Wall clock time and date at job start Sun Mar 7 2021 10:51:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35894 * 116.99748 * 2 1 4 4 C 1.38820 * 119.93245 * 179.97438 * 3 2 1 5 5 C 1.37922 * 120.05961 * 179.97438 * 4 3 2 6 6 C 1.39359 * 119.93908 * 0.02562 * 5 4 3 7 7 C 1.48404 * 120.06484 * 180.02562 * 6 5 4 8 8 N 1.31630 * 126.03758 * 325.18649 * 7 6 5 9 9 N 1.40067 * 108.10395 * 180.23857 * 8 7 6 10 10 C 1.46503 * 125.92727 * 179.71865 * 9 8 7 11 11 C 1.50702 * 109.47528 * 305.02990 * 10 9 8 12 12 O 1.21283 * 119.99676 * 359.97438 * 11 10 9 13 13 N 1.34769 * 120.00210 * 179.97438 * 11 10 9 14 14 C 1.46503 * 120.00117 * 359.97438 * 13 11 10 15 15 C 1.46502 * 120.00172 * 179.97438 * 13 11 10 16 16 H 1.09005 * 112.84609 * 11.20130 * 15 13 11 17 17 C 1.53777 * 113.61415 * 142.50095 * 15 13 11 18 18 C 1.53789 * 87.07980 * 89.12141 * 17 15 13 19 19 H 1.09002 * 113.68335 * 270.87156 * 18 17 15 20 20 O 1.42902 * 113.61523 * 139.98150 * 18 17 15 21 21 C 1.53780 * 113.61657 * 240.00392 * 15 13 11 22 22 C 1.35034 * 108.14444 * 359.74774 * 9 8 7 23 23 C 1.35085 * 107.97720 * 359.97438 * 22 9 8 24 24 C 1.50706 * 126.07159 * 179.97438 * 23 22 9 25 25 O 1.42894 * 109.47040 * 255.02338 * 24 23 22 26 26 Si 1.86296 * 109.47429 * 15.02667 * 24 23 22 27 27 C 1.39349 * 119.86737 * 0.27141 * 6 5 4 28 28 C 1.37925 * 119.93843 * 359.44866 * 27 6 5 29 29 H 1.08995 * 109.47038 * 299.99573 * 1 2 3 30 30 H 1.09001 * 109.47412 * 59.99703 * 1 2 3 31 31 H 1.09001 * 109.46963 * 179.97438 * 1 2 3 32 32 H 1.07993 * 119.97038 * 359.96687 * 4 3 2 33 33 H 1.07997 * 120.03081 * 180.02562 * 5 4 3 34 34 H 1.09010 * 109.46995 * 65.02761 * 10 9 8 35 35 H 1.08999 * 109.47608 * 185.02761 * 10 9 8 36 36 H 1.09000 * 109.47098 * 90.00046 * 14 13 11 37 37 H 1.09001 * 109.47160 * 209.99430 * 14 13 11 38 38 H 1.08996 * 109.47106 * 330.00383 * 14 13 11 39 39 H 1.09003 * 113.61784 * 203.66482 * 17 15 13 40 40 H 1.08993 * 113.62005 * 334.56971 * 17 15 13 41 41 H 0.96698 * 113.99760 * 82.49780 * 20 18 17 42 42 H 1.08999 * 113.61340 * 25.43102 * 21 15 13 43 43 H 1.09002 * 113.61508 * 156.33553 * 21 15 13 44 44 H 1.07997 * 126.00714 * 180.02562 * 22 9 8 45 45 H 1.08999 * 109.46987 * 135.02636 * 24 23 22 46 46 H 0.96695 * 114.00033 * 179.97438 * 25 24 23 47 47 H 1.48495 * 110.00131 * 178.67972 * 26 24 23 48 48 H 1.48500 * 110.00226 * 300.00282 * 26 24 23 49 49 H 1.08008 * 120.03212 * 179.70556 * 27 6 5 50 50 H 1.08000 * 119.97009 * 180.27434 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4323 1.2819 0.0005 5 6 4.0611 2.5095 0.0000 6 6 3.3034 3.6791 -0.0005 7 6 3.9771 5.0014 -0.0017 8 7 5.1075 5.2951 0.6054 9 7 5.3941 6.6445 0.3627 10 6 6.5595 7.3789 0.8614 11 6 6.6273 7.2549 2.3617 12 8 5.7847 6.6163 2.9560 13 7 7.6241 7.8536 3.0431 14 6 8.6422 8.6246 2.3251 15 6 7.6896 7.7335 4.5017 16 1 7.0015 6.9859 4.8961 17 6 9.1222 7.6024 5.0452 18 6 9.1513 9.1384 5.1171 19 1 9.5022 9.6130 4.2008 20 8 9.7976 9.6445 6.2869 21 6 7.6190 9.0835 5.2348 22 6 4.4094 7.1511 -0.4101 23 6 3.5221 6.1627 -0.6559 24 6 2.2647 6.2832 -1.4779 25 8 1.1299 6.3184 -0.6102 26 14 2.3272 7.8509 -2.4824 27 6 1.9119 3.6045 0.0052 28 6 1.2885 2.3742 -0.0001 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 4.0189 0.3753 0.0015 33 1 5.1397 2.5642 0.0000 34 1 7.4662 6.9638 0.4212 35 1 6.4710 8.4302 0.5874 36 1 8.3206 9.6628 2.2426 37 1 9.5847 8.5785 2.8707 38 1 8.7786 8.2062 1.3279 39 1 9.1767 7.1186 6.0204 40 1 9.8261 7.1856 4.3250 41 1 10.7614 9.6813 6.2189 42 1 7.1094 9.8623 4.6674 43 1 7.2625 9.0045 6.2618 44 1 4.3435 8.1674 -0.7693 45 1 2.1843 5.4262 -2.1467 46 1 0.2839 6.3957 -1.0721 47 1 1.1074 7.9656 -3.3214 48 1 2.4370 9.0269 -1.5823 49 1 1.3221 4.5093 0.0096 50 1 0.2101 2.3158 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16982422_12622750.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:51:32 Heat of formation + Delta-G solvation = 16.061799 kcal Electronic energy + Delta-G solvation = -34137.898914 eV Core-core repulsion = 29522.433110 eV Total energy + Delta-G solvation = -4615.465804 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.33 seconds Orbital eigenvalues (eV) -42.41968 -41.65966 -40.78975 -39.65701 -38.30225 -37.74762 -36.76466 -35.00962 -34.21134 -32.12504 -31.86518 -30.98422 -29.00338 -28.69982 -27.95015 -26.91233 -25.97294 -24.87287 -23.57593 -23.45367 -21.82926 -21.34340 -20.69259 -19.82434 -19.09436 -18.97303 -18.47895 -18.25874 -18.06962 -17.13909 -17.04080 -16.90254 -16.56201 -16.38459 -16.12449 -15.99679 -15.52572 -15.22535 -15.15445 -14.98361 -14.73255 -14.54956 -14.48076 -14.37965 -14.01825 -13.90235 -13.69909 -13.60300 -13.44269 -13.35891 -13.27205 -12.84221 -12.75849 -12.65265 -12.58789 -12.53590 -12.24840 -12.02576 -11.63334 -11.54236 -11.26247 -11.08567 -10.86205 -10.32414 -10.31128 -9.86172 -9.77788 -9.52085 -8.72435 -4.97465 0.31614 0.60801 0.83705 1.26610 1.33405 1.40332 1.58114 1.76969 1.85978 1.97136 2.44218 3.00494 3.08010 3.11585 3.32281 3.38722 3.48610 3.54988 3.66930 3.69068 3.70799 3.77934 3.83063 3.85532 4.04786 4.08902 4.13260 4.17170 4.28324 4.30296 4.36088 4.41664 4.43999 4.54749 4.62585 4.63325 4.68029 4.71638 4.72508 4.78821 4.83579 4.90625 4.95065 4.97707 5.27018 5.32052 5.40966 5.56596 5.75154 5.80552 5.89041 5.94391 6.11720 6.50722 6.56352 6.57639 6.78284 6.98184 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.318 6.318 3 C 0.135 3.865 4 C -0.157 4.157 5 C -0.050 4.050 6 C -0.056 4.056 7 C 0.140 3.860 8 N -0.252 5.252 9 N -0.360 5.360 10 C 0.120 3.880 11 C 0.502 3.498 12 O -0.498 6.498 13 N -0.601 5.601 14 C 0.059 3.941 15 C 0.121 3.879 16 H 0.116 0.884 17 C -0.177 4.177 18 C 0.069 3.931 19 H 0.088 0.912 20 O -0.558 6.558 21 C -0.139 4.139 22 C 0.067 3.933 23 C -0.206 4.206 24 C -0.036 4.036 25 O -0.533 6.533 26 Si 0.683 3.317 27 C -0.061 4.061 28 C -0.213 4.213 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.101 0.899 32 H 0.133 0.867 33 H 0.132 0.868 34 H 0.119 0.881 35 H 0.128 0.872 36 H 0.064 0.936 37 H 0.084 0.916 38 H 0.077 0.923 39 H 0.104 0.896 40 H 0.076 0.924 41 H 0.380 0.620 42 H 0.077 0.923 43 H 0.102 0.898 44 H 0.178 0.822 45 H 0.075 0.925 46 H 0.377 0.623 47 H -0.260 1.260 48 H -0.255 1.255 49 H 0.155 0.845 50 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.073 4.181 -5.591 8.083 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.231 6.231 3 C 0.089 3.911 4 C -0.176 4.176 5 C -0.069 4.069 6 C -0.058 4.058 7 C -0.026 4.026 8 N -0.073 5.073 9 N -0.142 5.142 10 C -0.005 4.005 11 C 0.288 3.712 12 O -0.369 6.369 13 N -0.336 5.336 14 C -0.083 4.083 15 C 0.017 3.983 16 H 0.134 0.866 17 C -0.216 4.216 18 C 0.010 3.990 19 H 0.105 0.895 20 O -0.364 6.364 21 C -0.177 4.177 22 C -0.078 4.078 23 C -0.217 4.217 24 C -0.147 4.147 25 O -0.341 6.341 26 Si 0.584 3.416 27 C -0.080 4.080 28 C -0.232 4.232 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.119 0.881 32 H 0.151 0.849 33 H 0.150 0.850 34 H 0.137 0.863 35 H 0.146 0.854 36 H 0.083 0.917 37 H 0.102 0.898 38 H 0.095 0.905 39 H 0.123 0.877 40 H 0.095 0.905 41 H 0.227 0.773 42 H 0.096 0.904 43 H 0.121 0.879 44 H 0.194 0.806 45 H 0.093 0.907 46 H 0.225 0.775 47 H -0.184 1.184 48 H -0.180 1.180 49 H 0.172 0.828 50 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 4.251 4.079 -4.015 7.130 hybrid contribution -1.242 0.258 -0.271 1.297 sum 3.009 4.338 -4.286 6.800 Atomic orbital electron populations 1.23086 0.78178 1.04124 1.01482 1.86079 1.21577 1.27005 1.88401 1.19203 0.92419 0.84224 0.95258 1.20337 0.91337 0.98548 1.07354 1.21021 0.99988 0.90471 0.95435 1.17644 0.92523 0.88898 1.06762 1.20531 0.92829 0.93546 0.95658 1.77782 1.16875 0.91480 1.21147 1.47795 1.18920 1.08143 1.39337 1.21544 0.88360 0.97953 0.92663 1.20556 0.81609 0.79620 0.89456 1.90844 1.38024 1.38535 1.69542 1.47508 1.27226 1.52458 1.06431 1.22146 0.92425 0.96238 0.97521 1.21723 0.98646 0.98832 0.79078 0.86618 1.24086 0.96689 0.97951 1.02833 1.23750 0.94065 0.92536 0.88648 0.89464 1.86553 1.24275 1.87031 1.38519 1.23500 0.94465 0.97486 1.02281 1.22180 0.89994 0.99334 0.96279 1.19230 0.98920 0.93296 1.10299 1.23967 0.84313 1.10445 0.95963 1.86572 1.16282 1.94958 1.36265 0.95199 0.88677 0.76302 0.81421 1.21680 0.93615 0.98634 0.94056 1.21188 1.00105 0.92010 1.09887 0.92510 0.92521 0.88108 0.84898 0.85021 0.86315 0.85447 0.91704 0.89780 0.90478 0.87747 0.90497 0.77288 0.90427 0.87929 0.80557 0.90692 0.77526 1.18435 1.17962 0.82773 0.85230 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 9.81 101.05 0.99 0.99 16 2 O -0.32 -1.11 10.49 -19.41 -0.20 -1.32 16 3 C 0.13 0.53 6.69 -39.15 -0.26 0.27 16 4 C -0.16 -0.60 9.97 -39.48 -0.39 -0.99 16 5 C -0.05 -0.21 9.74 -39.28 -0.38 -0.59 16 6 C -0.06 -0.27 5.80 -104.88 -0.61 -0.88 16 7 C 0.14 0.73 6.73 -82.78 -0.56 0.17 16 8 N -0.25 -1.47 11.63 33.42 0.39 -1.08 16 9 N -0.36 -0.89 3.40 -62.58 -0.21 -1.11 16 10 C 0.12 -0.18 5.54 -5.19 -0.03 -0.21 16 11 C 0.50 0.92 7.70 -10.99 -0.08 0.83 16 12 O -0.50 -3.61 15.18 5.56 0.08 -3.52 16 13 N -0.60 0.53 3.08 -173.00 -0.53 0.00 16 14 C 0.06 -0.29 8.65 59.85 0.52 0.22 16 15 C 0.12 0.03 4.46 -67.12 -0.30 -0.27 16 16 H 0.12 0.31 7.23 -51.93 -0.38 -0.07 16 17 C -0.18 0.25 7.13 -25.92 -0.18 0.06 16 18 C 0.07 -0.11 4.54 -25.91 -0.12 -0.23 16 19 H 0.09 -0.32 5.55 -51.93 -0.29 -0.61 16 20 O -0.56 0.06 13.67 -35.23 -0.48 -0.43 16 21 C -0.14 0.02 7.58 -25.92 -0.20 -0.18 16 22 C 0.07 0.08 9.96 -17.26 -0.17 -0.09 16 23 C -0.21 -0.59 5.37 -104.76 -0.56 -1.15 16 24 C -0.04 -0.02 2.00 36.01 0.07 0.05 16 25 O -0.53 -0.62 10.04 -35.23 -0.35 -0.98 16 26 Si 0.68 -0.94 30.78 -169.99 -5.23 -6.18 16 27 C -0.06 -0.23 8.94 -39.28 -0.35 -0.58 16 28 C -0.21 -0.64 9.02 -39.48 -0.36 -1.00 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 30 H 0.06 -0.07 7.65 -51.93 -0.40 -0.47 16 31 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 32 H 0.13 0.32 8.06 -52.49 -0.42 -0.10 16 33 H 0.13 0.43 8.06 -52.49 -0.42 0.01 16 34 H 0.12 -0.48 7.40 -51.92 -0.38 -0.86 16 35 H 0.13 -0.69 8.03 -51.93 -0.42 -1.11 16 36 H 0.06 -0.38 8.14 -51.93 -0.42 -0.81 16 37 H 0.08 -0.47 4.83 -51.93 -0.25 -0.72 16 38 H 0.08 -0.53 6.44 -51.93 -0.33 -0.87 16 39 H 0.10 -0.08 8.14 -51.93 -0.42 -0.50 16 40 H 0.08 -0.18 7.36 -51.93 -0.38 -0.56 16 41 H 0.38 -1.61 9.12 45.56 0.42 -1.19 16 42 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 43 H 0.10 0.07 8.14 -51.93 -0.42 -0.35 16 44 H 0.18 -0.40 6.36 -52.49 -0.33 -0.73 16 45 H 0.08 -0.03 7.85 -51.93 -0.41 -0.44 16 46 H 0.38 -1.14 8.74 45.56 0.40 -0.74 16 47 H -0.26 -0.18 7.11 56.52 0.40 0.22 16 48 H -0.25 -0.27 7.04 56.52 0.40 0.13 16 49 H 0.16 0.50 4.49 -52.48 -0.24 0.26 16 50 H 0.13 0.10 6.28 -52.49 -0.33 -0.23 16 LS Contribution 403.89 15.07 6.09 6.09 Total: 0.00 -13.99 403.89 -9.32 -23.30 By element: Atomic # 1 Polarization: -5.33 SS G_CDS: -5.88 Total: -11.21 kcal Atomic # 6 Polarization: -0.59 SS G_CDS: -2.98 Total: -3.57 kcal Atomic # 7 Polarization: -1.83 SS G_CDS: -0.36 Total: -2.19 kcal Atomic # 8 Polarization: -5.29 SS G_CDS: -0.95 Total: -6.24 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.23 Total: -6.18 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -13.99 -9.32 -23.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_12622750.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 39.366 kcal (2) G-P(sol) polarization free energy of solvation -13.987 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.378 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.316 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.304 kcal (6) G-S(sol) free energy of system = (1) + (5) 16.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.33 seconds