 9 2.6301 -2.8175 5.4863 28 9 3.5713 -4.3163 4.0418 29 6 2.2215 -1.0238 3.4482 30 6 1.7256 -0.3011 2.3811 31 1 -0.3634 0.4513 0.9232 32 1 -0.3632 0.5740 -0.8526 33 1 -0.3633 -1.0252 -0.0709 34 1 1.5611 1.9274 0.8309 35 1 3.0798 1.3445 0.1083 36 1 2.5248 3.8008 -0.8502 37 1 0.0092 5.2055 -3.5781 38 1 -0.1179 4.8341 -1.8042 39 1 1.9185 10.5100 -3.4902 40 1 0.0107 9.5187 -4.9964 41 1 -0.1275 7.0159 -4.3465 42 1 3.5970 5.0618 -2.7126 43 1 2.6276 5.3650 -4.2183 44 1 3.2788 -1.4986 -1.1606 45 1 1.0388 -2.3276 -1.1267 46 1 5.5837 -3.0207 0.0291 47 1 3.9353 -4.7930 0.2754 48 1 3.7815 -3.4962 1.7617 49 1 2.0323 -0.6924 4.4585 50 1 1.1486 0.5948 2.5563 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_6406254.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:22:10 Heat of formation + Delta-G solvation = -76.561231 kcal Electronic energy + Delta-G solvation = -39167.018645 eV Core-core repulsion = 33555.575332 eV Total energy + Delta-G solvation = -5611.443313 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 411.156 amu Computer time = 1.47 seconds Orbital eigenvalues (eV) -51.19635 -48.70928 -48.65475 -43.15943 -41.97536 -41.13955 -39.56108 -37.70936 -37.50701 -34.66370 -33.46419 -33.10659 -32.29155 -30.85453 -29.53168 -27.75669 -27.06721 -26.95489 -26.31660 -25.13888 -23.65943 -22.69330 -22.21381 -21.83978 -21.71049 -20.62008 -19.60951 -19.52071 -19.45378 -19.22067 -18.59623 -18.11078 -17.78901 -17.25653 -17.07245 -16.69491 -16.46323 -16.22519 -15.95487 -15.75005 -15.65155 -15.57835 -15.46452 -15.36101 -15.08589 -15.02717 -14.94222 -14.84892 -14.80109 -14.76211 -14.63181 -14.58479 -14.16964 -14.00374 -13.84460 -13.69636 -13.61975 -13.34450 -13.08018 -13.03795 -12.70990 -12.65472 -12.13635 -12.06987 -11.71298 -11.39187 -11.02703 -11.02071 -11.00540 -10.98930 -10.41186 -10.30660 -10.20620 -9.89262 -9.39380 -4.83717 -0.51085 -0.14979 1.02260 1.37142 1.40339 1.54348 1.63881 1.64613 1.94910 2.02621 2.06376 2.13486 2.45732 2.62818 2.88961 3.08497 3.20448 3.32317 3.33356 3.37465 3.44516 3.49646 3.56935 3.75115 3.79406 3.83017 3.87334 3.96243 3.99143 4.04874 4.06164 4.24323 4.29117 4.33162 4.36497 4.38509 4.43104 4.48008 4.52708 4.58788 4.65612 4.75981 4.77695 4.81423 4.82767 4.89012 4.99113 5.09216 5.19950 5.30721 5.35570 5.75603 5.87852 6.24079 6.31674 6.65076 7.01891 7.10198 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 N -0.491 5.491 3 C 0.036 3.964 4 C 0.520 3.480 5 O -0.512 6.512 6 N -0.715 5.715 7 C 0.127 3.873 8 H 0.110 0.890 9 C -0.149 4.149 10 C -0.025 4.025 11 H 0.119 0.881 12 C 0.216 3.784 13 N -0.487 5.487 14 C -0.027 4.027 15 C -0.055 4.055 16 N -0.565 5.565 17 C -0.132 4.132 18 C 0.129 3.871 19 C -0.085 4.085 20 C -0.067 4.067 21 O -0.532 6.532 22 Si 0.735 3.265 23 C -0.067 4.067 24 C -0.176 4.176 25 C 0.508 3.492 26 F -0.174 7.174 27 F -0.174 7.174 28 F -0.175 7.175 29 C -0.055 4.055 30 C -0.145 4.145 31 H 0.033 0.967 32 H 0.099 0.901 33 H 0.076 0.924 34 H 0.075 0.925 35 H 0.110 0.890 36 H 0.403 0.597 37 H 0.087 0.913 38 H 0.082 0.918 39 H 0.171 0.829 40 H 0.178 0.822 41 H 0.418 0.582 42 H 0.086 0.914 43 H 0.098 0.902 44 H 0.084 0.916 45 H 0.368 0.632 46 H -0.247 1.247 47 H -0.249 1.249 48 H 0.139 0.861 49 H 0.142 0.858 50 H 0.137 0.863 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.640 4.143 -2.733 5.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.129 4.129 2 N -0.212 5.212 3 C -0.094 4.094 4 C 0.306 3.694 5 O -0.386 6.386 6 N -0.368 5.368 7 C 0.021 3.979 8 H 0.128 0.872 9 C -0.188 4.188 10 C -0.045 4.045 11 H 0.136 0.864 12 C -0.048 4.048 13 N -0.206 5.206 14 C -0.175 4.175 15 C -0.189 4.189 16 N -0.169 5.169 17 C -0.171 4.171 18 C 0.034 3.966 19 C -0.086 4.086 20 C -0.177 4.177 21 O -0.337 6.337 22 Si 0.634 3.366 23 C -0.085 4.085 24 C -0.177 4.177 25 C 0.454 3.546 26 F -0.155 7.155 27 F -0.155 7.155 28 F -0.156 7.156 29 C -0.074 4.074 30 C -0.165 4.165 31 H 0.051 0.949 32 H 0.118 0.882 33 H 0.095 0.905 34 H 0.092 0.908 35 H 0.128 0.872 36 H 0.238 0.762 37 H 0.105 0.895 38 H 0.101 0.899 39 H 0.189 0.811 40 H 0.196 0.804 41 H 0.256 0.744 42 H 0.104 0.896 43 H 0.116 0.884 44 H 0.102 0.898 45 H 0.216 0.784 46 H -0.171 1.171 47 H -0.174 1.174 48 H 0.156 0.844 49 H 0.160 0.840 50 H 0.155 0.845 Dipole moment (debyes) X Y Z Total from point charges -0.364 2.622 -2.740 3.810 hybrid contribution -1.952 1.695 1.351 2.917 sum -2.316 4.317 -1.389 5.093 Atomic orbital electron populations 1.22743 0.83833 1.03975 1.02305 1.59258 1.09899 1.12143 1.39914 1.22081 1.02752 0.88834 0.95692 1.20333 0.79259 0.81157 0.88695 1.90724 1.38263 1.63724 1.45906 1.45638 1.58096 1.13640 1.19383 1.21749 0.95067 0.93722 0.87378 0.87167 1.23556 0.96998 0.95296 1.02982 1.21117 0.97757 0.85483 1.00130 0.86351 1.22928 0.91740 0.96686 0.93460 1.70242 1.26837 0.98282 1.25265 1.22424 0.98103 0.99505 0.97472 1.22836 1.05297 0.84290 1.06452 1.43261 1.30796 1.10356 1.32479 1.23386 0.98795 0.93261 1.01644 1.18796 0.95531 0.93410 0.88818 1.20289 0.97506 0.94328 0.96505 1.25140 0.96296 1.06823 0.89411 1.86709 1.21096 1.41439 1.84498 0.92936 0.75313 0.78867 0.89525 1.20822 0.97790 0.98997 0.90872 1.19980 1.05775 0.99215 0.92772 1.18243 0.75872 0.77913 0.82606 1.93250 1.40923 1.88194 1.93134 1.93212 1.70078 1.95466 1.56728 1.93221 1.96115 1.34395 1.91855 1.20874 0.93896 0.92178 1.00467 1.21690 1.01254 1.01195 0.92361 0.94889 0.88246 0.90513 0.90762 0.87185 0.76187 0.89471 0.89893 0.81148 0.80436 0.74395 0.89558 0.88396 0.89780 0.78368 1.17114 1.17390 0.84368 0.84026 0.84498 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.03 8.75 60.07 0.53 0.50 16 2 N -0.49 0.74 3.22 -180.32 -0.58 0.15 16 3 C 0.04 -0.12 5.03 -4.98 -0.03 -0.14 16 4 C 0.52 -0.91 7.52 -10.99 -0.08 -0.99 16 5 O -0.51 -0.99 13.95 5.56 0.08 -0.91 16 6 N -0.71 2.77 5.26 -53.02 -0.28 2.49 16 7 C 0.13 -0.41 4.29 -67.12 -0.29 -0.70 16 8 H 0.11 -0.19 7.50 -51.93 -0.39 -0.57 16 9 C -0.15 0.55 7.37 -25.78 -0.19 0.36 16 10 C -0.02 0.07 4.18 -90.82 -0.38 -0.31 16 11 H 0.12 -0.35 8.14 -51.92 -0.42 -0.78 16 12 C 0.22 0.07 7.37 -155.42 -1.14 -1.07 16 13 N -0.49 -1.59 11.25 -10.82 -0.12 -1.71 16 14 C -0.03 -0.04 11.87 -17.81 -0.21 -0.25 16 15 C -0.06 0.04 12.04 -16.56 -0.20 -0.16 16 16 N -0.57 0.81 5.94 -10.23 -0.06 0.75 16 17 C -0.13 0.45 7.37 -25.92 -0.19 0.26 16 18 C 0.13 -0.09 4.62 -83.79 -0.39 -0.48 16 19 C -0.08 -0.07 5.28 -104.42 -0.55 -0.62 16 20 C -0.07 -0.04 2.30 36.00 0.08 0.04 16 21 O -0.53 -0.98 12.65 -35.23 -0.45 -1.43 16 22 Si 0.74 0.11 30.41 -169.99 -5.17 -5.06 16 23 C -0.07 -0.11 8.01 -39.61 -0.32 -0.43 16 24 C -0.18 -0.21 5.45 -104.59 -0.57 -0.78 16 25 C 0.51 1.06 3.36 36.00 0.12 1.19 16 26 F -0.17 -0.46 17.30 2.25 0.04 -0.42 16 27 F -0.17 -0.37 16.46 2.25 0.04 -0.33 16 28 F -0.17 -0.56 16.46 2.25 0.04 -0.52 16 29 C -0.06 0.04 9.39 -39.61 -0.37 -0.33 16 30 C -0.15 0.25 8.66 -39.38 -0.34 -0.09 16 31 H 0.03 -0.09 7.34 -51.93 -0.38 -0.47 16 32 H 0.10 -0.04 5.82 -51.93 -0.30 -0.34 16 33 H 0.08 -0.12 7.42 -51.93 -0.39 -0.51 16 34 H 0.07 -0.38 7.48 -51.93 -0.39 -0.77 16 35 H 0.11 -0.46 8.06 -51.93 -0.42 -0.88 16 36 H 0.40 -2.46 8.70 -40.82 -0.36 -2.82 16 37 H 0.09 -0.40 6.65 -51.93 -0.35 -0.74 16 38 H 0.08 -0.27 8.14 -51.93 -0.42 -0.69 16 39 H 0.17 -0.05 8.06 -52.49 -0.42 -0.47 16 40 H 0.18 -0.65 8.06 -52.49 -0.42 -1.07 16 41 H 0.42 -1.76 7.54 -40.82 -0.31 -2.06 16 42 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 43 H 0.10 -0.29 8.10 -51.93 -0.42 -0.72 16 44 H 0.08 0.01 7.78 -51.93 -0.40 -0.40 16 45 H 0.37 0.19 7.51 45.56 0.34 0.53 16 46 H -0.25 -0.32 7.11 56.52 0.40 0.09 16 47 H -0.25 -0.65 6.81 56.52 0.38 -0.27 16 48 H 0.14 0.27 4.48 -52.49 -0.23 0.04 16 49 H 0.14 -0.32 7.60 -52.48 -0.40 -0.72 16 50 H 0.14 -0.52 7.14 -52.49 -0.37 -0.90 16 LS Contribution 419.33 15.07 6.32 6.32 Total: 0.00 -9.20 419.33 -10.76 -19.96 By element: Atomic # 1 Polarization: -9.16 SS G_CDS: -6.09 Total: -15.25 kcal Atomic # 6 Polarization: 0.49 SS G_CDS: -4.52 Total: -4.04 kcal Atomic # 7 Polarization: 2.73 SS G_CDS: -1.04 Total: 1.68 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.37 Total: -2.34 kcal Atomic # 9 Polarization: -1.39 SS G_CDS: 0.11 Total: -1.28 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: -5.17 Total: -5.06 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -9.20 -10.76 -19.96 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_6406254.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -56.605 kcal (2) G-P(sol) polarization free energy of solvation -9.195 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -65.801 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.761 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.956 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.561 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.47 seconds