Wall clock time and date at job start Sun Mar 7 2021 10:52:40 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46494 * 1 3 3 C 1.34779 * 120.00393 * 2 1 4 4 O 1.21282 * 120.00007 * 179.97438 * 3 2 1 5 5 C 1.50697 * 119.99738 * 359.97438 * 3 2 1 6 6 O 1.42907 * 109.47239 * 180.02562 * 5 3 2 7 7 C 1.35895 * 117.00283 * 180.02562 * 6 5 3 8 8 C 1.38711 * 120.05477 * 179.72491 * 7 6 5 9 9 C 1.50696 * 120.03173 * 359.97438 * 8 7 6 10 10 O 1.42900 * 109.46861 * 75.00071 * 9 8 7 11 11 Si 1.86292 * 109.47228 * 194.99974 * 9 8 7 12 12 C 1.38173 * 119.93977 * 179.67653 * 8 7 6 13 13 C 1.38242 * 120.05614 * 0.61832 * 12 8 7 14 14 C 1.38286 * 120.11233 * 359.67780 * 13 12 8 15 15 C 1.38131 * 120.05693 * 0.02562 * 14 13 12 16 16 C 1.46496 * 120.00056 * 179.97438 * 2 1 3 17 17 H 1.09000 * 112.91246 * 168.75089 * 16 2 1 18 18 C 1.53786 * 113.61518 * 300.00330 * 16 2 1 19 19 C 1.53781 * 87.17350 * 89.15486 * 18 16 2 20 20 H 1.08997 * 113.61223 * 270.84552 * 19 18 16 21 21 O 1.42901 * 113.61346 * 139.93765 * 19 18 16 22 22 C 1.53782 * 87.08260 * 25.39213 * 19 18 16 23 23 H 1.09000 * 109.47426 * 270.00838 * 1 2 3 24 24 H 1.09001 * 109.46761 * 30.00016 * 1 2 3 25 25 H 1.08998 * 109.47402 * 149.99728 * 1 2 3 26 26 H 1.09002 * 109.47133 * 300.00171 * 5 3 2 27 27 H 1.09000 * 109.47625 * 60.00422 * 5 3 2 28 28 H 1.09003 * 109.46997 * 315.00188 * 9 8 7 29 29 H 0.96703 * 114.00242 * 60.00226 * 10 9 8 30 30 H 1.48507 * 110.00131 * 179.97438 * 11 9 8 31 31 H 1.48500 * 110.00223 * 301.31845 * 11 9 8 32 32 H 1.08002 * 119.97135 * 180.32038 * 12 8 7 33 33 H 1.08001 * 119.94405 * 179.70378 * 13 12 8 34 34 H 1.08004 * 119.97454 * 180.02562 * 14 13 12 35 35 H 1.07995 * 120.02985 * 179.97438 * 15 14 13 36 36 H 1.09002 * 113.61357 * 334.56403 * 18 16 2 37 37 H 1.09002 * 113.61608 * 203.74565 * 18 16 2 38 38 H 0.96705 * 113.99992 * 179.97438 * 21 19 18 39 39 H 1.08997 * 113.61668 * 89.11298 * 22 19 18 40 40 H 1.08998 * 113.61674 * 219.93807 * 22 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.1389 1.1672 0.0000 4 8 3.3517 1.1671 0.0005 5 6 1.3855 2.4723 -0.0006 6 8 2.3141 3.5585 -0.0011 7 6 1.7948 4.8143 -0.0011 8 6 2.6387 5.9151 0.0042 9 6 4.1330 5.7198 0.0106 10 8 4.5658 5.3142 -1.2895 11 14 4.9665 7.3209 0.4711 12 6 2.1081 7.1909 -0.0026 13 6 0.7375 7.3707 -0.0017 14 6 -0.1060 6.2749 -0.0008 15 6 0.4194 4.9974 -0.0002 16 6 2.1974 -1.2687 0.0006 17 1 3.2624 -1.1439 -0.1953 18 6 1.8953 -2.1540 1.2212 19 6 0.7441 -2.7599 0.4012 20 1 -0.1989 -2.2244 0.5105 21 8 0.6043 -4.1723 0.5677 22 6 1.5355 -2.3633 -0.8562 23 1 -0.3634 0.0002 1.0276 24 1 -0.3633 0.8900 -0.5138 25 1 -0.3634 -0.8899 -0.5139 26 1 0.7591 2.5298 -0.8908 27 1 0.7585 2.5303 0.8892 28 1 4.3958 4.9511 0.7374 29 1 4.3644 5.9519 -1.9879 30 1 6.4407 7.1414 0.4816 31 1 4.5908 8.3851 -0.4940 32 1 2.7648 8.0483 -0.0037 33 1 0.3247 8.3687 -0.0022 34 1 -1.1765 6.4180 -0.0006 35 1 -0.2398 4.1419 0.0009 36 1 1.5615 -1.5940 2.0948 37 1 2.6885 -2.8651 1.4520 38 1 -0.1184 -4.5592 0.0547 39 1 2.2311 -3.1312 -1.1947 40 1 0.9113 -1.9736 -1.6603 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16982422_2989392.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:52:40 Heat of formation + Delta-G solvation = -74.750873 kcal Electronic energy + Delta-G solvation = -23872.343799 eV Core-core repulsion = 20235.083162 eV Total energy + Delta-G solvation = -3637.260637 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 294.135 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -41.95473 -41.26132 -39.79959 -38.48621 -37.61945 -36.75168 -34.72970 -32.75081 -31.25539 -29.49704 -28.49930 -26.85431 -26.70294 -25.02436 -23.45973 -22.60880 -21.55659 -19.90430 -19.56445 -18.87082 -18.22753 -17.94449 -17.64341 -17.22377 -16.92869 -16.62604 -16.19738 -16.00573 -15.73698 -15.44523 -15.23100 -15.03526 -14.67413 -14.32533 -14.18801 -13.79483 -13.57306 -13.53805 -13.38970 -13.15737 -13.05278 -12.65084 -12.53642 -12.50207 -12.13983 -11.88867 -11.69210 -11.46098 -11.01801 -10.76851 -10.54467 -9.97423 -9.86060 -9.22210 -4.96303 0.23824 0.42102 1.27820 1.29534 1.31176 1.53125 1.92686 2.38662 2.70265 3.20765 3.26250 3.39749 3.44502 3.54234 3.69737 3.75889 3.80859 3.93071 3.93442 3.97002 4.11644 4.12294 4.30816 4.37205 4.49123 4.53628 4.54938 4.65148 4.65826 4.69080 4.76932 4.83231 4.86994 4.98356 5.04515 5.28542 5.38037 5.45121 5.53627 5.76151 6.07983 6.34540 6.51853 6.87787 6.91435 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.047 3.953 2 N -0.590 5.590 3 C 0.510 3.490 4 O -0.571 6.571 5 C 0.043 3.957 6 O -0.315 6.315 7 C 0.128 3.872 8 C -0.165 4.165 9 C -0.084 4.084 10 O -0.550 6.550 11 Si 0.784 3.216 12 C -0.088 4.088 13 C -0.154 4.154 14 C -0.073 4.073 15 C -0.211 4.211 16 C 0.111 3.889 17 H 0.084 0.916 18 C -0.144 4.144 19 C 0.080 3.920 20 H 0.116 0.884 21 O -0.581 6.581 22 C -0.167 4.167 23 H 0.082 0.918 24 H 0.098 0.902 25 H 0.098 0.902 26 H 0.122 0.878 27 H 0.125 0.875 28 H 0.094 0.906 29 H 0.381 0.619 30 H -0.309 1.309 31 H -0.263 1.263 32 H 0.146 0.854 33 H 0.151 0.849 34 H 0.155 0.845 35 H 0.155 0.845 36 H 0.079 0.921 37 H 0.089 0.911 38 H 0.397 0.603 39 H 0.096 0.904 40 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.614 1.832 0.555 11.771 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 N -0.323 5.323 3 C 0.299 3.701 4 O -0.449 6.449 5 C -0.035 4.035 6 O -0.228 6.228 7 C 0.083 3.917 8 C -0.166 4.166 9 C -0.192 4.192 10 O -0.357 6.357 11 Si 0.688 3.312 12 C -0.106 4.106 13 C -0.172 4.172 14 C -0.091 4.091 15 C -0.229 4.229 16 C 0.007 3.993 17 H 0.102 0.898 18 C -0.183 4.183 19 C 0.021 3.979 20 H 0.133 0.867 21 O -0.389 6.389 22 C -0.206 4.206 23 H 0.100 0.900 24 H 0.117 0.883 25 H 0.117 0.883 26 H 0.139 0.861 27 H 0.143 0.857 28 H 0.112 0.888 29 H 0.230 0.770 30 H -0.237 1.237 31 H -0.189 1.189 32 H 0.163 0.837 33 H 0.169 0.831 34 H 0.173 0.827 35 H 0.173 0.827 36 H 0.097 0.903 37 H 0.107 0.893 38 H 0.248 0.752 39 H 0.114 0.886 40 H 0.111 0.889 Dipole moment (debyes) X Y Z Total from point charges -9.552 1.947 1.031 9.802 hybrid contribution -0.204 -0.714 -1.573 1.740 sum -9.756 1.233 -0.543 9.848 Atomic orbital electron populations 1.22521 0.76441 1.05982 1.04408 1.47482 1.08499 1.03723 1.72614 1.20664 0.87562 0.86018 0.75877 1.90766 1.16296 1.87661 1.50220 1.22719 0.91424 0.82929 1.06397 1.86189 1.35517 1.12465 1.88651 1.19083 0.92728 0.83452 0.96485 1.19712 0.95502 0.92181 1.09178 1.25232 0.93909 1.12666 0.87362 1.86653 1.82464 1.49077 1.17542 0.94030 0.75771 0.72816 0.88619 1.21195 0.96868 0.94981 0.97535 1.21412 0.92622 1.00657 1.02463 1.21411 1.01505 0.91222 0.94975 1.21590 0.92587 1.00419 1.08333 1.21727 0.96967 0.82595 0.98027 0.89783 1.23487 0.99245 0.97940 0.97587 1.23749 0.97937 0.81795 0.94389 0.86678 1.86507 1.58498 1.21534 1.72393 1.24040 1.00715 0.97405 0.98405 0.89979 0.88323 0.88326 0.86089 0.85725 0.88769 0.77007 1.23732 1.18894 0.83660 0.83145 0.82692 0.82704 0.90265 0.89278 0.75210 0.88585 0.88949 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.05 -0.51 8.65 127.77 1.11 0.59 16 2 N -0.59 0.35 3.08 -819.31 -2.53 -2.18 16 3 C 0.51 3.34 7.75 87.66 0.68 4.01 16 4 O -0.57 -10.79 15.98 16.00 0.26 -10.53 16 5 C 0.04 -0.01 3.77 71.24 0.27 0.25 16 6 O -0.32 -2.80 9.00 -73.33 -0.66 -3.46 16 7 C 0.13 0.61 6.66 22.51 0.15 0.76 16 8 C -0.16 -0.76 5.27 -19.77 -0.10 -0.87 16 9 C -0.08 -0.61 2.38 71.23 0.17 -0.45 16 10 O -0.55 -6.23 12.88 -148.98 -1.92 -8.14 16 11 Si 0.78 1.45 30.26 68.60 2.08 3.53 16 12 C -0.09 0.02 8.66 22.26 0.19 0.21 16 13 C -0.15 0.48 10.04 22.28 0.22 0.71 16 14 C -0.07 0.31 10.04 22.26 0.22 0.53 16 15 C -0.21 0.44 9.04 22.37 0.20 0.65 16 16 C 0.11 0.23 4.46 45.58 0.20 0.43 16 17 H 0.08 0.73 7.24 -2.39 -0.02 0.71 16 18 C -0.14 -0.10 7.57 31.12 0.24 0.13 16 19 C 0.08 -0.32 4.55 31.12 0.14 -0.17 16 20 H 0.12 -1.11 5.56 -2.39 -0.01 -1.12 16 21 O -0.58 0.59 13.67 -148.98 -2.04 -1.44 16 22 C -0.17 0.48 7.13 31.18 0.22 0.70 16 23 H 0.08 -1.09 8.14 -2.39 -0.02 -1.11 16 24 H 0.10 -1.49 6.44 -2.39 -0.02 -1.51 16 25 H 0.10 -1.32 4.84 -2.39 -0.01 -1.33 16 26 H 0.12 -0.81 6.93 -2.39 -0.02 -0.83 16 27 H 0.13 -0.90 7.62 -2.39 -0.02 -0.92 16 28 H 0.09 1.03 7.83 -2.39 -0.02 1.01 16 29 H 0.38 1.38 8.70 -74.06 -0.64 0.74 16 30 H -0.31 -3.17 7.11 99.48 0.71 -2.46 16 31 H -0.26 -0.58 6.67 99.48 0.66 0.09 16 32 H 0.15 -0.48 4.87 -2.91 -0.01 -0.49 16 33 H 0.15 -1.17 8.06 -2.91 -0.02 -1.20 16 34 H 0.16 -1.51 8.06 -2.91 -0.02 -1.53 16 35 H 0.16 -1.33 6.30 -2.91 -0.02 -1.35 16 36 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 37 H 0.09 0.30 8.14 -2.39 -0.02 0.28 16 38 H 0.40 -3.92 9.12 -74.05 -0.68 -4.60 16 39 H 0.10 -0.09 8.14 -2.39 -0.02 -0.11 16 40 H 0.09 -0.55 7.36 -2.39 -0.02 -0.57 16 Total: 0.00 -29.93 326.11 -1.13 -31.06 By element: Atomic # 1 Polarization: -16.08 SS G_CDS: -0.23 Total: -16.32 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 3.91 Total: 7.49 kcal Atomic # 7 Polarization: 0.35 SS G_CDS: -2.53 Total: -2.18 kcal Atomic # 8 Polarization: -19.22 SS G_CDS: -4.36 Total: -23.58 kcal Atomic # 14 Polarization: 1.45 SS G_CDS: 2.08 Total: 3.53 kcal Total: -29.93 -1.13 -31.06 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16982422_2989392.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -43.687 kcal (2) G-P(sol) polarization free energy of solvation -29.933 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.620 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.131 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.064 kcal (6) G-S(sol) free energy of system = (1) + (5) -74.751 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds