Wall clock time and date at job start Sun Mar 7 2021 10:52:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.34779 * 120.00393 * 2 1 4 4 O 1.21282 * 120.00007 * 179.97438 * 3 2 1 5 5 C 1.50697 * 119.99738 * 359.97438 * 3 2 1 6 6 O 1.42907 * 109.47239 * 180.02562 * 5 3 2 7 7 C 1.35895 * 117.00283 * 180.02562 * 6 5 3 8 8 C 1.38711 * 120.05477 * 179.72491 * 7 6 5 9 9 C 1.50696 * 120.03173 * 359.97438 * 8 7 6 10 10 O 1.42900 * 109.46861 * 75.00071 * 9 8 7 11 11 Si 1.86292 * 109.47228 * 194.99974 * 9 8 7 12 12 C 1.38173 * 119.93977 * 179.67653 * 8 7 6 13 13 C 1.38242 * 120.05614 * 0.61832 * 12 8 7 14 14 C 1.38286 * 120.11233 * 359.67780 * 13 12 8 15 15 C 1.38131 * 120.05693 * 0.02562 * 14 13 12 16 16 C 1.46496 * 120.00056 * 179.97438 * 2 1 3 17 17 H 1.09000 * 112.91246 * 168.75089 * 16 2 1 18 18 C 1.53786 * 113.61518 * 300.00330 * 16 2 1 19 19 C 1.53781 * 87.17350 * 89.15486 * 18 16 2 20 20 H 1.08997 * 113.61223 * 270.84552 * 19 18 16 21 21 O 1.42901 * 113.61346 * 139.93765 * 19 18 16 22 22 C 1.53782 * 87.08260 * 25.39213 * 19 18 16 23 23 H 1.09000 * 109.47426 * 270.00838 * 1 2 3 24 24 H 1.09001 * 109.46761 * 30.00016 * 1 2 3 25 25 H 1.08998 * 109.47402 * 149.99728 * 1 2 3 26 26 H 1.09002 * 109.47133 * 300.00171 * 5 3 2 27 27 H 1.09000 * 109.47625 * 60.00422 * 5 3 2 28 28 H 1.09003 * 109.46997 * 315.00188 * 9 8 7 29 29 H 0.96703 * 114.00242 * 60.00226 * 10 9 8 30 30 H 1.48507 * 110.00131 * 179.97438 * 11 9 8 31 31 H 1.48500 * 110.00223 * 301.31845 * 11 9 8 32 32 H 1.08002 * 119.97135 * 180.32038 * 12 8 7 33 33 H 1.08001 * 119.94405 * 179.70378 * 13 12 8 34 34 H 1.08004 * 119.97454 * 180.02562 * 14 13 12 35 35 H 1.07995 * 120.02985 * 179.97438 * 15 14 13 36 36 H 1.09002 * 113.61357 * 334.56403 * 18 16 2 37 37 H 1.09002 * 113.61608 * 203.74565 * 18 16 2 38 38 H 0.96705 * 113.99992 * 179.97438 * 21 19 18 39 39 H 1.08997 * 113.61668 * 89.11298 * 22 19 18 40 40 H 1.08998 * 113.61674 * 219.93807 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1671 0.0005 5 6 1.3855 2.4723 -0.0006 6 8 2.3141 3.5585 -0.0011 7 6 1.7948 4.8143 -0.0011 8 6 2.6387 5.9151 0.0042 9 6 4.1330 5.7198 0.0106 10 8 4.5658 5.3142 -1.2895 11 14 4.9665 7.3209 0.4711 12 6 2.1081 7.1909 -0.0026 13 6 0.7375 7.3707 -0.0017 14 6 -0.1060 6.2749 -0.0008 15 6 0.4194 4.9974 -0.0002 16 6 2.1974 -1.2687 0.0006 17 1 3.2624 -1.1439 -0.1953 18 6 1.8953 -2.1540 1.2212 19 6 0.7441 -2.7599 0.4012 20 1 -0.1989 -2.2244 0.5105 21 8 0.6043 -4.1723 0.5677 22 6 1.5355 -2.3633 -0.8562 23 1 -0.3634 0.0002 1.0276 24 1 -0.3633 0.8900 -0.5138 25 1 -0.3634 -0.8899 -0.5139 26 1 0.7591 2.5298 -0.8908 27 1 0.7585 2.5303 0.8892 28 1 4.3958 4.9511 0.7374 29 1 4.3644 5.9519 -1.9879 30 1 6.4407 7.1414 0.4816 31 1 4.5908 8.3851 -0.4940 32 1 2.7648 8.0483 -0.0037 33 1 0.3247 8.3687 -0.0022 34 1 -1.1765 6.4180 -0.0006 35 1 -0.2398 4.1419 0.0009 36 1 1.5615 -1.5940 2.0948 37 1 2.6885 -2.8651 1.4520 38 1 -0.1184 -4.5592 0.0547 39 1 2.2311 -3.1312 -1.1947 40 1 0.9113 -1.9736 -1.6603 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16982422_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:52:41 Heat of formation + Delta-G solvation = -70.737141 kcal Electronic energy + Delta-G solvation = -23872.169750 eV Core-core repulsion = 20235.083162 eV Total energy + Delta-G solvation = -3637.086588 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -41.93407 -41.27859 -39.73786 -38.39887 -37.47386 -36.74661 -34.74663 -32.75121 -31.30591 -29.50916 -28.70027 -26.90278 -26.62843 -25.06280 -23.51932 -22.60291 -21.60266 -19.88676 -19.56577 -18.92995 -18.12434 -17.90853 -17.63721 -17.20005 -16.94156 -16.61057 -16.14033 -16.03296 -15.69207 -15.45185 -15.24568 -15.02038 -14.69467 -14.36022 -14.13756 -13.91818 -13.60409 -13.57872 -13.41566 -13.28400 -13.05239 -12.67317 -12.56290 -12.50258 -12.18684 -11.84112 -11.56756 -11.52905 -10.93284 -10.79514 -10.40004 -10.02741 -9.87193 -9.23645 -4.89131 0.18494 0.38209 1.28456 1.37708 1.41349 1.63129 2.04230 2.32827 2.65093 3.10433 3.17879 3.36345 3.47502 3.53038 3.61986 3.69003 3.72686 3.77613 3.78227 3.83118 3.85782 3.99758 4.17587 4.23112 4.31482 4.36972 4.42643 4.49126 4.62779 4.68088 4.69920 4.71924 4.84608 4.95103 4.96398 5.22936 5.29250 5.40468 5.45564 5.66559 6.06116 6.30143 6.57703 6.59815 6.98934 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.599 5.599 3 C 0.520 3.480 4 O -0.503 6.503 5 C 0.043 3.957 6 O -0.278 6.278 7 C 0.152 3.848 8 C -0.145 4.145 9 C -0.065 4.065 10 O -0.520 6.520 11 Si 0.689 3.311 12 C -0.083 4.083 13 C -0.151 4.151 14 C -0.072 4.072 15 C -0.212 4.212 16 C 0.121 3.879 17 H 0.118 0.882 18 C -0.139 4.139 19 C 0.069 3.931 20 H 0.088 0.912 21 O -0.558 6.558 22 C -0.177 4.177 23 H 0.065 0.935 24 H 0.075 0.925 25 H 0.084 0.916 26 H 0.093 0.907 27 H 0.095 0.905 28 H 0.118 0.882 29 H 0.370 0.630 30 H -0.257 1.257 31 H -0.260 1.260 32 H 0.135 0.865 33 H 0.129 0.871 34 H 0.129 0.871 35 H 0.129 0.871 36 H 0.078 0.922 37 H 0.103 0.897 38 H 0.380 0.620 39 H 0.105 0.895 40 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.113 0.941 0.648 8.193 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.083 4.083 2 N -0.335 5.335 3 C 0.306 3.694 4 O -0.376 6.376 5 C -0.036 4.036 6 O -0.190 6.190 7 C 0.106 3.894 8 C -0.146 4.146 9 C -0.175 4.175 10 O -0.325 6.325 11 Si 0.591 3.409 12 C -0.101 4.101 13 C -0.169 4.169 14 C -0.090 4.090 15 C -0.231 4.231 16 C 0.017 3.983 17 H 0.136 0.864 18 C -0.177 4.177 19 C 0.010 3.990 20 H 0.105 0.895 21 O -0.363 6.363 22 C -0.216 4.216 23 H 0.084 0.916 24 H 0.093 0.907 25 H 0.102 0.898 26 H 0.111 0.889 27 H 0.112 0.888 28 H 0.136 0.864 29 H 0.216 0.784 30 H -0.182 1.182 31 H -0.185 1.185 32 H 0.153 0.847 33 H 0.147 0.853 34 H 0.146 0.854 35 H 0.146 0.854 36 H 0.097 0.903 37 H 0.122 0.878 38 H 0.227 0.773 39 H 0.123 0.877 40 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -5.952 1.090 1.135 6.156 hybrid contribution -1.267 -0.354 -1.599 2.071 sum -7.219 0.736 -0.464 7.271 Atomic orbital electron populations 1.22138 0.79384 1.04037 1.02693 1.47408 1.06810 1.04910 1.74353 1.20014 0.88078 0.84416 0.76898 1.90800 1.13399 1.86661 1.46719 1.22506 0.92059 0.85278 1.03779 1.86235 1.33411 1.11248 1.88111 1.18793 0.91461 0.83965 0.95165 1.19647 0.96156 0.91124 1.07707 1.24909 0.92236 1.11841 0.88536 1.86709 1.81979 1.47569 1.16283 0.95110 0.80417 0.75148 0.90249 1.21056 0.95975 0.95511 0.97543 1.21065 0.93023 0.99316 1.03508 1.21026 1.00113 0.91702 0.96188 1.21280 0.93455 0.98959 1.09410 1.21775 0.98084 0.81621 0.96795 0.86420 1.23502 0.98597 0.98063 0.97556 1.23738 0.97544 0.82018 0.95727 0.89494 1.86554 1.57221 1.20837 1.71731 1.24126 1.00918 0.98609 0.97947 0.91642 0.90669 0.89753 0.88892 0.88767 0.86420 0.78361 1.18175 1.18543 0.84744 0.85302 0.85356 0.85366 0.90324 0.87821 0.77292 0.87685 0.90533 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.26 8.65 59.84 0.52 0.26 16 2 N -0.60 0.28 3.08 -172.90 -0.53 -0.26 16 3 C 0.52 1.27 7.75 -10.99 -0.09 1.19 16 4 O -0.50 -3.73 15.98 -14.35 -0.23 -3.96 16 5 C 0.04 0.00 3.77 36.00 0.14 0.13 16 6 O -0.28 -1.00 9.00 -39.32 -0.35 -1.35 16 7 C 0.15 0.32 6.66 -39.22 -0.26 0.06 16 8 C -0.15 -0.26 5.27 -104.47 -0.55 -0.81 16 9 C -0.07 -0.16 2.38 36.00 0.09 -0.07 16 10 O -0.52 -2.18 12.88 -35.23 -0.45 -2.64 16 11 Si 0.69 0.25 30.26 -169.99 -5.14 -4.89 16 12 C -0.08 -0.01 8.66 -39.60 -0.34 -0.36 16 13 C -0.15 0.10 10.04 -39.56 -0.40 -0.30 16 14 C -0.07 0.06 10.04 -39.60 -0.40 -0.33 16 15 C -0.21 0.05 9.04 -39.43 -0.36 -0.31 16 16 C 0.12 0.02 4.46 -67.02 -0.30 -0.28 16 17 H 0.12 0.26 7.24 -51.93 -0.38 -0.12 16 18 C -0.14 0.03 7.57 -25.92 -0.20 -0.16 16 19 C 0.07 -0.11 4.55 -25.92 -0.12 -0.23 16 20 H 0.09 -0.31 5.56 -51.93 -0.29 -0.60 16 21 O -0.56 0.10 13.67 -35.23 -0.48 -0.38 16 22 C -0.18 0.27 7.13 -25.82 -0.18 0.09 16 23 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 24 H 0.07 -0.44 6.44 -51.93 -0.33 -0.78 16 25 H 0.08 -0.44 4.84 -51.93 -0.25 -0.69 16 26 H 0.09 -0.24 6.93 -51.93 -0.36 -0.60 16 27 H 0.09 -0.26 7.62 -51.93 -0.40 -0.66 16 28 H 0.12 0.40 7.83 -51.93 -0.41 -0.01 16 29 H 0.37 0.25 8.70 45.56 0.40 0.64 16 30 H -0.26 -0.98 7.11 56.52 0.40 -0.58 16 31 H -0.26 -0.35 6.67 56.52 0.38 0.03 16 32 H 0.14 -0.17 4.87 -52.49 -0.26 -0.42 16 33 H 0.13 -0.33 8.06 -52.49 -0.42 -0.75 16 34 H 0.13 -0.39 8.06 -52.48 -0.42 -0.81 16 35 H 0.13 -0.36 6.30 -52.49 -0.33 -0.69 16 36 H 0.08 -0.02 8.14 -51.93 -0.42 -0.44 16 37 H 0.10 0.04 8.14 -51.93 -0.42 -0.38 16 38 H 0.38 -1.64 9.12 45.56 0.42 -1.22 16 39 H 0.10 -0.11 8.14 -51.93 -0.42 -0.53 16 40 H 0.08 -0.18 7.36 -51.93 -0.38 -0.56 16 LS Contribution 326.11 15.07 4.91 4.91 Total: 0.00 -10.57 326.11 -9.06 -19.62 By element: Atomic # 1 Polarization: -5.61 SS G_CDS: -4.33 Total: -9.93 kcal Atomic # 6 Polarization: 1.32 SS G_CDS: -2.45 Total: -1.13 kcal Atomic # 7 Polarization: 0.28 SS G_CDS: -0.53 Total: -0.26 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -1.52 Total: -8.33 kcal Atomic # 14 Polarization: 0.25 SS G_CDS: -5.14 Total: -4.89 kcal Total LS contribution 4.91 Total: 4.91 kcal Total: -10.57 -9.06 -19.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -51.113 kcal (2) G-P(sol) polarization free energy of solvation -10.567 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -61.680 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.057 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.624 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds