Wall clock time and date at job start Sun Mar 7 2021 06:22:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47317 * 2 1 4 4 C 1.50701 * 109.47101 * 120.00124 * 2 1 3 5 5 C 1.34237 * 126.49895 * 255.31312 * 4 2 1 6 6 N 1.36834 * 109.93690 * 180.16968 * 5 4 2 7 7 C 1.46506 * 125.06389 * 179.81801 * 6 5 4 8 8 C 1.50699 * 109.46928 * 264.69610 * 7 6 5 9 9 O 1.21282 * 120.00041 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00037 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00169 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84782 * 336.20020 * 11 10 8 13 13 C 1.53775 * 113.61422 * 107.50604 * 11 10 8 14 14 C 1.53773 * 87.08284 * 89.11809 * 13 11 10 15 15 H 1.09006 * 113.61101 * 270.88316 * 14 13 11 16 16 C 1.50698 * 113.61551 * 139.98210 * 14 13 11 17 17 N 1.30503 * 125.64838 * 167.52912 * 16 14 13 18 18 C 1.34128 * 109.25805 * 180.02562 * 17 16 14 19 19 C 1.34676 * 108.01514 * 359.97438 * 18 17 16 20 20 N 1.35041 * 125.65130 * 347.21738 * 16 14 13 21 21 C 1.53776 * 113.61596 * 205.00700 * 11 10 8 22 22 C 1.37691 * 109.87448 * 359.54938 * 6 5 4 23 23 C 1.39088 * 133.51300 * 180.23627 * 22 6 5 24 24 C 1.37788 * 119.77544 * 180.02562 * 23 22 6 25 25 C 1.38794 * 120.67120 * 0.02562 * 24 23 22 26 26 C 1.36662 * 120.52126 * 359.97438 * 25 24 23 27 27 C 1.39587 * 119.76822 * 0.02562 * 26 25 24 28 28 H 0.96699 * 113.99934 * 299.99752 * 1 2 3 29 29 H 1.08997 * 109.47031 * 239.99834 * 2 1 3 30 30 H 1.48499 * 110.00084 * 178.68209 * 3 2 1 31 31 H 1.48498 * 110.00070 * 300.00560 * 3 2 1 32 32 H 1.08004 * 125.03507 * 0.02562 * 5 4 2 33 33 H 1.09004 * 109.47073 * 24.69438 * 7 6 5 34 34 H 1.09000 * 109.47212 * 144.69521 * 7 6 5 35 35 H 0.96996 * 119.99844 * 0.02562 * 10 8 7 36 36 H 1.09006 * 113.61442 * 203.67118 * 13 11 10 37 37 H 1.09003 * 113.61654 * 334.56193 * 13 11 10 38 38 H 1.07999 * 125.99666 * 179.97438 * 18 17 16 39 39 H 1.08002 * 126.58528 * 180.02562 * 19 18 17 40 40 H 0.96996 * 126.39434 * 0.02562 * 20 16 14 41 41 H 1.09006 * 113.61349 * 25.42518 * 21 11 10 42 42 H 1.08997 * 113.61789 * 156.25508 * 21 11 10 43 43 H 1.08000 * 120.11311 * 0.05591 * 23 22 6 44 44 H 1.08001 * 119.66717 * 180.02562 * 24 23 22 45 45 H 1.07993 * 119.73902 * 179.97438 * 25 24 23 46 46 H 1.08005 * 120.11743 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4554 -0.1373 2.3253 6 7 2.8028 -1.0990 3.2346 7 6 3.4076 -0.8404 4.5437 8 6 4.9059 -0.9628 4.4378 9 8 5.4181 -1.2392 3.3738 10 7 5.6767 -0.7650 5.5256 11 6 7.1332 -0.8844 5.4228 12 1 7.4486 -1.5123 4.5895 13 6 7.8684 0.4644 5.4930 14 6 7.9071 0.2747 7.0185 15 1 7.0350 0.6805 7.5312 16 6 9.2085 0.7017 7.6470 17 7 9.4197 0.8610 8.9250 18 6 10.6898 1.2462 9.1188 19 6 11.2885 1.3281 7.9152 20 7 10.3509 0.9771 6.9817 21 6 7.8178 -1.2376 6.7537 22 6 2.4939 -2.3457 2.7384 23 6 2.6294 -3.6363 3.2391 24 6 2.2159 -4.7108 2.4821 25 6 1.6650 -4.5195 1.2227 26 6 1.5226 -3.2601 0.7114 27 6 1.9348 -2.1571 1.4610 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8899 30 1 3.5346 1.7702 0.0321 31 1 1.5614 2.4679 -1.2084 32 1 2.5859 0.9255 2.4667 33 1 3.1475 0.1660 4.8716 34 1 3.0339 -1.5660 5.2662 35 1 5.2670 -0.5442 6.3766 36 1 8.8532 0.4497 5.0259 37 1 7.2600 1.3105 5.1734 38 1 11.1515 1.4541 10.0727 39 1 12.3129 1.6116 7.7238 40 1 10.4817 0.9368 6.0215 41 1 7.1683 -1.7655 7.4522 42 1 8.7881 -1.7188 6.6315 43 1 3.0568 -3.7955 4.2180 44 1 2.3215 -5.7121 2.8728 45 1 1.3463 -5.3725 0.6421 46 1 1.0927 -3.1187 -0.2692 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16970406_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:22:33 Heat of formation + Delta-G solvation = 96.899291 kcal Electronic energy + Delta-G solvation = -30096.031874 eV Core-core repulsion = 25955.095258 eV Total energy + Delta-G solvation = -4140.936616 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -43.17257 -42.50882 -41.22506 -39.42956 -37.99872 -37.51405 -34.76984 -33.97115 -33.46737 -31.46998 -30.65588 -30.13345 -28.96491 -27.08506 -26.50130 -25.54217 -23.70116 -22.93696 -22.52757 -21.91430 -21.81588 -20.71040 -20.54042 -19.27384 -18.57457 -18.44197 -17.71121 -17.33348 -16.98688 -16.47466 -16.34312 -16.17657 -16.00089 -15.73278 -15.62917 -15.31886 -15.25371 -14.78183 -14.70251 -14.62305 -14.57558 -14.36270 -14.00307 -13.89638 -13.74109 -13.56722 -13.28450 -12.71247 -12.60199 -12.48206 -12.13773 -12.09316 -12.02548 -11.74144 -11.69060 -11.18839 -11.02918 -11.01940 -10.44284 -10.37247 -10.23734 -9.40111 -9.04216 -8.54740 -5.04138 0.26048 0.77218 1.01425 1.29476 1.34457 1.39935 1.64289 1.76190 1.98214 2.05139 2.08024 2.12971 3.07172 3.09401 3.18121 3.30829 3.40892 3.48240 3.56089 3.63506 3.73694 3.78952 3.83972 3.85212 4.05130 4.05401 4.29930 4.31426 4.34323 4.35546 4.42272 4.50799 4.56409 4.56733 4.63567 4.69920 4.74048 4.77894 4.82464 4.88667 4.97062 5.08195 5.23714 5.26113 5.63038 5.74922 5.79009 5.84440 5.88299 6.08301 6.27428 6.30743 6.34360 6.74682 6.91709 7.09268 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.542 6.542 2 C -0.028 4.028 3 Si 0.682 3.318 4 C -0.197 4.197 5 C 0.068 3.932 6 N -0.466 5.466 7 C 0.092 3.908 8 C 0.494 3.506 9 O -0.511 6.511 10 N -0.712 5.712 11 C 0.124 3.876 12 H 0.109 0.891 13 C -0.149 4.149 14 C -0.024 4.024 15 H 0.120 0.880 16 C 0.216 3.784 17 N -0.486 5.486 18 C -0.027 4.027 19 C -0.055 4.055 20 N -0.565 5.565 21 C -0.131 4.131 22 C 0.109 3.891 23 C -0.128 4.128 24 C -0.097 4.097 25 C -0.145 4.145 26 C -0.066 4.066 27 C -0.087 4.087 28 H 0.376 0.624 29 H 0.111 0.889 30 H -0.256 1.256 31 H -0.255 1.255 32 H 0.171 0.829 33 H 0.125 0.875 34 H 0.120 0.880 35 H 0.405 0.595 36 H 0.087 0.913 37 H 0.084 0.916 38 H 0.172 0.828 39 H 0.178 0.822 40 H 0.418 0.582 41 H 0.086 0.914 42 H 0.097 0.903 43 H 0.115 0.885 44 H 0.125 0.875 45 H 0.123 0.877 46 H 0.122 0.878 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.626 2.515 4.504 5.197 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.347 6.347 2 C -0.140 4.140 3 Si 0.584 3.416 4 C -0.205 4.205 5 C -0.056 4.056 6 N -0.150 5.150 7 C -0.034 4.034 8 C 0.278 3.722 9 O -0.384 6.384 10 N -0.365 5.365 11 C 0.019 3.981 12 H 0.127 0.873 13 C -0.188 4.188 14 C -0.044 4.044 15 H 0.138 0.862 16 C -0.048 4.048 17 N -0.206 5.206 18 C -0.175 4.175 19 C -0.189 4.189 20 N -0.169 5.169 21 C -0.171 4.171 22 C 0.004 3.996 23 C -0.148 4.148 24 C -0.116 4.116 25 C -0.164 4.164 26 C -0.084 4.084 27 C -0.091 4.091 28 H 0.223 0.777 29 H 0.128 0.872 30 H -0.181 1.181 31 H -0.179 1.179 32 H 0.188 0.812 33 H 0.143 0.857 34 H 0.138 0.862 35 H 0.240 0.760 36 H 0.105 0.895 37 H 0.102 0.898 38 H 0.189 0.811 39 H 0.196 0.804 40 H 0.256 0.744 41 H 0.105 0.895 42 H 0.116 0.884 43 H 0.133 0.867 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.140 0.860 Dipole moment (debyes) X Y Z Total from point charges 1.146 2.576 3.696 4.648 hybrid contribution 1.048 -0.278 -0.565 1.223 sum 2.195 2.298 3.130 4.461 Atomic orbital electron populations 1.86503 1.17500 1.81764 1.48917 1.24328 0.84639 1.08732 0.96303 0.95411 0.80923 0.77548 0.87726 1.20638 1.10095 0.92383 0.97356 1.21505 1.00989 0.93819 0.89306 1.43190 1.52527 1.04654 1.14615 1.21587 0.90420 1.06087 0.85329 1.21078 0.89594 0.77160 0.84353 1.90823 1.74611 1.45306 1.27686 1.45618 1.06198 1.72367 1.12297 1.21775 0.79534 0.97253 0.99573 0.87279 1.23511 1.01515 0.99260 0.94553 1.21062 0.92027 0.96769 0.94537 0.86233 1.22912 0.89523 1.04356 0.88040 1.70240 1.17512 1.18468 1.14355 1.22426 0.91080 1.05985 0.97993 1.22841 0.96600 1.09823 0.89596 1.43266 1.10619 1.52600 1.10426 1.23396 1.02062 0.95233 0.96376 1.18162 1.01215 0.85854 0.94341 1.19958 1.04997 0.89242 1.00640 1.20830 0.98323 0.97959 0.94470 1.20674 1.02420 0.96934 0.96421 1.20310 0.97992 0.90962 0.99180 1.18944 1.03382 0.92816 0.93936 0.77705 0.87188 1.18104 1.17927 0.81196 0.85680 0.86246 0.76008 0.89483 0.89774 0.81119 0.80438 0.74401 0.89509 0.88425 0.86703 0.85718 0.85934 0.85985 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 -0.76 12.88 -35.23 -0.45 -1.22 16 2 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 3 Si 0.68 -0.29 30.76 -169.99 -5.23 -5.52 16 4 C -0.20 -0.42 5.57 -102.71 -0.57 -0.99 16 5 C 0.07 0.01 9.89 -16.73 -0.17 -0.15 16 6 N -0.47 -0.27 2.27 -115.70 -0.26 -0.53 16 7 C 0.09 -0.31 6.48 -5.19 -0.03 -0.34 16 8 C 0.49 -0.47 7.90 -10.99 -0.09 -0.56 16 9 O -0.51 -2.23 16.02 5.56 0.09 -2.14 16 10 N -0.71 2.67 5.26 -53.02 -0.28 2.39 16 11 C 0.12 -0.34 4.32 -67.12 -0.29 -0.63 16 12 H 0.11 -0.07 7.46 -51.93 -0.39 -0.46 16 13 C -0.15 0.49 7.35 -25.93 -0.19 0.30 16 14 C -0.02 0.06 4.17 -90.96 -0.38 -0.32 16 15 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 16 C 0.22 0.09 7.36 -155.42 -1.14 -1.06 16 17 N -0.49 -1.58 11.25 -10.82 -0.12 -1.70 16 18 C -0.03 -0.04 11.87 -17.81 -0.21 -0.25 16 19 C -0.05 0.03 12.04 -16.56 -0.20 -0.17 16 20 N -0.57 0.70 5.94 -10.23 -0.06 0.64 16 21 C -0.13 0.42 7.37 -25.92 -0.19 0.23 16 22 C 0.11 0.33 6.80 -83.99 -0.57 -0.24 16 23 C -0.13 -0.29 10.00 -39.43 -0.39 -0.69 16 24 C -0.10 -0.20 10.01 -39.54 -0.40 -0.60 16 25 C -0.15 -0.38 9.97 -39.95 -0.40 -0.78 16 26 C -0.07 -0.24 10.05 -39.65 -0.40 -0.64 16 27 C -0.09 -0.35 6.35 -105.14 -0.67 -1.02 16 28 H 0.38 -1.03 8.70 45.56 0.40 -0.63 16 29 H 0.11 0.25 7.96 -51.93 -0.41 -0.16 16 30 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 31 H -0.25 -0.71 7.11 56.52 0.40 -0.30 16 32 H 0.17 -0.59 6.35 -52.48 -0.33 -0.92 16 33 H 0.13 -0.86 8.12 -51.93 -0.42 -1.29 16 34 H 0.12 -0.65 8.14 -51.93 -0.42 -1.07 16 35 H 0.40 -2.70 8.70 -40.82 -0.36 -3.06 16 36 H 0.09 -0.35 6.64 -51.93 -0.34 -0.69 16 37 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 38 H 0.17 -0.05 8.06 -52.49 -0.42 -0.47 16 39 H 0.18 -0.62 8.06 -52.49 -0.42 -1.05 16 40 H 0.42 -1.63 7.53 -40.82 -0.31 -1.94 16 41 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 42 H 0.10 -0.26 8.10 -51.93 -0.42 -0.68 16 43 H 0.11 0.03 8.06 -52.49 -0.42 -0.39 16 44 H 0.12 -0.01 8.06 -52.49 -0.42 -0.43 16 45 H 0.12 0.09 8.06 -52.49 -0.42 -0.34 16 46 H 0.12 0.34 8.06 -52.48 -0.42 -0.08 16 LS Contribution 389.65 15.07 5.87 5.87 Total: 0.00 -13.81 389.65 -12.64 -26.45 By element: Atomic # 1 Polarization: -10.42 SS G_CDS: -6.01 Total: -16.43 kcal Atomic # 6 Polarization: -1.64 SS G_CDS: -6.18 Total: -7.82 kcal Atomic # 7 Polarization: 1.52 SS G_CDS: -0.72 Total: 0.80 kcal Atomic # 8 Polarization: -2.99 SS G_CDS: -0.36 Total: -3.36 kcal Atomic # 14 Polarization: -0.29 SS G_CDS: -5.23 Total: -5.52 kcal Total LS contribution 5.87 Total: 5.87 kcal Total: -13.81 -12.64 -26.45 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 123.353 kcal (2) G-P(sol) polarization free energy of solvation -13.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 109.538 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.639 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.454 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.899 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds