Wall clock time and date at job start Sun Mar 7 2021 06:22:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50697 * 1 3 3 C 1.37932 * 120.07296 * 2 1 4 4 C 1.38386 * 120.14423 * 179.74661 * 3 2 1 5 5 C 1.50702 * 119.85146 * 180.29474 * 4 3 2 6 6 C 1.38331 * 120.29229 * 0.54992 * 4 3 2 7 7 C 1.50695 * 119.92871 * 179.72244 * 6 4 3 8 8 O 1.42898 * 109.47333 * 284.72396 * 7 6 4 9 9 Si 1.86300 * 109.47327 * 164.72571 * 7 6 4 10 10 C 1.37982 * 120.14268 * 359.44883 * 6 4 3 11 11 C 1.39553 * 119.85303 * 0.27434 * 10 6 4 12 12 C 1.47847 * 120.14292 * 179.97438 * 11 10 6 13 13 O 1.21554 * 120.00119 * 173.75028 * 12 11 10 14 14 N 1.34782 * 120.00231 * 353.74351 * 12 11 10 15 15 C 1.46497 * 120.00180 * 180.02562 * 14 12 11 16 16 H 1.09006 * 112.84862 * 336.19965 * 15 14 12 17 17 C 1.53779 * 113.61398 * 107.50656 * 15 14 12 18 18 C 1.53784 * 87.08102 * 89.11566 * 17 15 14 19 19 H 1.08997 * 113.61398 * 270.88487 * 18 17 15 20 20 C 1.50700 * 113.61105 * 139.97886 * 18 17 15 21 21 N 1.30506 * 125.64380 * 167.19180 * 20 18 17 22 22 C 1.34129 * 109.25189 * 179.89673 * 21 20 18 23 23 C 1.34668 * 108.02349 * 0.37150 * 22 21 20 24 24 N 1.35039 * 125.65292 * 347.50523 * 20 18 17 25 25 C 1.53777 * 87.08184 * 25.43329 * 18 17 15 26 26 H 1.09007 * 109.47439 * 263.39198 * 1 2 3 27 27 H 1.08996 * 109.47277 * 23.38956 * 1 2 3 28 28 H 1.09006 * 109.47406 * 143.39344 * 1 2 3 29 29 H 1.08001 * 119.92921 * 0.02562 * 3 2 1 30 30 H 1.09000 * 109.46919 * 270.24755 * 5 4 3 31 31 H 1.08996 * 109.47586 * 30.25499 * 5 4 3 32 32 H 1.09001 * 109.46480 * 150.25663 * 5 4 3 33 33 H 1.09001 * 109.47047 * 44.72757 * 7 6 4 34 34 H 0.96703 * 113.99679 * 60.00294 * 8 7 6 35 35 H 1.48502 * 110.00008 * 300.00328 * 9 7 6 36 36 H 1.48500 * 110.00156 * 61.31841 * 9 7 6 37 37 H 1.08001 * 120.07170 * 180.25481 * 10 6 4 38 38 H 0.97000 * 119.99636 * 0.02562 * 14 12 11 39 39 H 1.08999 * 113.61701 * 203.66553 * 17 15 14 40 40 H 1.08996 * 113.61572 * 334.56519 * 17 15 14 41 41 H 1.07999 * 125.98960 * 180.12007 * 22 21 20 42 42 H 1.08002 * 126.59513 * 179.74820 * 23 22 21 43 43 H 0.96993 * 126.39972 * 359.97438 * 24 20 18 44 44 H 1.08998 * 113.61588 * 220.02119 * 25 18 17 45 45 H 1.09003 * 113.61715 * 89.11133 * 25 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1982 1.1937 0.0000 4 6 3.5820 1.1954 0.0053 5 6 4.3305 2.5034 0.0120 6 6 4.2813 0.0018 -0.0009 7 6 5.7882 0.0133 -0.0013 8 8 6.2615 0.3658 -1.3028 9 14 6.4223 -1.6785 0.4528 10 6 3.6020 -1.1992 -0.0008 11 6 2.2065 -1.2080 -0.0004 12 6 1.4722 -2.4912 -0.0009 13 8 0.2621 -2.4990 0.1140 14 7 2.1444 -3.6524 -0.1291 15 6 1.4167 -4.9238 -0.1302 16 1 0.4518 -4.8597 0.3730 17 6 1.3494 -5.5938 -1.5127 18 6 2.6724 -6.2902 -1.1525 19 1 3.5571 -5.7177 -1.4312 20 6 2.7390 -7.7278 -1.5995 21 7 3.8154 -8.4650 -1.6321 22 6 3.4997 -9.6891 -2.0806 23 6 2.1791 -9.7088 -2.3433 24 7 1.6960 -8.4648 -2.0383 25 6 2.2687 -6.1216 0.3217 26 1 -0.3634 -0.1183 1.0209 27 1 -0.3633 0.9432 -0.4079 28 1 -0.3634 -0.8250 -0.6128 29 1 1.6582 2.1290 0.0004 30 1 4.5110 2.8239 -1.0141 31 1 3.7386 3.2581 0.5297 32 1 5.2834 2.3739 0.5251 33 1 6.1462 0.7426 0.7253 34 1 5.9694 1.2367 -1.6049 35 1 5.9371 -2.0569 1.8043 36 1 5.9675 -2.6770 -0.5480 37 1 4.1491 -2.1304 -0.0015 38 1 3.1101 -3.6461 -0.2205 39 1 0.5106 -6.2809 -1.6246 40 1 1.4368 -4.8926 -2.3425 41 1 4.1853 -10.5131 -2.2121 42 1 1.6104 -10.5451 -2.7223 43 1 0.7763 -8.1681 -2.1219 44 1 3.0984 -5.8464 0.9729 45 1 1.6813 -6.9530 0.7115 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_9599494.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:22:30 Heat of formation + Delta-G solvation = 44.917246 kcal Electronic energy + Delta-G solvation = -27697.185624 eV Core-core repulsion = 23875.873089 eV Total energy + Delta-G solvation = -3821.312535 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.157 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.11027 -41.83311 -40.65066 -39.25082 -37.59730 -35.00138 -34.38900 -33.44287 -33.21030 -30.67666 -29.33130 -28.69711 -27.00425 -26.33293 -25.51980 -23.90683 -23.07148 -22.35918 -21.77193 -21.09614 -20.49390 -19.22289 -18.80027 -18.30276 -17.31636 -16.79777 -16.54325 -16.43799 -16.30351 -15.98512 -15.62152 -15.54749 -15.26077 -14.99183 -14.82509 -14.64615 -14.54879 -14.46694 -14.09516 -13.85653 -13.72331 -13.59972 -13.48876 -13.02878 -12.85958 -12.74589 -12.64327 -12.55757 -12.19530 -12.00918 -11.65470 -11.35259 -11.15552 -10.96985 -10.95362 -10.65946 -10.27595 -9.98594 -9.68665 -9.34071 -4.89871 -0.32718 0.10024 1.07388 1.27410 1.57077 1.70472 1.84998 1.88805 2.12450 2.18895 2.59078 3.14345 3.26235 3.37595 3.40238 3.48653 3.49843 3.63074 3.68241 3.75296 3.92111 3.96796 4.04158 4.11041 4.29989 4.36442 4.38092 4.39828 4.43011 4.46328 4.47901 4.57503 4.61604 4.64691 4.71605 4.78170 4.82186 4.85848 4.88048 4.92233 5.00062 5.13964 5.20103 5.32673 5.40129 5.49744 5.72178 5.80797 6.30593 6.36702 6.43376 7.07735 7.15697 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.123 4.123 2 C -0.010 4.010 3 C -0.127 4.127 4 C -0.040 4.040 5 C -0.130 4.130 6 C -0.128 4.128 7 C -0.083 4.083 8 O -0.532 6.532 9 Si 0.741 3.259 10 C -0.077 4.077 11 C -0.144 4.144 12 C 0.565 3.435 13 O -0.522 6.522 14 N -0.713 5.713 15 C 0.125 3.875 16 H 0.113 0.887 17 C -0.149 4.149 18 C -0.027 4.027 19 H 0.118 0.882 20 C 0.218 3.782 21 N -0.486 5.486 22 C -0.027 4.027 23 C -0.056 4.056 24 N -0.565 5.565 25 C -0.133 4.133 26 H 0.079 0.921 27 H 0.061 0.939 28 H 0.096 0.904 29 H 0.135 0.865 30 H 0.080 0.920 31 H 0.076 0.924 32 H 0.075 0.925 33 H 0.078 0.922 34 H 0.363 0.637 35 H -0.246 1.246 36 H -0.251 1.251 37 H 0.123 0.877 38 H 0.400 0.600 39 H 0.089 0.911 40 H 0.084 0.916 41 H 0.172 0.828 42 H 0.179 0.821 43 H 0.418 0.582 44 H 0.085 0.915 45 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.742 2.014 0.230 2.159 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.179 4.179 2 C -0.011 4.011 3 C -0.145 4.145 4 C -0.040 4.040 5 C -0.186 4.186 6 C -0.129 4.129 7 C -0.191 4.191 8 O -0.338 6.338 9 Si 0.639 3.361 10 C -0.095 4.095 11 C -0.147 4.147 12 C 0.353 3.647 13 O -0.400 6.400 14 N -0.365 5.365 15 C 0.019 3.981 16 H 0.131 0.869 17 C -0.189 4.189 18 C -0.047 4.047 19 H 0.136 0.864 20 C -0.046 4.046 21 N -0.206 5.206 22 C -0.175 4.175 23 C -0.189 4.189 24 N -0.169 5.169 25 C -0.172 4.172 26 H 0.097 0.903 27 H 0.080 0.920 28 H 0.115 0.885 29 H 0.153 0.847 30 H 0.099 0.901 31 H 0.095 0.905 32 H 0.094 0.906 33 H 0.096 0.904 34 H 0.211 0.789 35 H -0.171 1.171 36 H -0.175 1.175 37 H 0.140 0.860 38 H 0.235 0.765 39 H 0.107 0.893 40 H 0.103 0.897 41 H 0.189 0.811 42 H 0.196 0.804 43 H 0.256 0.744 44 H 0.103 0.897 45 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges 0.757 0.812 0.792 1.364 hybrid contribution -1.970 0.767 -0.656 2.213 sum -1.212 1.580 0.136 1.996 Atomic orbital electron populations 1.21126 0.89488 1.03402 1.03931 1.20096 0.97114 0.91173 0.92706 1.21025 0.93250 0.97915 1.02317 1.20002 0.93758 0.94906 0.95354 1.21011 1.00653 0.93757 1.03203 1.20049 0.96263 0.92781 1.03796 1.25311 0.91078 1.14118 0.88617 1.86792 1.75268 1.39926 1.31805 0.92899 0.91771 0.72301 0.79154 1.21071 0.93260 0.97445 0.97727 1.19614 0.92926 0.93298 1.08839 1.18223 0.87099 0.83457 0.75877 1.90750 1.13437 1.86919 1.48869 1.45636 1.10698 1.05211 1.74914 1.21790 0.97312 0.82299 0.96701 0.86882 1.23521 0.96598 0.99742 0.98991 1.21070 0.99747 0.87236 0.96614 0.86435 1.22883 0.83025 0.95717 1.03016 1.70251 1.27020 1.03591 1.19697 1.22424 0.93968 0.96060 1.05023 1.22832 0.97027 0.89103 1.09953 1.43261 1.11653 1.11343 1.50618 1.23414 1.00489 0.97684 0.95609 0.90286 0.92009 0.88541 0.84719 0.90108 0.90500 0.90637 0.90403 0.78939 1.17065 1.17530 0.85964 0.76460 0.89299 0.89732 0.81125 0.80432 0.74398 0.89675 0.88197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 -0.21 8.73 36.00 0.31 0.10 16 2 C -0.01 -0.02 5.91 -104.23 -0.62 -0.64 16 3 C -0.13 -0.07 9.31 -39.64 -0.37 -0.44 16 4 C -0.04 0.00 5.87 -104.53 -0.61 -0.62 16 5 C -0.13 0.35 8.74 36.01 0.31 0.66 16 6 C -0.13 -0.11 5.26 -104.68 -0.55 -0.66 16 7 C -0.08 0.04 2.09 36.00 0.08 0.12 16 8 O -0.53 -0.05 12.65 -35.23 -0.45 -0.49 16 9 Si 0.74 -0.65 30.40 -169.99 -5.17 -5.81 16 10 C -0.08 -0.12 8.13 -39.19 -0.32 -0.44 16 11 C -0.14 -0.35 5.87 -104.97 -0.62 -0.97 16 12 C 0.56 1.59 7.70 -12.33 -0.09 1.50 16 13 O -0.52 -2.64 12.95 5.32 0.07 -2.57 16 14 N -0.71 -0.30 5.21 -53.96 -0.28 -0.58 16 15 C 0.12 -0.07 4.32 -67.12 -0.29 -0.36 16 16 H 0.11 0.04 7.46 -51.93 -0.39 -0.35 16 17 C -0.15 0.22 7.35 -25.92 -0.19 0.03 16 18 C -0.03 0.01 4.17 -90.96 -0.38 -0.37 16 19 H 0.12 -0.03 8.14 -51.93 -0.42 -0.45 16 20 C 0.22 0.40 7.36 -155.41 -1.14 -0.75 16 21 N -0.49 -2.19 11.25 -10.82 -0.12 -2.31 16 22 C -0.03 -0.07 11.87 -17.81 -0.21 -0.28 16 23 C -0.06 -0.01 12.04 -16.56 -0.20 -0.21 16 24 N -0.56 0.15 5.94 -10.22 -0.06 0.09 16 25 C -0.13 0.16 7.38 -25.92 -0.19 -0.03 16 26 H 0.08 0.16 8.14 -51.92 -0.42 -0.27 16 27 H 0.06 0.00 8.04 -51.93 -0.42 -0.41 16 28 H 0.10 0.32 5.86 -51.93 -0.30 0.01 16 29 H 0.13 -0.18 8.06 -52.49 -0.42 -0.60 16 30 H 0.08 -0.30 7.78 -51.93 -0.40 -0.71 16 31 H 0.08 -0.24 8.08 -51.93 -0.42 -0.66 16 32 H 0.07 -0.25 6.21 -51.93 -0.32 -0.57 16 33 H 0.08 -0.17 6.46 -51.93 -0.34 -0.51 16 34 H 0.36 -0.92 7.75 45.56 0.35 -0.57 16 35 H -0.25 -0.14 7.11 56.52 0.40 0.26 16 36 H -0.25 -0.24 6.81 56.52 0.38 0.14 16 37 H 0.12 0.06 3.32 -52.49 -0.17 -0.11 16 38 H 0.40 -0.33 6.77 -40.82 -0.28 -0.61 16 39 H 0.09 -0.26 6.64 -51.93 -0.34 -0.61 16 40 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 41 H 0.17 0.09 8.06 -52.49 -0.42 -0.33 16 42 H 0.18 -0.51 8.06 -52.49 -0.42 -0.93 16 43 H 0.42 -1.28 7.53 -40.82 -0.31 -1.59 16 44 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 45 H 0.10 -0.15 8.09 -51.93 -0.42 -0.57 16 LS Contribution 361.18 15.07 5.44 5.44 Total: 0.00 -8.45 361.18 -11.58 -20.04 By element: Atomic # 1 Polarization: -4.50 SS G_CDS: -5.94 Total: -10.44 kcal Atomic # 6 Polarization: 1.73 SS G_CDS: -5.08 Total: -3.36 kcal Atomic # 7 Polarization: -2.34 SS G_CDS: -0.46 Total: -2.80 kcal Atomic # 8 Polarization: -2.69 SS G_CDS: -0.38 Total: -3.07 kcal Atomic # 14 Polarization: -0.65 SS G_CDS: -5.17 Total: -5.81 kcal Total LS contribution 5.44 Total: 5.44 kcal Total: -8.45 -11.58 -20.04 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_9599494.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 64.954 kcal (2) G-P(sol) polarization free energy of solvation -8.454 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 56.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.582 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.036 kcal (6) G-S(sol) free energy of system = (1) + (5) 44.917 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds