Wall clock time and date at job start Sun Mar 7 2021 09:19:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 Si 1.86306 * 109.46757 * 2 1 4 4 C 1.86293 * 109.90721 * 298.65851 * 3 2 1 5 5 C 1.53003 * 109.47391 * 298.39315 * 4 3 2 6 6 C 1.87344 * 109.92131 * 59.76971 * 3 2 1 7 7 C 1.53818 * 107.31175 * 166.18630 * 6 3 2 8 8 N 1.46309 * 109.23007 * 306.11075 * 7 6 3 9 9 C 1.34775 * 119.08586 * 252.35345 * 8 7 6 10 10 O 1.21279 * 120.00031 * 359.97438 * 9 8 7 11 11 C 1.50698 * 119.99979 * 179.97438 * 9 8 7 12 12 O 1.42896 * 109.47034 * 180.02562 * 11 9 8 13 13 C 1.35924 * 116.99764 * 180.02562 * 12 11 9 14 14 C 1.38671 * 120.05726 * 359.97438 * 13 12 11 15 15 C 1.38194 * 119.95229 * 180.02562 * 14 13 12 16 16 C 1.38241 * 120.07195 * 359.97438 * 15 14 13 17 17 C 1.50692 * 119.94067 * 180.02562 * 16 15 14 18 18 O 1.42910 * 109.47336 * 299.99910 * 17 16 15 19 19 Si 1.86306 * 109.47117 * 180.02562 * 17 16 15 20 20 H 1.48491 * 109.47190 * 59.99539 * 19 17 16 21 21 H 1.48501 * 109.47006 * 180.02562 * 19 17 16 22 22 H 1.48500 * 109.46695 * 299.99820 * 19 17 16 23 23 C 1.38293 * 120.11473 * 359.79009 * 16 15 14 24 24 C 1.38190 * 120.04388 * 0.46501 * 23 16 15 25 25 Br 1.89107 * 120.03243 * 179.79109 * 24 23 16 26 26 C 1.46295 * 121.82541 * 72.62863 * 8 7 6 27 27 C 1.54321 * 108.95795 * 287.40238 * 26 8 7 28 28 H 1.09000 * 109.46874 * 63.23314 * 1 2 3 29 29 H 1.08999 * 109.47141 * 183.23352 * 1 2 3 30 30 H 1.09003 * 109.47257 * 303.23127 * 1 2 3 31 31 H 1.08999 * 109.47330 * 240.00482 * 2 1 3 32 32 H 1.08993 * 109.47214 * 119.99801 * 2 1 3 33 33 H 1.08995 * 109.47490 * 58.39689 * 4 3 2 34 34 H 1.09001 * 109.47152 * 178.39684 * 4 3 2 35 35 H 1.09003 * 109.47227 * 298.44350 * 5 4 3 36 36 H 1.09002 * 109.47193 * 58.44210 * 5 4 3 37 37 H 1.09003 * 109.47320 * 178.44259 * 5 4 3 38 38 H 1.09003 * 109.88821 * 46.73710 * 6 3 2 39 39 H 1.09002 * 109.88866 * 285.63905 * 6 3 2 40 40 H 1.08999 * 109.51698 * 186.18186 * 7 6 3 41 41 H 1.09004 * 109.55490 * 66.05980 * 7 6 3 42 42 H 1.09003 * 109.46857 * 60.00440 * 11 9 8 43 43 H 1.08996 * 109.47563 * 300.00375 * 11 9 8 44 44 H 1.07997 * 120.02696 * 0.03988 * 14 13 12 45 45 H 1.07997 * 119.96534 * 179.97438 * 15 14 13 46 46 H 1.08996 * 109.47641 * 59.99863 * 17 16 15 47 47 H 0.96696 * 113.99639 * 300.00641 * 18 17 16 48 48 H 1.07999 * 119.97328 * 180.23231 * 23 16 15 49 49 H 1.09003 * 109.51329 * 47.29699 * 26 8 7 50 50 H 1.08999 * 109.51054 * 167.44370 * 26 8 7 51 51 H 1.08997 * 109.97539 * 294.51686 * 27 26 8 52 52 H 1.09000 * 109.81839 * 173.41079 * 27 26 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 14 2.1509 1.7566 0.0000 4 6 1.5703 2.6346 -1.5370 5 6 2.1406 1.9331 -2.7714 6 6 1.5276 2.6539 1.5218 7 6 2.3384 3.9547 1.6503 8 7 3.7661 3.6353 1.6432 9 6 4.4665 3.7393 2.7900 10 8 3.9125 4.0939 3.8088 11 6 5.9380 3.4148 2.8062 12 8 6.4519 3.5992 4.1268 13 6 7.7743 3.3474 4.3150 14 6 8.5604 2.9313 3.2512 15 6 9.9046 2.6755 3.4451 16 6 10.4662 2.8345 4.6982 17 6 11.9324 2.5553 4.9063 18 8 12.2100 1.1936 4.5730 19 14 12.3756 2.8601 6.6900 20 1 11.5726 1.9636 7.5597 21 1 13.8206 2.5855 6.8948 22 1 12.0870 4.2749 7.0369 23 6 9.6859 3.2541 5.7602 24 6 8.3402 3.5061 5.5728 25 35 7.2723 4.0741 7.0264 26 6 4.4558 3.2120 0.4245 27 6 4.0228 1.7719 0.0779 28 1 -0.3633 0.4628 -0.9176 29 1 -0.3633 -1.0260 0.0580 30 1 -0.3634 0.5632 0.8596 31 1 1.8934 -0.5137 -0.8900 32 1 1.8933 -0.5138 0.8899 33 1 0.4813 2.6137 -1.5780 34 1 1.9133 3.6690 -1.5161 35 1 3.2294 1.9783 -2.7444 36 1 1.8202 0.8913 -2.7778 37 1 1.7786 2.4301 -3.6715 38 1 1.6785 2.0341 2.4057 39 1 0.4688 2.8867 1.4074 40 1 2.0815 4.4531 2.5851 41 1 2.1083 4.6124 0.8121 42 1 6.4633 4.0752 2.1161 43 1 6.0852 2.3789 2.5008 44 1 8.1227 2.8075 2.2717 45 1 10.5169 2.3510 2.6168 46 1 12.5218 3.2131 4.2676 47 1 11.7190 0.5511 5.1031 48 1 10.1279 3.3811 6.7374 49 1 4.1914 3.8808 -0.3946 50 1 5.5333 3.2422 0.5867 51 1 4.3675 1.0835 0.8495 52 1 4.4365 1.4841 -0.8887 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17051536_6201210.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:19:53 Heat of formation + Delta-G solvation = -110.684426 kcal Electronic energy + Delta-G solvation = -31361.241444 eV Core-core repulsion = 27110.004841 eV Total energy + Delta-G solvation = -4251.236603 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 429.093 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -41.79757 -40.89677 -39.23133 -37.46090 -37.16696 -33.92475 -33.54144 -33.15600 -32.73587 -32.15061 -30.99020 -30.24817 -29.09716 -26.43927 -24.74442 -24.48335 -23.63667 -23.58375 -23.26511 -22.41235 -20.34800 -19.70691 -18.57492 -18.02560 -17.60677 -17.56033 -16.79852 -16.62529 -16.33115 -16.10414 -15.76071 -15.73919 -15.56974 -15.19801 -15.06376 -15.03021 -14.54495 -14.49733 -14.41529 -14.38569 -14.20703 -13.98821 -13.76327 -13.62485 -13.46183 -13.27303 -12.98968 -12.93408 -12.54797 -12.49497 -12.36654 -12.31659 -12.28340 -12.22478 -12.15529 -11.91609 -11.80138 -11.70056 -11.05213 -10.91251 -10.59617 -10.56736 -10.51834 -10.43521 -10.01589 -9.81667 -9.30674 -0.06803 0.03932 0.70834 1.08649 1.30743 1.39376 1.44918 1.46244 1.51888 1.62393 1.67369 1.87498 2.23723 2.34887 2.40039 3.18297 3.36405 3.44636 3.57970 3.67978 3.77633 3.84074 3.85287 3.90924 3.98954 4.13692 4.18409 4.22588 4.26878 4.27019 4.29191 4.32688 4.37000 4.40930 4.52991 4.56420 4.57697 4.63661 4.69152 4.73554 4.85383 4.94717 4.96057 5.03060 5.04367 5.13159 5.18245 5.22595 5.23462 5.31749 5.35369 5.41587 5.44698 5.97174 6.15709 6.46046 7.04013 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.144 4.144 2 C -0.411 4.411 3 Si 1.003 2.997 4 C -0.411 4.411 5 C -0.144 4.144 6 C -0.425 4.425 7 C 0.122 3.878 8 N -0.611 5.611 9 C 0.515 3.485 10 O -0.506 6.506 11 C 0.036 3.964 12 O -0.274 6.274 13 C 0.162 3.838 14 C -0.205 4.205 15 C -0.032 4.032 16 C -0.153 4.153 17 C -0.072 4.072 18 O -0.538 6.538 19 Si 0.934 3.066 20 H -0.247 1.247 21 H -0.249 1.249 22 H -0.246 1.246 23 C -0.057 4.057 24 C -0.119 4.119 25 Br -0.025 7.025 26 C 0.112 3.888 27 C -0.429 4.429 28 H 0.055 0.945 29 H 0.053 0.947 30 H 0.055 0.945 31 H 0.074 0.926 32 H 0.073 0.927 33 H 0.076 0.924 34 H 0.073 0.927 35 H 0.055 0.945 36 H 0.055 0.945 37 H 0.053 0.947 38 H 0.080 0.920 39 H 0.088 0.912 40 H 0.096 0.904 41 H 0.077 0.923 42 H 0.097 0.903 43 H 0.097 0.903 44 H 0.139 0.861 45 H 0.140 0.860 46 H 0.121 0.879 47 H 0.378 0.622 48 H 0.136 0.864 49 H 0.084 0.916 50 H 0.083 0.917 51 H 0.081 0.919 52 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.911 -1.860 -6.618 6.934 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.201 4.201 2 C -0.497 4.497 3 Si 1.197 2.803 4 C -0.497 4.497 5 C -0.201 4.201 6 C -0.511 4.511 7 C 0.001 3.999 8 N -0.347 5.347 9 C 0.301 3.699 10 O -0.379 6.379 11 C -0.042 4.042 12 O -0.186 6.186 13 C 0.113 3.887 14 C -0.224 4.224 15 C -0.050 4.050 16 C -0.154 4.154 17 C -0.183 4.183 18 O -0.343 6.343 19 Si 0.757 3.243 20 H -0.171 1.171 21 H -0.173 1.173 22 H -0.170 1.170 23 C -0.077 4.077 24 C -0.199 4.199 25 Br 0.061 6.939 26 C -0.011 4.011 27 C -0.515 4.515 28 H 0.074 0.926 29 H 0.072 0.928 30 H 0.074 0.926 31 H 0.093 0.907 32 H 0.092 0.908 33 H 0.095 0.905 34 H 0.092 0.908 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.073 0.927 38 H 0.099 0.901 39 H 0.107 0.893 40 H 0.115 0.885 41 H 0.095 0.905 42 H 0.115 0.885 43 H 0.115 0.885 44 H 0.157 0.843 45 H 0.158 0.842 46 H 0.139 0.861 47 H 0.225 0.775 48 H 0.154 0.846 49 H 0.102 0.898 50 H 0.101 0.899 51 H 0.100 0.900 52 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 0.644 -0.937 -4.939 5.068 hybrid contribution -0.228 -0.560 -0.719 0.939 sum 0.416 -1.497 -5.658 5.868 Atomic orbital electron populations 1.21341 0.94934 1.02096 1.01751 1.25985 1.01040 1.18089 1.04630 0.79497 0.66488 0.67552 0.66799 1.26006 1.05545 1.06553 1.11604 1.21352 1.00697 1.00433 0.97597 1.26715 1.04439 1.04292 1.15663 1.21192 0.77765 0.96709 1.04280 1.47920 1.09993 1.68031 1.08731 1.19978 0.87831 0.78215 0.83847 1.90789 1.70671 1.44469 1.32006 1.22673 0.93647 1.03347 0.84541 1.86284 1.20316 1.82626 1.29363 1.18637 0.83271 0.93959 0.92794 1.21295 0.95266 1.07437 0.98427 1.20938 0.93691 0.93639 0.96765 1.20227 0.96815 1.04584 0.93797 1.24850 0.93195 0.86945 1.13295 1.86517 1.69140 1.14087 1.64541 0.85882 0.81584 0.81966 0.74898 1.17054 1.17286 1.17007 1.20885 0.91127 0.96436 0.99257 1.20972 0.94808 1.12008 0.92120 1.96810 1.68550 1.88916 1.39664 1.21507 0.97157 0.95589 0.86810 1.26820 1.21400 0.98277 1.05031 0.92554 0.92779 0.92581 0.90675 0.90825 0.90501 0.90811 0.92631 0.92585 0.92745 0.90101 0.89343 0.88545 0.90503 0.88543 0.88484 0.84320 0.84237 0.86094 0.77518 0.84629 0.89816 0.89876 0.90030 0.89017 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.14 0.22 9.29 37.16 0.35 0.57 16 2 C -0.41 0.88 5.17 37.16 0.19 1.08 16 3 Si 1.00 -3.62 8.66 -169.99 -1.47 -5.10 16 4 C -0.41 1.29 5.17 37.16 0.19 1.49 16 5 C -0.14 0.40 9.29 37.16 0.35 0.75 16 6 C -0.42 0.72 5.22 37.58 0.20 0.91 16 7 C 0.12 -0.09 5.87 -3.72 -0.02 -0.11 16 8 N -0.61 0.55 2.61 -172.68 -0.45 0.10 16 9 C 0.52 1.00 7.72 -10.99 -0.08 0.91 16 10 O -0.51 -3.37 15.78 -14.35 -0.23 -3.60 16 11 C 0.04 -0.02 3.53 36.00 0.13 0.11 16 12 O -0.27 -0.83 9.01 -39.41 -0.35 -1.18 16 13 C 0.16 0.30 6.68 -39.20 -0.26 0.04 16 14 C -0.20 0.16 9.04 -39.44 -0.36 -0.19 16 15 C -0.03 0.03 9.60 -39.60 -0.38 -0.35 16 16 C -0.15 0.05 5.39 -104.60 -0.56 -0.52 16 17 C -0.07 0.09 2.82 36.00 0.10 0.20 16 18 O -0.54 0.43 12.77 -35.23 -0.45 -0.02 16 19 Si 0.93 -0.69 25.07 -169.99 -4.26 -4.95 16 20 H -0.25 0.09 7.11 56.52 0.40 0.49 16 21 H -0.25 -0.15 7.11 56.52 0.40 0.26 16 22 H -0.25 0.00 7.11 56.52 0.40 0.41 16 23 C -0.06 -0.06 8.40 -39.58 -0.33 -0.39 16 24 C -0.12 -0.32 6.24 -39.38 -0.25 -0.56 16 25 Br -0.02 -0.10 33.16 -68.01 -2.26 -2.35 16 26 C 0.11 -0.44 5.78 -3.46 -0.02 -0.46 16 27 C -0.43 1.75 5.24 37.85 0.20 1.95 16 28 H 0.06 -0.12 8.03 -51.93 -0.42 -0.54 16 29 H 0.05 -0.05 8.14 -51.93 -0.42 -0.48 16 30 H 0.06 -0.10 7.88 -51.93 -0.41 -0.51 16 31 H 0.07 -0.18 7.79 -51.93 -0.40 -0.58 16 32 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 33 H 0.08 -0.21 7.96 -51.93 -0.41 -0.63 16 34 H 0.07 -0.25 7.96 -51.93 -0.41 -0.67 16 35 H 0.05 -0.21 7.50 -51.93 -0.39 -0.60 16 36 H 0.06 -0.16 7.76 -51.93 -0.40 -0.57 16 37 H 0.05 -0.12 8.14 -51.93 -0.42 -0.54 16 38 H 0.08 -0.01 7.99 -51.93 -0.41 -0.43 16 39 H 0.09 -0.21 7.99 -51.93 -0.41 -0.62 16 40 H 0.10 0.15 6.91 -51.93 -0.36 -0.21 16 41 H 0.08 -0.21 8.05 -51.93 -0.42 -0.63 16 42 H 0.10 -0.32 7.02 -51.93 -0.36 -0.68 16 43 H 0.10 -0.30 7.50 -51.93 -0.39 -0.69 16 44 H 0.14 -0.51 6.30 -52.49 -0.33 -0.84 16 45 H 0.14 -0.36 8.06 -52.49 -0.42 -0.78 16 46 H 0.12 -0.29 7.96 -51.93 -0.41 -0.70 16 47 H 0.38 -1.41 8.70 45.56 0.40 -1.01 16 48 H 0.14 0.04 4.87 -52.49 -0.26 -0.22 16 49 H 0.08 -0.43 8.05 -51.93 -0.42 -0.85 16 50 H 0.08 -0.46 5.77 -51.93 -0.30 -0.76 16 51 H 0.08 -0.30 7.99 -51.93 -0.41 -0.71 16 52 H 0.09 -0.47 7.49 -51.93 -0.39 -0.86 16 LS Contribution 428.60 15.07 6.46 6.46 Total: 0.00 -8.29 428.60 -11.39 -19.68 By element: Atomic # 1 Polarization: -6.64 SS G_CDS: -7.81 Total: -14.45 kcal Atomic # 6 Polarization: 5.98 SS G_CDS: -0.57 Total: 5.41 kcal Atomic # 7 Polarization: 0.55 SS G_CDS: -0.45 Total: 0.10 kcal Atomic # 8 Polarization: -3.77 SS G_CDS: -1.03 Total: -4.80 kcal Atomic # 14 Polarization: -4.31 SS G_CDS: -5.73 Total: -10.04 kcal Atomic # 35 Polarization: -0.10 SS G_CDS: -2.26 Total: -2.35 kcal Total LS contribution 6.46 Total: 6.46 kcal Total: -8.29 -11.39 -19.68 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17051536_6201210.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -91.005 kcal (2) G-P(sol) polarization free energy of solvation -8.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.291 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.680 kcal (6) G-S(sol) free energy of system = (1) + (5) -110.684 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds