Wall clock time and date at job start Sun Mar 7 2021 06:22:24 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38232 * 119.94053 * 300.00214 * 4 2 1 6 6 C 1.38196 * 120.07537 * 179.97438 * 5 4 2 7 7 C 1.38662 * 119.95869 * 0.02562 * 6 5 4 8 8 O 1.35927 * 120.05887 * 179.97438 * 7 6 5 9 9 C 1.42896 * 117.00169 * 0.02562 * 8 7 6 10 10 C 1.53000 * 109.47421 * 179.97438 * 9 8 7 11 11 N 1.46496 * 109.47251 * 179.97438 * 10 9 8 12 12 C 1.34818 * 126.59201 * 124.71363 * 11 10 9 13 13 C 1.36596 * 106.84066 * 179.90648 * 12 11 10 14 14 C 1.47516 * 125.77057 * 180.13318 * 13 12 11 15 15 O 1.21595 * 120.00275 * 0.24775 * 14 13 12 16 16 N 1.34783 * 120.00269 * 180.24482 * 14 13 12 17 17 C 1.46495 * 120.00303 * 180.02562 * 16 14 13 18 18 H 1.08995 * 112.85246 * 25.33421 * 17 16 14 19 19 C 1.53782 * 113.61453 * 156.52954 * 17 16 14 20 20 C 1.53785 * 87.08160 * 89.11634 * 19 17 16 21 21 H 1.09002 * 113.61046 * 270.88674 * 20 19 17 22 22 C 1.50695 * 113.61424 * 139.98363 * 20 19 17 23 23 N 1.30503 * 125.65065 * 94.69490 * 22 20 19 24 24 C 1.34125 * 109.25332 * 179.89183 * 23 22 20 25 25 C 1.34664 * 108.02376 * 0.36423 * 24 23 22 26 26 N 1.35044 * 125.65068 * 274.99478 * 22 20 19 27 27 C 1.53785 * 113.61027 * 254.13469 * 17 16 14 28 28 N 1.34398 * 108.45678 * 0.36628 * 13 12 11 29 29 N 1.28758 * 109.52534 * 359.76983 * 28 13 12 30 30 C 1.38852 * 119.88103 * 0.02562 * 7 6 5 31 31 Cl 1.73604 * 120.03790 * 180.02562 * 30 7 6 32 32 C 1.38212 * 119.92193 * 359.70089 * 30 7 6 33 33 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 34 34 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 35 35 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 36 36 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 37 37 H 1.07995 * 119.96202 * 359.97438 * 5 4 2 38 38 H 1.08007 * 120.02072 * 180.02562 * 6 5 4 39 39 H 1.09001 * 109.47049 * 299.99844 * 9 8 7 40 40 H 1.09005 * 109.47423 * 59.99916 * 9 8 7 41 41 H 1.09001 * 109.47337 * 300.00226 * 10 9 8 42 42 H 1.09008 * 109.46936 * 59.99939 * 10 9 8 43 43 H 1.08000 * 126.58014 * 0.04387 * 12 11 10 44 44 H 0.97008 * 119.99467 * 0.02562 * 16 14 13 45 45 H 1.08997 * 113.61527 * 203.66181 * 19 17 16 46 46 H 1.08994 * 113.61219 * 334.48469 * 19 17 16 47 47 H 1.08005 * 125.99161 * 180.11201 * 24 23 22 48 48 H 1.08009 * 126.59518 * 179.81126 * 25 24 23 49 49 H 0.97000 * 126.39502 * 359.97438 * 26 22 20 50 50 H 1.09000 * 113.61659 * 25.43675 * 27 17 16 51 51 H 1.09010 * 113.60957 * 156.33671 * 27 17 16 52 52 H 1.08005 * 119.97640 * 180.29444 * 32 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0337 -1.4482 6 6 2.0551 -2.6876 -2.5759 7 6 2.8524 -2.0156 -3.4899 8 8 3.3051 -2.6570 -4.5996 9 6 2.9202 -4.0236 -4.7614 10 6 3.5193 -4.5721 -6.0579 11 7 3.1252 -5.9733 -6.2235 12 6 2.4970 -6.5110 -7.2883 13 6 2.3287 -7.8396 -7.0192 14 6 1.6868 -8.8252 -7.9095 15 8 1.2561 -8.4770 -8.9920 16 7 1.5778 -10.1119 -7.5232 17 6 0.9409 -11.0908 -8.4076 18 1 0.9948 -10.8093 -9.4592 19 6 1.3744 -12.5409 -8.1351 20 6 0.2140 -12.6157 -7.1287 21 1 0.4892 -12.3041 -6.1211 22 6 -0.5247 -13.9289 -7.1555 23 7 -0.2915 -14.9488 -6.3754 24 6 -1.1401 -15.9418 -6.6801 25 6 -1.9237 -15.5243 -7.6926 26 7 -1.5337 -14.2475 -7.9947 27 6 -0.4679 -11.5069 -7.9526 28 7 2.8422 -8.0959 -5.8039 29 7 3.3233 -7.0119 -5.3026 30 6 3.1885 -0.6866 -3.2690 31 17 4.1860 0.1589 -4.4110 32 6 2.7225 -0.0357 -2.1423 33 1 -0.3934 0.4418 -0.7650 34 1 1.7923 -0.5138 0.8899 35 1 1.5616 2.4678 1.2086 36 1 3.5346 1.7703 -0.0322 37 1 0.9759 -2.5572 -0.7361 38 1 1.7927 -3.7216 -2.7453 39 1 3.2862 -4.6066 -3.9164 40 1 1.8332 -4.0921 -4.8065 41 1 3.1530 -3.9890 -6.9028 42 1 4.6063 -4.5037 -6.0133 43 1 2.1882 -5.9915 -8.1834 44 1 1.9211 -10.3897 -6.6595 45 1 1.2515 -13.2019 -8.9930 46 1 2.3590 -12.6231 -7.6750 47 1 -1.1844 -16.9085 -6.2004 48 1 -2.7092 -16.0883 -8.1737 49 1 -1.9114 -13.6779 -8.6829 50 1 -0.9702 -10.7549 -7.3441 51 1 -1.0936 -11.8858 -8.7609 52 1 2.9794 0.9994 -1.9720 There are 78 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 78 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_7143556.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:22:24 Heat of formation + Delta-G solvation = 113.509851 kcal Electronic energy + Delta-G solvation = -38445.645483 eV Core-core repulsion = 33056.793970 eV Total energy + Delta-G solvation = -5388.851513 eV No. of doubly occupied orbitals = 78 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 445.135 amu Computer time = 1.84 seconds Orbital eigenvalues (eV) -43.37014 -43.07633 -41.53153 -41.02994 -39.48294 -39.15422 -37.76601 -37.08523 -36.16079 -34.48993 -33.42763 -32.51003 -32.18549 -31.93472 -30.81180 -30.30231 -26.82730 -26.80078 -26.44803 -25.77710 -24.69169 -23.98424 -22.86390 -22.58872 -22.43443 -21.74759 -21.63882 -20.45902 -19.83353 -19.18151 -18.82012 -18.33710 -17.84547 -17.52155 -17.25236 -17.06181 -16.93785 -16.63738 -16.26228 -16.07386 -15.96217 -15.83125 -15.70184 -15.56956 -15.47335 -15.35140 -15.11709 -14.91585 -14.82074 -14.53738 -14.42870 -14.32290 -13.81984 -13.77044 -13.56597 -13.42445 -13.38561 -13.16703 -12.63008 -12.57300 -12.50540 -12.36489 -12.30871 -11.98396 -11.95771 -11.89033 -11.83479 -11.50438 -11.49235 -11.33743 -11.02505 -10.99987 -10.51850 -10.48765 -10.12266 -10.07224 -9.34204 -9.33308 -5.03762 -0.02694 0.01852 0.02772 0.52132 0.72072 1.07248 1.10944 1.27501 1.59502 1.92726 1.93895 1.99753 2.11833 2.15895 2.24142 2.37033 3.08362 3.20536 3.28867 3.39597 3.46603 3.46838 3.54088 3.59438 3.68421 3.75642 3.77289 3.79392 3.87718 3.97052 4.04151 4.07112 4.10163 4.26052 4.28205 4.41309 4.43255 4.44477 4.53975 4.56149 4.59314 4.62404 4.65972 4.68037 4.76264 4.82440 4.89290 4.97282 4.99773 5.04806 5.15882 5.24512 5.27479 5.41658 5.47865 5.80410 5.99011 6.32072 6.50965 6.75267 6.79121 7.05058 7.15378 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.061 4.061 3 Si 0.758 3.242 4 C -0.142 4.142 5 C -0.049 4.049 6 C -0.194 4.194 7 C 0.138 3.862 8 O -0.304 6.304 9 C 0.047 3.953 10 C 0.124 3.876 11 N -0.351 5.351 12 C 0.121 3.879 13 C -0.125 4.125 14 C 0.612 3.388 15 O -0.561 6.561 16 N -0.693 5.693 17 C 0.125 3.875 18 H 0.107 0.893 19 C -0.123 4.123 20 C -0.027 4.027 21 H 0.115 0.885 22 C 0.210 3.790 23 N -0.533 5.533 24 C -0.064 4.064 25 C -0.043 4.043 26 N -0.556 5.556 27 C -0.138 4.138 28 N -0.216 5.216 29 N -0.085 5.085 30 C -0.076 4.076 31 Cl -0.056 7.056 32 C -0.073 4.073 33 H 0.396 0.604 34 H 0.114 0.886 35 H -0.295 1.295 36 H -0.285 1.285 37 H 0.145 0.855 38 H 0.153 0.847 39 H 0.078 0.922 40 H 0.083 0.917 41 H 0.152 0.848 42 H 0.122 0.878 43 H 0.240 0.760 44 H 0.415 0.585 45 H 0.104 0.896 46 H 0.085 0.915 47 H 0.176 0.824 48 H 0.210 0.790 49 H 0.432 0.568 50 H 0.080 0.920 51 H 0.106 0.894 52 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.647 3.280 -4.820 6.877 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.172 4.172 3 Si 0.665 3.335 4 C -0.143 4.143 5 C -0.067 4.067 6 C -0.213 4.213 7 C 0.092 3.908 8 O -0.216 6.216 9 C -0.029 4.029 10 C 0.003 3.997 11 N -0.136 5.136 12 C -0.036 4.036 13 C -0.264 4.264 14 C 0.397 3.603 15 O -0.439 6.439 16 N -0.343 5.343 17 C 0.019 3.981 18 H 0.125 0.875 19 C -0.162 4.162 20 C -0.047 4.047 21 H 0.133 0.867 22 C -0.054 4.054 23 N -0.254 5.254 24 C -0.211 4.211 25 C -0.177 4.177 26 N -0.161 5.161 27 C -0.177 4.177 28 N -0.090 5.090 29 N -0.065 5.065 30 C -0.103 4.103 31 Cl -0.027 7.027 32 C -0.091 4.091 33 H 0.246 0.754 34 H 0.131 0.869 35 H -0.223 1.223 36 H -0.212 1.212 37 H 0.163 0.837 38 H 0.170 0.830 39 H 0.097 0.903 40 H 0.101 0.899 41 H 0.170 0.830 42 H 0.140 0.860 43 H 0.256 0.744 44 H 0.252 0.748 45 H 0.122 0.878 46 H 0.104 0.896 47 H 0.193 0.807 48 H 0.226 0.774 49 H 0.273 0.727 50 H 0.099 0.901 51 H 0.124 0.876 52 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges -1.992 3.540 -2.871 4.974 hybrid contribution -0.735 -0.503 -0.839 1.223 sum -2.727 3.037 -3.710 5.516 Atomic orbital electron populations 1.86483 1.16906 1.82049 1.50605 1.24968 0.85416 1.10014 0.96785 0.93917 0.78254 0.76051 0.85323 1.20246 1.00872 0.95485 0.97730 1.21096 0.96154 0.93428 0.96046 1.21457 1.01968 1.01881 0.95964 1.18671 0.94438 0.90480 0.87251 1.85995 1.70586 1.25560 1.39490 1.22965 1.00999 0.80248 0.98724 1.21923 1.03732 0.73800 1.00210 1.50361 1.39600 1.10555 1.13092 1.23941 0.92093 0.93534 0.94072 1.21472 1.13979 0.95053 0.95896 1.16796 0.77444 0.81781 0.84232 1.90823 1.50508 1.79825 1.22731 1.45443 1.59632 1.07252 1.21967 1.21814 0.92974 0.87867 0.95411 0.87471 1.23333 0.98711 0.94795 0.99328 1.21171 0.95646 0.86742 1.01116 0.86728 1.23227 0.92689 0.97678 0.91819 1.70181 1.26874 1.01507 1.26809 1.22737 0.97293 1.00347 1.00755 1.23280 1.05088 0.86840 1.02521 1.43255 1.28576 1.14072 1.30179 1.23543 0.96985 0.97145 1.00006 1.74630 1.07244 1.19658 1.07476 1.82011 1.22059 0.89214 1.13205 1.20204 1.03281 0.91215 0.95644 1.98390 1.67881 1.76852 1.59609 1.20913 0.96414 1.00299 0.91511 0.75365 0.86866 1.22287 1.21151 0.83726 0.82983 0.90347 0.89886 0.83011 0.85985 0.74391 0.74766 0.87805 0.89597 0.80664 0.77363 0.72681 0.90123 0.87575 0.82955 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.38 12.77 -148.98 -1.90 -0.52 16 2 C -0.06 0.18 2.82 71.24 0.20 0.38 16 3 Si 0.76 -2.40 29.78 68.60 2.04 -0.35 16 4 C -0.14 0.35 5.39 -19.85 -0.11 0.24 16 5 C -0.05 0.13 9.60 22.26 0.21 0.34 16 6 C -0.19 0.55 9.04 22.36 0.20 0.75 16 7 C 0.14 -0.11 6.68 22.52 0.15 0.04 16 8 O -0.30 0.84 9.60 -92.72 -0.89 -0.05 16 9 C 0.05 -0.34 4.94 71.98 0.36 0.02 16 10 C 0.12 -1.24 6.91 86.38 0.60 -0.64 16 11 N -0.35 1.56 3.69 -347.09 -1.28 0.27 16 12 C 0.12 -0.55 11.27 83.85 0.95 0.40 16 13 C -0.12 -0.15 6.99 40.81 0.29 0.14 16 14 C 0.61 1.66 7.82 86.69 0.68 2.34 16 15 O -0.56 -4.15 16.48 -4.02 -0.07 -4.22 16 16 N -0.69 0.66 5.26 -443.21 -2.33 -1.68 16 17 C 0.12 -0.38 4.30 45.52 0.20 -0.19 16 18 H 0.11 -0.17 7.50 -2.39 -0.02 -0.19 16 19 C -0.12 0.46 7.37 31.12 0.23 0.68 16 20 C -0.03 0.05 4.18 -10.92 -0.05 0.00 16 21 H 0.11 -0.09 8.14 -2.39 -0.02 -0.11 16 22 C 0.21 0.65 7.36 138.13 1.02 1.66 16 23 N -0.53 -5.13 11.25 -188.13 -2.12 -7.25 16 24 C -0.06 -0.35 11.87 83.52 0.99 0.64 16 25 C -0.04 0.03 12.04 83.09 1.00 1.03 16 26 N -0.56 1.15 5.94 -186.27 -1.11 0.05 16 27 C -0.14 0.68 7.37 31.21 0.23 0.91 16 28 N -0.22 -0.83 12.04 -50.00 -0.60 -1.43 16 29 N -0.08 -0.22 13.65 37.02 0.51 0.28 16 30 C -0.08 -0.03 6.33 22.41 0.14 0.11 16 31 Cl -0.06 -0.07 28.51 -2.72 -0.08 -0.15 16 32 C -0.07 0.13 8.45 22.28 0.19 0.32 16 33 H 0.40 -4.09 8.70 -74.05 -0.64 -4.74 16 34 H 0.11 -0.25 7.96 -2.39 -0.02 -0.27 16 35 H -0.30 -1.28 7.11 99.48 0.71 -0.57 16 36 H -0.28 -0.53 7.11 99.48 0.71 0.18 16 37 H 0.14 -0.61 8.06 -2.91 -0.02 -0.63 16 38 H 0.15 -0.91 6.30 -2.91 -0.02 -0.93 16 39 H 0.08 -0.44 7.66 -2.39 -0.02 -0.46 16 40 H 0.08 -0.71 7.66 -2.38 -0.02 -0.73 16 41 H 0.15 -2.39 8.08 -2.39 -0.02 -2.41 16 42 H 0.12 -1.30 8.14 -2.38 -0.02 -1.32 16 43 H 0.24 -2.75 8.06 -2.91 -0.02 -2.78 16 44 H 0.42 -0.95 8.39 -92.70 -0.78 -1.73 16 45 H 0.10 -0.47 8.09 -2.39 -0.02 -0.48 16 46 H 0.09 -0.27 8.14 -2.39 -0.02 -0.29 16 47 H 0.18 0.39 8.06 -2.91 -0.02 0.36 16 48 H 0.21 -1.70 8.06 -2.91 -0.02 -1.72 16 49 H 0.43 -3.69 7.53 -92.71 -0.70 -4.39 16 50 H 0.08 -0.28 8.14 -2.39 -0.02 -0.30 16 51 H 0.11 -0.92 6.65 -2.38 -0.02 -0.94 16 52 H 0.15 -0.69 4.88 -2.91 -0.01 -0.71 16 Total: 0.00 -29.60 458.11 -1.40 -31.00 By element: Atomic # 1 Polarization: -24.11 SS G_CDS: -1.04 Total: -25.15 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: 7.47 Total: 9.20 kcal Atomic # 7 Polarization: -2.82 SS G_CDS: -6.93 Total: -9.75 kcal Atomic # 8 Polarization: -1.94 SS G_CDS: -2.86 Total: -4.80 kcal Atomic # 14 Polarization: -2.40 SS G_CDS: 2.04 Total: -0.35 kcal Atomic # 17 Polarization: -0.07 SS G_CDS: -0.08 Total: -0.15 kcal Total: -29.60 -1.40 -31.00 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_7143556.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 144.509 kcal (2) G-P(sol) polarization free energy of solvation -29.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 114.905 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.395 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.999 kcal (6) G-S(sol) free energy of system = (1) + (5) 113.510 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.84 seconds