Wall clock time and date at job start Sun Mar 7 2021 10:51:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35894 * 116.99748 * 2 1 4 4 C 1.38820 * 119.93245 * 179.97438 * 3 2 1 5 5 C 1.37922 * 120.05961 * 179.97438 * 4 3 2 6 6 C 1.39359 * 119.93908 * 0.02562 * 5 4 3 7 7 C 1.48404 * 120.06484 * 180.02562 * 6 5 4 8 8 N 1.31630 * 126.03758 * 325.18649 * 7 6 5 9 9 N 1.40067 * 108.10395 * 180.23857 * 8 7 6 10 10 C 1.46503 * 125.92727 * 179.71865 * 9 8 7 11 11 C 1.50702 * 109.47528 * 305.02990 * 10 9 8 12 12 O 1.21283 * 119.99676 * 359.97438 * 11 10 9 13 13 N 1.34769 * 120.00210 * 179.97438 * 11 10 9 14 14 C 1.46503 * 120.00117 * 359.97438 * 13 11 10 15 15 C 1.46502 * 120.00172 * 179.97438 * 13 11 10 16 16 H 1.09005 * 112.84609 * 11.20130 * 15 13 11 17 17 C 1.53777 * 113.61415 * 142.50095 * 15 13 11 18 18 C 1.53789 * 87.07980 * 89.12141 * 17 15 13 19 19 H 1.09002 * 113.68335 * 270.87156 * 18 17 15 20 20 O 1.42902 * 113.61523 * 139.98150 * 18 17 15 21 21 C 1.53780 * 113.61657 * 240.00392 * 15 13 11 22 22 C 1.35034 * 108.14444 * 359.74774 * 9 8 7 23 23 C 1.35085 * 107.97720 * 359.97438 * 22 9 8 24 24 C 1.50706 * 126.07159 * 179.97438 * 23 22 9 25 25 O 1.42894 * 109.47040 * 255.02338 * 24 23 22 26 26 Si 1.86296 * 109.47429 * 15.02667 * 24 23 22 27 27 C 1.39349 * 119.86737 * 0.27141 * 6 5 4 28 28 C 1.37925 * 119.93843 * 359.44866 * 27 6 5 29 29 H 1.08995 * 109.47038 * 299.99573 * 1 2 3 30 30 H 1.09001 * 109.47412 * 59.99703 * 1 2 3 31 31 H 1.09001 * 109.46963 * 179.97438 * 1 2 3 32 32 H 1.07993 * 119.97038 * 359.96687 * 4 3 2 33 33 H 1.07997 * 120.03081 * 180.02562 * 5 4 3 34 34 H 1.09010 * 109.46995 * 65.02761 * 10 9 8 35 35 H 1.08999 * 109.47608 * 185.02761 * 10 9 8 36 36 H 1.09000 * 109.47098 * 90.00046 * 14 13 11 37 37 H 1.09001 * 109.47160 * 209.99430 * 14 13 11 38 38 H 1.08996 * 109.47106 * 330.00383 * 14 13 11 39 39 H 1.09003 * 113.61784 * 203.66482 * 17 15 13 40 40 H 1.08993 * 113.62005 * 334.56971 * 17 15 13 41 41 H 0.96698 * 113.99760 * 82.49780 * 20 18 17 42 42 H 1.08999 * 113.61340 * 25.43102 * 21 15 13 43 43 H 1.09002 * 113.61508 * 156.33553 * 21 15 13 44 44 H 1.07997 * 126.00714 * 180.02562 * 22 9 8 45 45 H 1.08999 * 109.46987 * 135.02636 * 24 23 22 46 46 H 0.96695 * 114.00033 * 179.97438 * 25 24 23 47 47 H 1.48495 * 110.00131 * 178.67972 * 26 24 23 48 48 H 1.48500 * 110.00226 * 300.00282 * 26 24 23 49 49 H 1.08008 * 120.03212 * 179.70556 * 27 6 5 50 50 H 1.08000 * 119.97009 * 180.27434 * 28 27 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2109 0.0000 4 6 3.4323 1.2819 0.0005 5 6 4.0611 2.5095 0.0000 6 6 3.3034 3.6791 -0.0005 7 6 3.9771 5.0014 -0.0017 8 7 5.1075 5.2951 0.6054 9 7 5.3941 6.6445 0.3627 10 6 6.5595 7.3789 0.8614 11 6 6.6273 7.2549 2.3617 12 8 5.7847 6.6163 2.9560 13 7 7.6241 7.8536 3.0431 14 6 8.6422 8.6246 2.3251 15 6 7.6896 7.7335 4.5017 16 1 7.0015 6.9859 4.8961 17 6 9.1222 7.6024 5.0452 18 6 9.1513 9.1384 5.1171 19 1 9.5022 9.6130 4.2008 20 8 9.7976 9.6445 6.2869 21 6 7.6190 9.0835 5.2348 22 6 4.4094 7.1511 -0.4101 23 6 3.5221 6.1627 -0.6559 24 6 2.2647 6.2832 -1.4779 25 8 1.1299 6.3184 -0.6102 26 14 2.3272 7.8509 -2.4824 27 6 1.9119 3.6045 0.0052 28 6 1.2885 2.3742 -0.0001 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5139 -0.8899 31 1 -0.3633 -1.0277 -0.0005 32 1 4.0189 0.3753 0.0015 33 1 5.1397 2.5642 0.0000 34 1 7.4662 6.9638 0.4212 35 1 6.4710 8.4302 0.5874 36 1 8.3206 9.6628 2.2426 37 1 9.5847 8.5785 2.8707 38 1 8.7786 8.2062 1.3279 39 1 9.1767 7.1186 6.0204 40 1 9.8261 7.1856 4.3250 41 1 10.7614 9.6813 6.2189 42 1 7.1094 9.8623 4.6674 43 1 7.2625 9.0045 6.2618 44 1 4.3435 8.1674 -0.7693 45 1 2.1843 5.4262 -2.1467 46 1 0.2839 6.3957 -1.0721 47 1 1.1074 7.9656 -3.3214 48 1 2.4370 9.0269 -1.5823 49 1 1.3221 4.5093 0.0096 50 1 0.2101 2.3158 -0.0002 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16982422_12622750.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:51:30 Heat of formation + Delta-G solvation = 9.036749 kcal Electronic energy + Delta-G solvation = -34138.203543 eV Core-core repulsion = 29522.433110 eV Total energy + Delta-G solvation = -4615.770433 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.40 seconds Orbital eigenvalues (eV) -42.51816 -41.65617 -40.98982 -39.71507 -38.47799 -37.79514 -36.74085 -35.02862 -34.23200 -32.29736 -32.04716 -31.13390 -29.03468 -28.45392 -28.01411 -26.86909 -26.00222 -24.88024 -23.72669 -23.64853 -21.86643 -21.40561 -20.81850 -19.80005 -19.17631 -19.02467 -18.48570 -18.27317 -18.06341 -17.20127 -17.03420 -16.99272 -16.69168 -16.45408 -16.16009 -16.06037 -15.49263 -15.31937 -15.18699 -15.05274 -14.80853 -14.58807 -14.48812 -14.40317 -14.11145 -13.78819 -13.69973 -13.58516 -13.43652 -13.31113 -13.14808 -12.90127 -12.79735 -12.76307 -12.63058 -12.47323 -12.29990 -12.13911 -11.76911 -11.48456 -11.40889 -11.19458 -10.78154 -10.47832 -10.30691 -10.04025 -9.80638 -9.64884 -8.95552 -4.83948 0.05411 0.33777 0.76919 1.29980 1.36900 1.41011 1.67225 1.69160 1.82084 2.02447 2.31422 2.77377 3.17846 3.24150 3.35672 3.43197 3.55001 3.59443 3.72546 3.76351 3.87125 3.89281 3.90658 3.92955 4.01855 4.11766 4.18546 4.22836 4.36131 4.36738 4.38411 4.49257 4.54391 4.57252 4.60930 4.64244 4.67516 4.71002 4.75248 4.79482 4.84457 4.88053 4.90201 5.05324 5.06263 5.08148 5.30880 5.46951 5.53201 5.57587 5.70317 5.89235 6.19285 6.37386 6.60926 6.69975 6.87568 6.97219 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.334 6.334 3 C 0.124 3.876 4 C -0.167 4.167 5 C -0.059 4.059 6 C -0.071 4.071 7 C 0.117 3.883 8 N -0.295 5.295 9 N -0.362 5.362 10 C 0.115 3.885 11 C 0.494 3.506 12 O -0.568 6.568 13 N -0.592 5.592 14 C 0.046 3.954 15 C 0.114 3.886 16 H 0.077 0.923 17 C -0.168 4.168 18 C 0.081 3.919 19 H 0.118 0.882 20 O -0.582 6.582 21 C -0.144 4.144 22 C 0.074 3.926 23 C -0.227 4.227 24 C -0.054 4.054 25 O -0.555 6.555 26 Si 0.781 3.219 27 C -0.068 4.068 28 C -0.211 4.211 29 H 0.062 0.938 30 H 0.068 0.932 31 H 0.118 0.882 32 H 0.141 0.859 33 H 0.131 0.869 34 H 0.149 0.851 35 H 0.176 0.824 36 H 0.084 0.916 37 H 0.094 0.906 38 H 0.104 0.896 39 H 0.092 0.908 40 H 0.092 0.908 41 H 0.397 0.603 42 H 0.080 0.920 43 H 0.084 0.916 44 H 0.215 0.785 45 H 0.077 0.923 46 H 0.392 0.608 47 H -0.287 1.287 48 H -0.281 1.281 49 H 0.159 0.841 50 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.135 6.184 -7.459 10.965 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.079 4.079 6 C -0.073 4.073 7 C -0.048 4.048 8 N -0.117 5.117 9 N -0.143 5.143 10 C -0.008 4.008 11 C 0.281 3.719 12 O -0.445 6.445 13 N -0.326 5.326 14 C -0.095 4.095 15 C 0.009 3.991 16 H 0.096 0.904 17 C -0.207 4.207 18 C 0.023 3.977 19 H 0.136 0.864 20 O -0.390 6.390 21 C -0.183 4.183 22 C -0.071 4.071 23 C -0.238 4.238 24 C -0.162 4.162 25 O -0.365 6.365 26 Si 0.684 3.316 27 C -0.087 4.087 28 C -0.229 4.229 29 H 0.081 0.919 30 H 0.087 0.913 31 H 0.136 0.864 32 H 0.159 0.841 33 H 0.149 0.851 34 H 0.166 0.834 35 H 0.193 0.807 36 H 0.102 0.898 37 H 0.112 0.888 38 H 0.123 0.877 39 H 0.110 0.890 40 H 0.110 0.890 41 H 0.248 0.752 42 H 0.098 0.902 43 H 0.103 0.897 44 H 0.231 0.769 45 H 0.095 0.905 46 H 0.243 0.757 47 H -0.214 1.214 48 H -0.208 1.208 49 H 0.176 0.824 50 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 5.370 6.079 -5.886 10.022 hybrid contribution -1.571 -0.362 0.384 1.657 sum 3.799 5.717 -5.501 8.797 Atomic orbital electron populations 1.23358 0.76389 1.05619 1.02344 1.86055 1.23527 1.26814 1.88378 1.19339 0.92594 0.84781 0.95454 1.20508 0.91853 0.98731 1.07413 1.21078 1.00085 0.90694 0.95993 1.17898 0.93148 0.89361 1.06939 1.20773 0.93264 0.94357 0.96432 1.77676 1.17789 0.93883 1.22346 1.48097 1.19931 1.07280 1.39025 1.22046 0.88369 1.00400 0.90013 1.21245 0.81055 0.78642 0.90917 1.90819 1.40824 1.41789 1.71075 1.47584 1.27308 1.51808 1.05856 1.22544 0.91513 0.96874 0.98522 1.21615 0.98998 0.98193 0.80304 0.90444 1.24000 0.95640 0.98600 1.02455 1.23767 0.92539 0.92094 0.89344 0.86432 1.86506 1.26070 1.87033 1.39432 1.23476 0.96306 0.97218 1.01256 1.22742 0.88901 1.00350 0.95115 1.19601 1.00279 0.92965 1.10945 1.24371 0.83387 1.12643 0.95780 1.86516 1.17391 1.95171 1.37464 0.94060 0.86597 0.72479 0.78479 1.21811 0.93424 0.99191 0.94295 1.21407 1.01177 0.91390 1.08967 0.91931 0.91323 0.86399 0.84098 0.85068 0.83361 0.80688 0.89768 0.88794 0.87741 0.88968 0.88953 0.75212 0.90171 0.89717 0.76901 0.90454 0.75736 1.21413 1.20806 0.82372 0.83093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 113.37 1.11 1.10 16 2 O -0.33 -2.61 10.49 -92.36 -0.97 -3.58 16 3 C 0.12 1.15 6.69 22.55 0.15 1.30 16 4 C -0.17 -1.63 9.97 22.33 0.22 -1.41 16 5 C -0.06 -0.65 9.74 22.46 0.22 -0.44 16 6 C -0.07 -0.87 5.80 -20.03 -0.12 -0.98 16 7 C 0.12 1.45 6.73 42.52 0.29 1.74 16 8 N -0.30 -4.04 11.63 -48.17 -0.56 -4.60 16 9 N -0.36 -1.79 3.40 -351.90 -1.20 -2.99 16 10 C 0.12 -0.52 5.54 85.63 0.47 -0.05 16 11 C 0.49 2.10 7.70 87.66 0.68 2.77 16 12 O -0.57 -9.95 15.18 -3.04 -0.05 -10.00 16 13 N -0.59 1.21 3.08 -819.65 -2.53 -1.32 16 14 C 0.05 -0.59 8.65 127.77 1.10 0.52 16 15 C 0.11 0.23 4.46 45.52 0.20 0.43 16 16 H 0.08 0.74 7.23 -2.38 -0.02 0.73 16 17 C -0.17 0.42 7.13 31.12 0.22 0.64 16 18 C 0.08 -0.32 4.54 31.12 0.14 -0.18 16 19 H 0.12 -1.19 5.55 -2.39 -0.01 -1.20 16 20 O -0.58 0.47 13.67 -148.98 -2.04 -1.56 16 21 C -0.14 -0.11 7.58 31.12 0.24 0.13 16 22 C 0.07 0.14 9.96 83.47 0.83 0.97 16 23 C -0.23 -1.44 5.37 -19.95 -0.11 -1.55 16 24 C -0.05 -0.07 2.00 71.24 0.14 0.08 16 25 O -0.56 -1.67 10.04 -148.98 -1.50 -3.17 16 26 Si 0.78 -3.08 30.78 68.60 2.11 -0.97 16 27 C -0.07 -0.65 8.94 22.46 0.20 -0.45 16 28 C -0.21 -1.51 9.02 22.33 0.20 -1.31 16 29 H 0.06 -0.10 7.66 -2.39 -0.02 -0.12 16 30 H 0.07 -0.20 7.65 -2.39 -0.02 -0.22 16 31 H 0.12 -0.49 8.14 -2.39 -0.02 -0.51 16 32 H 0.14 0.97 8.06 -2.91 -0.02 0.95 16 33 H 0.13 1.29 8.06 -2.91 -0.02 1.27 16 34 H 0.15 -1.57 7.40 -2.38 -0.02 -1.59 16 35 H 0.18 -2.57 8.03 -2.39 -0.02 -2.59 16 36 H 0.08 -1.32 8.14 -2.39 -0.02 -1.34 16 37 H 0.09 -1.34 4.83 -2.39 -0.01 -1.35 16 38 H 0.10 -1.86 6.44 -2.39 -0.02 -1.87 16 39 H 0.09 0.00 8.14 -2.39 -0.02 -0.02 16 40 H 0.09 -0.52 7.36 -2.39 -0.02 -0.53 16 41 H 0.40 -3.84 9.12 -74.06 -0.68 -4.52 16 42 H 0.08 -0.01 8.14 -2.39 -0.02 -0.03 16 43 H 0.08 0.34 8.14 -2.39 -0.02 0.32 16 44 H 0.21 -1.50 6.36 -2.91 -0.02 -1.52 16 45 H 0.08 -0.01 7.85 -2.39 -0.02 -0.03 16 46 H 0.39 -2.21 8.74 -74.06 -0.65 -2.86 16 47 H -0.29 -0.16 7.11 99.48 0.71 0.55 16 48 H -0.28 -0.14 7.04 99.48 0.70 0.56 16 49 H 0.16 1.29 4.49 -2.91 -0.01 1.28 16 50 H 0.15 0.26 6.28 -2.91 -0.02 0.24 16 Total: 0.00 -38.47 403.89 -0.80 -39.26 By element: Atomic # 1 Polarization: -14.12 SS G_CDS: -0.28 Total: -14.40 kcal Atomic # 6 Polarization: -2.89 SS G_CDS: 6.20 Total: 3.31 kcal Atomic # 7 Polarization: -4.62 SS G_CDS: -4.28 Total: -8.90 kcal Atomic # 8 Polarization: -13.76 SS G_CDS: -4.55 Total: -18.31 kcal Atomic # 14 Polarization: -3.08 SS G_CDS: 2.11 Total: -0.97 kcal Total: -38.47 -0.80 -39.26 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_12622750.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.299 kcal (2) G-P(sol) polarization free energy of solvation -38.465 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 9.834 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.797 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -39.262 kcal (6) G-S(sol) free energy of system = (1) + (5) 9.037 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.40 seconds