Wall clock time and date at job start Sun Mar 7 2021 06:22:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86298 * 109.47317 * 2 1 4 4 C 1.50701 * 109.47101 * 120.00124 * 2 1 3 5 5 C 1.34237 * 126.49895 * 255.31312 * 4 2 1 6 6 N 1.36834 * 109.93690 * 180.16968 * 5 4 2 7 7 C 1.46506 * 125.06389 * 179.81801 * 6 5 4 8 8 C 1.50699 * 109.46928 * 264.69610 * 7 6 5 9 9 O 1.21282 * 120.00041 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00037 * 179.97438 * 8 7 6 11 11 C 1.46500 * 120.00169 * 179.97438 * 10 8 7 12 12 H 1.09001 * 112.84782 * 336.20020 * 11 10 8 13 13 C 1.53775 * 113.61422 * 107.50604 * 11 10 8 14 14 C 1.53773 * 87.08284 * 89.11809 * 13 11 10 15 15 H 1.09006 * 113.61101 * 270.88316 * 14 13 11 16 16 C 1.50698 * 113.61551 * 139.98210 * 14 13 11 17 17 N 1.30503 * 125.64838 * 167.52912 * 16 14 13 18 18 C 1.34128 * 109.25805 * 180.02562 * 17 16 14 19 19 C 1.34676 * 108.01514 * 359.97438 * 18 17 16 20 20 N 1.35041 * 125.65130 * 347.21738 * 16 14 13 21 21 C 1.53776 * 113.61596 * 205.00700 * 11 10 8 22 22 C 1.37691 * 109.87448 * 359.54938 * 6 5 4 23 23 C 1.39088 * 133.51300 * 180.23627 * 22 6 5 24 24 C 1.37788 * 119.77544 * 180.02562 * 23 22 6 25 25 C 1.38794 * 120.67120 * 0.02562 * 24 23 22 26 26 C 1.36662 * 120.52126 * 359.97438 * 25 24 23 27 27 C 1.39587 * 119.76822 * 0.02562 * 26 25 24 28 28 H 0.96699 * 113.99934 * 299.99752 * 1 2 3 29 29 H 1.08997 * 109.47031 * 239.99834 * 2 1 3 30 30 H 1.48499 * 110.00084 * 178.68209 * 3 2 1 31 31 H 1.48498 * 110.00070 * 300.00560 * 3 2 1 32 32 H 1.08004 * 125.03507 * 0.02562 * 5 4 2 33 33 H 1.09004 * 109.47073 * 24.69438 * 7 6 5 34 34 H 1.09000 * 109.47212 * 144.69521 * 7 6 5 35 35 H 0.96996 * 119.99844 * 0.02562 * 10 8 7 36 36 H 1.09006 * 113.61442 * 203.67118 * 13 11 10 37 37 H 1.09003 * 113.61654 * 334.56193 * 13 11 10 38 38 H 1.07999 * 125.99666 * 179.97438 * 18 17 16 39 39 H 1.08002 * 126.58528 * 180.02562 * 19 18 17 40 40 H 0.96996 * 126.39434 * 0.02562 * 20 16 14 41 41 H 1.09006 * 113.61349 * 25.42518 * 21 11 10 42 42 H 1.08997 * 113.61789 * 156.25508 * 21 11 10 43 43 H 1.08000 * 120.11311 * 0.05591 * 23 22 6 44 44 H 1.08001 * 119.66717 * 180.02562 * 24 23 22 45 45 H 1.07993 * 119.73902 * 179.97438 * 25 24 23 46 46 H 1.08005 * 120.11743 * 180.02562 * 26 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4554 -0.1373 2.3253 6 7 2.8028 -1.0990 3.2346 7 6 3.4076 -0.8404 4.5437 8 6 4.9059 -0.9628 4.4378 9 8 5.4181 -1.2392 3.3738 10 7 5.6767 -0.7650 5.5256 11 6 7.1332 -0.8844 5.4228 12 1 7.4486 -1.5123 4.5895 13 6 7.8684 0.4644 5.4930 14 6 7.9071 0.2747 7.0185 15 1 7.0350 0.6805 7.5312 16 6 9.2085 0.7017 7.6470 17 7 9.4197 0.8610 8.9250 18 6 10.6898 1.2462 9.1188 19 6 11.2885 1.3281 7.9152 20 7 10.3509 0.9771 6.9817 21 6 7.8178 -1.2376 6.7537 22 6 2.4939 -2.3457 2.7384 23 6 2.6294 -3.6363 3.2391 24 6 2.2159 -4.7108 2.4821 25 6 1.6650 -4.5195 1.2227 26 6 1.5226 -3.2601 0.7114 27 6 1.9348 -2.1571 1.4610 28 1 -0.3933 0.4417 0.7651 29 1 1.7923 -0.5138 -0.8899 30 1 3.5346 1.7702 0.0321 31 1 1.5614 2.4679 -1.2084 32 1 2.5859 0.9255 2.4667 33 1 3.1475 0.1660 4.8716 34 1 3.0339 -1.5660 5.2662 35 1 5.2670 -0.5442 6.3766 36 1 8.8532 0.4497 5.0259 37 1 7.2600 1.3105 5.1734 38 1 11.1515 1.4541 10.0727 39 1 12.3129 1.6116 7.7238 40 1 10.4817 0.9368 6.0215 41 1 7.1683 -1.7655 7.4522 42 1 8.7881 -1.7188 6.6315 43 1 3.0568 -3.7955 4.2180 44 1 2.3215 -5.7121 2.8728 45 1 1.3463 -5.3725 0.6421 46 1 1.0927 -3.1187 -0.2692 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16970406_9818708.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:22:32 Heat of formation + Delta-G solvation = 93.628957 kcal Electronic energy + Delta-G solvation = -30096.173686 eV Core-core repulsion = 25955.095258 eV Total energy + Delta-G solvation = -4141.078429 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 353.153 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -43.11153 -42.52066 -41.10691 -39.33064 -38.08134 -37.56711 -34.66360 -33.94351 -33.44651 -31.50460 -30.60730 -30.22258 -28.91139 -26.84097 -26.41763 -25.50705 -23.77959 -22.93182 -22.51384 -21.82817 -21.77112 -20.67800 -20.46453 -19.13229 -18.54663 -18.34709 -17.71433 -17.27763 -16.86339 -16.42883 -16.38292 -16.11544 -16.01590 -15.66684 -15.57204 -15.33914 -15.18598 -14.83478 -14.70639 -14.59252 -14.56041 -14.32564 -14.06288 -13.75594 -13.59960 -13.47260 -13.09247 -12.71066 -12.58391 -12.52534 -12.26117 -12.11647 -11.89622 -11.81529 -11.53498 -11.16973 -11.05623 -11.02544 -10.54939 -10.30299 -10.19676 -9.36132 -9.15216 -8.61816 -5.04948 0.14732 0.63334 1.08204 1.34669 1.42488 1.44962 1.64628 1.75946 2.00383 2.10968 2.13858 2.24046 2.94780 3.27715 3.36367 3.53726 3.60005 3.67081 3.71335 3.76272 3.78015 3.89699 4.05884 4.08541 4.19846 4.22180 4.22793 4.30801 4.48675 4.52043 4.53863 4.56593 4.58791 4.63951 4.72169 4.77167 4.79271 4.86158 4.88993 4.94344 5.03386 5.13658 5.14032 5.47289 5.50686 5.66086 5.73430 5.75800 5.77980 6.20715 6.24160 6.46652 6.47591 6.89823 7.11774 7.13538 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.561 6.561 2 C -0.042 4.042 3 Si 0.803 3.197 4 C -0.226 4.226 5 C 0.081 3.919 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.495 3.505 9 O -0.572 6.572 10 N -0.694 5.694 11 C 0.125 3.875 12 H 0.086 0.914 13 C -0.141 4.141 14 C -0.020 4.020 15 H 0.129 0.871 16 C 0.209 3.791 17 N -0.529 5.529 18 C -0.062 4.062 19 C -0.047 4.047 20 N -0.559 5.559 21 C -0.123 4.123 22 C 0.091 3.909 23 C -0.132 4.132 24 C -0.109 4.109 25 C -0.154 4.154 26 C -0.092 4.092 27 C -0.118 4.118 28 H 0.393 0.607 29 H 0.087 0.913 30 H -0.293 1.293 31 H -0.300 1.300 32 H 0.210 0.790 33 H 0.171 0.829 34 H 0.145 0.855 35 H 0.422 0.578 36 H 0.093 0.907 37 H 0.086 0.914 38 H 0.177 0.823 39 H 0.207 0.793 40 H 0.430 0.570 41 H 0.094 0.906 42 H 0.091 0.909 43 H 0.135 0.865 44 H 0.145 0.855 45 H 0.134 0.866 46 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.717 3.696 6.194 7.249 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.151 4.151 3 Si 0.708 3.292 4 C -0.234 4.234 5 C -0.044 4.044 6 N -0.148 5.148 7 C -0.037 4.037 8 C 0.281 3.719 9 O -0.449 6.449 10 N -0.347 5.347 11 C 0.018 3.982 12 H 0.104 0.896 13 C -0.180 4.180 14 C -0.040 4.040 15 H 0.147 0.853 16 C -0.055 4.055 17 N -0.250 5.250 18 C -0.209 4.209 19 C -0.181 4.181 20 N -0.164 5.164 21 C -0.162 4.162 22 C -0.014 4.014 23 C -0.153 4.153 24 C -0.129 4.129 25 C -0.173 4.173 26 C -0.110 4.110 27 C -0.122 4.122 28 H 0.243 0.757 29 H 0.104 0.896 30 H -0.221 1.221 31 H -0.227 1.227 32 H 0.226 0.774 33 H 0.188 0.812 34 H 0.163 0.837 35 H 0.261 0.739 36 H 0.111 0.889 37 H 0.104 0.896 38 H 0.194 0.806 39 H 0.223 0.777 40 H 0.271 0.729 41 H 0.112 0.888 42 H 0.110 0.890 43 H 0.152 0.848 44 H 0.162 0.838 45 H 0.152 0.848 46 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 1.217 3.743 5.461 6.732 hybrid contribution 1.076 -0.668 -1.088 1.669 sum 2.293 3.075 4.374 5.817 Atomic orbital electron populations 1.86452 1.17785 1.82395 1.50219 1.24584 0.84696 1.10433 0.95392 0.94128 0.76647 0.73444 0.84954 1.20785 1.12120 0.91862 0.98612 1.22079 0.98667 0.95363 0.88306 1.43443 1.51827 1.03717 1.15842 1.22029 0.88260 1.09514 0.83895 1.21504 0.90672 0.75939 0.83786 1.90814 1.75779 1.48359 1.29989 1.45477 1.05699 1.70999 1.12560 1.21664 0.80165 0.97386 0.98941 0.89563 1.23480 1.01807 0.98752 0.93962 1.21150 0.91133 0.96981 0.94704 0.85305 1.23357 0.90670 1.03812 0.87694 1.70178 1.18620 1.20102 1.16070 1.22743 0.91282 1.07567 0.99339 1.23273 0.97614 1.08240 0.88988 1.43294 1.10138 1.51885 1.11102 1.23321 1.01864 0.94958 0.96059 1.18380 1.01536 0.87130 0.94380 1.20259 1.04487 0.89092 1.01440 1.21125 0.98320 0.99084 0.94321 1.20905 1.02416 0.96956 0.97043 1.20439 0.99347 0.91874 0.99387 1.19370 1.03997 0.93927 0.94890 0.75679 0.89553 1.22091 1.22741 0.77406 0.81208 0.83733 0.73924 0.88883 0.89582 0.80570 0.77670 0.72912 0.88777 0.89003 0.84752 0.83753 0.84771 0.86695 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -2.19 12.88 -148.98 -1.92 -4.11 16 2 C -0.04 -0.16 3.06 71.24 0.22 0.06 16 3 Si 0.80 -0.79 30.76 68.60 2.11 1.32 16 4 C -0.23 -1.15 5.57 -18.62 -0.10 -1.26 16 5 C 0.08 -0.05 9.89 83.00 0.82 0.77 16 6 N -0.47 -0.02 2.27 -519.97 -1.18 -1.20 16 7 C 0.09 -0.82 6.48 85.63 0.56 -0.26 16 8 C 0.50 -1.59 7.90 87.66 0.69 -0.90 16 9 O -0.57 -5.14 16.02 -3.04 -0.05 -5.19 16 10 N -0.69 6.36 5.26 -440.05 -2.32 4.05 16 11 C 0.12 -0.76 4.32 45.51 0.20 -0.56 16 12 H 0.09 -0.05 7.46 -2.39 -0.02 -0.07 16 13 C -0.14 1.07 7.35 31.12 0.23 1.30 16 14 C -0.02 0.12 4.17 -11.02 -0.05 0.07 16 15 H 0.13 -1.04 8.14 -2.38 -0.02 -1.05 16 16 C 0.21 0.09 7.36 138.13 1.02 1.11 16 17 N -0.53 -3.62 11.25 -188.13 -2.12 -5.73 16 18 C -0.06 -0.23 11.87 83.53 0.99 0.76 16 19 C -0.05 0.08 12.04 83.09 1.00 1.08 16 20 N -0.56 1.78 5.94 -186.27 -1.11 0.67 16 21 C -0.12 0.87 7.37 31.12 0.23 1.10 16 22 C 0.09 0.59 6.80 39.03 0.27 0.86 16 23 C -0.13 -0.63 10.00 22.37 0.22 -0.41 16 24 C -0.11 -0.54 10.01 22.30 0.22 -0.32 16 25 C -0.15 -1.09 9.97 22.03 0.22 -0.87 16 26 C -0.09 -0.93 10.05 22.23 0.22 -0.70 16 27 C -0.12 -1.15 6.35 -20.20 -0.13 -1.28 16 28 H 0.39 -2.10 8.70 -74.06 -0.64 -2.75 16 29 H 0.09 0.66 7.96 -2.39 -0.02 0.64 16 30 H -0.29 -1.53 7.11 99.48 0.71 -0.82 16 31 H -0.30 -1.90 7.11 99.48 0.71 -1.19 16 32 H 0.21 -2.03 6.35 -2.91 -0.02 -2.05 16 33 H 0.17 -3.12 8.12 -2.38 -0.02 -3.14 16 34 H 0.15 -2.04 8.14 -2.39 -0.02 -2.06 16 35 H 0.42 -6.77 8.70 -92.71 -0.81 -7.58 16 36 H 0.09 -0.82 6.64 -2.38 -0.02 -0.84 16 37 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 38 H 0.18 0.08 8.06 -2.91 -0.02 0.06 16 39 H 0.21 -1.76 8.06 -2.91 -0.02 -1.78 16 40 H 0.43 -3.80 7.53 -92.71 -0.70 -4.49 16 41 H 0.09 -0.79 8.14 -2.38 -0.02 -0.81 16 42 H 0.09 -0.51 8.10 -2.39 -0.02 -0.53 16 43 H 0.13 -0.05 8.06 -2.91 -0.02 -0.07 16 44 H 0.14 -0.02 8.06 -2.91 -0.02 -0.04 16 45 H 0.13 0.42 8.06 -2.91 -0.02 0.40 16 46 H 0.11 1.10 8.06 -2.91 -0.02 1.07 16 Total: 0.00 -36.59 389.65 -0.81 -37.40 By element: Atomic # 1 Polarization: -26.69 SS G_CDS: -1.06 Total: -27.76 kcal Atomic # 6 Polarization: -6.27 SS G_CDS: 6.83 Total: 0.55 kcal Atomic # 7 Polarization: 4.50 SS G_CDS: -6.72 Total: -2.22 kcal Atomic # 8 Polarization: -7.33 SS G_CDS: -1.97 Total: -9.30 kcal Atomic # 14 Polarization: -0.79 SS G_CDS: 2.11 Total: 1.32 kcal Total: -36.59 -0.81 -37.40 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16970406_9818708.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.029 kcal (2) G-P(sol) polarization free energy of solvation -36.588 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 94.441 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.812 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.400 kcal (6) G-S(sol) free energy of system = (1) + (5) 93.629 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds