Wall clock time and date at job start Sun Mar 7 2021 11:22:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.47462 * 2 1 4 4 C 1.50698 * 109.46844 * 120.00398 * 2 1 3 5 5 C 1.38270 * 119.94661 * 64.99707 * 4 2 1 6 6 C 1.38149 * 120.05554 * 180.02562 * 5 4 2 7 7 C 1.38730 * 119.94305 * 359.97438 * 6 5 4 8 8 O 1.35904 * 120.05324 * 180.02562 * 7 6 5 9 9 C 1.42899 * 116.99693 * 180.02562 * 8 7 6 10 10 C 1.50705 * 109.46858 * 179.97438 * 9 8 7 11 11 C 1.36420 * 125.79554 * 89.98333 * 10 9 8 12 12 C 1.47372 * 127.19421 * 0.03507 * 11 10 9 13 13 O 1.21609 * 120.00209 * 354.33819 * 12 11 10 14 14 N 1.34783 * 119.99736 * 174.33512 * 12 11 10 15 15 C 1.47536 * 125.65713 * 184.36547 * 14 12 11 16 16 C 1.55349 * 104.88921 * 156.01561 * 15 14 12 17 17 C 1.53952 * 101.33461 * 36.02490 * 16 15 14 18 18 C 1.52507 * 115.78733 * 94.93378 * 17 16 15 19 19 C 1.54017 * 86.67583 * 93.34373 * 18 17 16 20 20 O 1.42903 * 113.57184 * 269.85498 * 19 18 17 21 21 C 1.52492 * 115.80204 * 196.44903 * 17 16 15 22 22 C 1.47335 * 125.66167 * 4.67484 * 14 12 11 23 23 C 1.47018 * 105.61186 * 180.02562 * 11 10 9 24 24 C 1.34178 * 105.95467 * 0.02562 * 23 11 10 25 25 O 1.33647 * 125.80385 * 270.02291 * 10 9 8 26 26 C 1.38738 * 119.88865 * 0.27358 * 7 6 5 27 27 C 1.38136 * 119.94264 * 359.47360 * 26 7 6 28 28 H 0.96694 * 113.99839 * 300.00719 * 1 2 3 29 29 H 1.09006 * 109.47103 * 239.99886 * 2 1 3 30 30 H 1.48505 * 109.99656 * 178.68372 * 3 2 1 31 31 H 1.48499 * 110.00134 * 299.99859 * 3 2 1 32 32 H 1.08002 * 119.96909 * 359.97438 * 5 4 2 33 33 H 1.07999 * 120.02726 * 179.97438 * 6 5 4 34 34 H 1.08999 * 109.47123 * 59.99681 * 9 8 7 35 35 H 1.09001 * 109.47618 * 299.99636 * 9 8 7 36 36 H 1.09001 * 110.33350 * 274.98935 * 15 14 12 37 37 H 1.08999 * 110.33686 * 37.22666 * 15 14 12 38 38 H 1.09002 * 111.22672 * 277.95997 * 16 15 14 39 39 H 1.08999 * 110.96963 * 153.98461 * 16 15 14 40 40 H 1.09001 * 113.68003 * 207.78940 * 18 17 16 41 41 H 1.08998 * 113.68144 * 338.89457 * 18 17 16 42 42 H 1.09002 * 113.64523 * 139.09077 * 19 18 17 43 43 H 0.96700 * 113.99977 * 277.75334 * 20 19 18 44 44 H 1.08997 * 113.67915 * 21.11864 * 21 17 16 45 45 H 1.09008 * 113.67772 * 152.12732 * 21 17 16 46 46 H 1.09007 * 109.97454 * 301.28210 * 22 14 12 47 47 H 1.09001 * 109.97602 * 62.52518 * 22 14 12 48 48 H 1.08001 * 127.02646 * 180.02562 * 23 11 10 49 49 H 1.08010 * 125.43729 * 179.97438 * 24 23 11 50 50 H 1.08003 * 120.02381 * 179.71870 * 26 7 6 51 51 H 1.08007 * 119.97082 * 180.22625 * 27 26 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6839 -2.0606 1.3972 6 6 2.1428 -2.7141 2.5245 7 6 2.8529 -2.0146 3.4895 8 8 3.3058 -2.6553 4.5991 9 6 4.0289 -1.8720 5.5507 10 6 4.4478 -2.7451 6.7054 11 6 5.6151 -3.4455 6.7938 12 6 6.6999 -3.4984 5.7977 13 8 6.5616 -2.9550 4.7186 14 7 7.8454 -4.1491 6.0827 15 6 9.0410 -4.2038 5.2200 16 6 10.2196 -4.4951 6.1893 17 6 9.5497 -5.4378 7.2054 18 6 9.7231 -6.9297 6.9408 19 6 10.9466 -6.8617 7.8739 20 8 12.1686 -6.5685 7.1935 21 6 10.2922 -5.6283 8.5237 22 6 8.1090 -4.9290 7.3046 23 6 5.5648 -4.1363 8.0906 24 6 4.3934 -3.7918 8.6469 25 8 3.7384 -2.9655 7.8165 26 6 3.0953 -0.6588 3.3222 27 6 2.6388 -0.0112 2.1907 28 1 -0.3933 0.4418 0.7650 29 1 1.7924 -0.5139 -0.8900 30 1 3.5348 1.7700 0.0321 31 1 1.5617 2.4679 -1.2085 32 1 1.1307 -2.6046 0.6458 33 1 1.9490 -3.7686 2.6545 34 1 3.3925 -1.0665 5.9168 35 1 4.9137 -1.4485 5.0754 36 1 8.9431 -5.0049 4.4874 37 1 9.1907 -3.2474 4.7190 38 1 10.5676 -3.5823 6.6729 39 1 11.0366 -4.9962 5.6703 40 1 8.9090 -7.5409 7.3303 41 1 9.9739 -7.1646 5.9064 42 1 11.0315 -7.7153 8.5464 43 1 12.5848 -7.3388 6.7830 44 1 10.9959 -4.8272 8.7495 45 1 9.6394 -5.8683 9.3631 46 1 7.9983 -4.2934 8.1832 47 1 7.4193 -5.7709 7.3650 48 1 6.3170 -4.7880 8.5099 49 1 4.0348 -4.1259 9.6094 50 1 3.6440 -0.1112 4.0743 51 1 2.8305 1.0435 2.0583 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_4549634.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:22:38 Heat of formation + Delta-G solvation = -56.769750 kcal Electronic energy + Delta-G solvation = -35571.194031 eV Core-core repulsion = 30792.051123 eV Total energy + Delta-G solvation = -4779.142909 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 386.165 amu Computer time = 1.68 seconds Orbital eigenvalues (eV) -43.77465 -41.80233 -41.32764 -40.14292 -39.24755 -37.60847 -37.18872 -35.25988 -34.28172 -32.92924 -32.02360 -31.43028 -31.38813 -29.15792 -27.94785 -26.85877 -26.23557 -25.44216 -23.90447 -23.21264 -23.05174 -22.43598 -22.12895 -20.22010 -19.63428 -19.53877 -18.75470 -18.30038 -18.18594 -17.58766 -17.36368 -17.11601 -16.99489 -16.87683 -16.59663 -16.32124 -16.08118 -15.89858 -15.69513 -15.63019 -15.28099 -14.95156 -14.67644 -14.40138 -14.38417 -14.24449 -14.04800 -13.98599 -13.84966 -13.70371 -13.52316 -13.34193 -13.29652 -13.08440 -12.74722 -12.40502 -12.29895 -12.10144 -12.09580 -11.79815 -11.77956 -11.55162 -11.27632 -11.12660 -10.97634 -10.56224 -10.42797 -10.09201 -10.02561 -9.70073 -9.27743 -5.02245 -0.09164 0.23546 0.25822 0.99971 1.31213 1.46529 1.63091 1.81265 1.95106 2.01384 2.41312 2.61156 3.16070 3.25184 3.31207 3.36261 3.50910 3.54175 3.62680 3.66393 3.70933 3.76637 3.81584 3.87708 3.89789 3.91895 4.05133 4.15169 4.25471 4.26055 4.38417 4.40570 4.43498 4.45640 4.47159 4.61168 4.62867 4.65802 4.69678 4.76562 4.79827 4.89412 4.91996 4.94298 4.99572 5.10128 5.10937 5.14784 5.21663 5.23461 5.28782 5.33855 5.44024 5.65287 5.85862 6.22479 6.30156 6.78331 6.91313 6.91750 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.069 4.069 3 Si 0.776 3.224 4 C -0.161 4.161 5 C -0.058 4.058 6 C -0.164 4.164 7 C 0.124 3.876 8 O -0.323 6.323 9 C 0.137 3.863 10 C 0.042 3.958 11 C -0.221 4.221 12 C 0.591 3.409 13 O -0.576 6.576 14 N -0.610 5.610 15 C 0.105 3.895 16 C -0.097 4.097 17 C -0.089 4.089 18 C -0.154 4.154 19 C 0.080 3.920 20 O -0.570 6.570 21 C -0.116 4.116 22 C 0.107 3.893 23 C -0.209 4.209 24 C -0.006 4.006 25 O -0.173 6.173 26 C -0.206 4.206 27 C -0.074 4.074 28 H 0.395 0.605 29 H 0.105 0.895 30 H -0.290 1.290 31 H -0.297 1.297 32 H 0.139 0.861 33 H 0.132 0.868 34 H 0.106 0.894 35 H 0.101 0.899 36 H 0.066 0.934 37 H 0.064 0.936 38 H 0.075 0.925 39 H 0.095 0.905 40 H 0.106 0.894 41 H 0.069 0.931 42 H 0.085 0.915 43 H 0.396 0.604 44 H 0.071 0.929 45 H 0.121 0.879 46 H 0.091 0.909 47 H 0.087 0.913 48 H 0.194 0.806 49 H 0.256 0.744 50 H 0.149 0.851 51 H 0.153 0.847 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.945 -2.682 9.394 9.962 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.179 4.179 3 Si 0.683 3.317 4 C -0.162 4.162 5 C -0.076 4.076 6 C -0.182 4.182 7 C 0.079 3.921 8 O -0.237 6.237 9 C 0.063 3.937 10 C -0.011 4.011 11 C -0.226 4.226 12 C 0.382 3.618 13 O -0.458 6.458 14 N -0.342 5.342 15 C -0.017 4.017 16 C -0.135 4.135 17 C -0.090 4.090 18 C -0.192 4.192 19 C 0.020 3.980 20 O -0.378 6.378 21 C -0.153 4.153 22 C -0.015 4.015 23 C -0.227 4.227 24 C -0.072 4.072 25 O -0.069 6.069 26 C -0.224 4.224 27 C -0.091 4.091 28 H 0.245 0.755 29 H 0.122 0.878 30 H -0.217 1.217 31 H -0.225 1.225 32 H 0.157 0.843 33 H 0.150 0.850 34 H 0.124 0.876 35 H 0.119 0.881 36 H 0.084 0.916 37 H 0.082 0.918 38 H 0.094 0.906 39 H 0.114 0.886 40 H 0.125 0.875 41 H 0.088 0.912 42 H 0.103 0.897 43 H 0.246 0.754 44 H 0.090 0.910 45 H 0.140 0.860 46 H 0.109 0.891 47 H 0.105 0.895 48 H 0.211 0.789 49 H 0.272 0.728 50 H 0.166 0.834 51 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 1.949 -1.571 8.183 8.557 hybrid contribution 0.572 -1.218 -0.713 1.523 sum 2.521 -2.789 7.469 8.362 Atomic orbital electron populations 1.86460 1.17229 1.82203 1.50474 1.25111 0.85253 1.10703 0.96786 0.93806 0.77678 0.75422 0.84831 1.20362 1.02653 0.95053 0.98131 1.20952 0.96674 0.93988 0.96024 1.20623 1.02322 1.01053 0.94223 1.19196 0.94424 0.91793 0.86698 1.86051 1.68955 1.38998 1.29698 1.21099 0.98046 0.90805 0.83773 1.21987 0.90480 1.00384 0.88240 1.21267 0.96924 1.05747 0.98639 1.17193 0.81154 0.77901 0.85532 1.90778 1.81014 1.48606 1.25438 1.48381 1.13297 1.50464 1.22061 1.22405 0.83887 1.01608 0.93838 1.22445 0.95927 0.99439 0.95681 1.21963 0.93306 0.96085 0.97641 1.23589 0.99888 0.94499 1.01228 1.22803 0.83425 0.98030 0.93695 1.86431 1.37746 1.39957 1.73692 1.22979 0.98420 0.97996 0.95933 1.22467 0.96666 0.95379 0.86941 1.23634 1.00981 1.04998 0.93115 1.24995 0.92380 0.92635 0.97201 1.83790 1.44368 1.53668 1.25028 1.21427 1.06211 0.93296 1.01474 1.21016 0.95654 1.00074 0.92377 0.75490 0.87768 1.21684 1.22493 0.84321 0.84998 0.87599 0.88093 0.91556 0.91752 0.90630 0.88634 0.87541 0.91201 0.89724 0.75412 0.91042 0.86049 0.89061 0.89474 0.78950 0.72782 0.83367 0.83030 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.26 12.83 -148.98 -1.91 -3.17 16 2 C -0.07 -0.14 2.80 71.24 0.20 0.06 16 3 Si 0.78 -0.09 29.80 68.60 2.04 1.96 16 4 C -0.16 -0.61 5.35 -19.85 -0.11 -0.71 16 5 C -0.06 -0.33 9.68 22.26 0.22 -0.12 16 6 C -0.16 -1.31 9.99 22.37 0.22 -1.09 16 7 C 0.12 1.10 6.69 22.51 0.15 1.25 16 8 O -0.32 -3.51 10.12 -92.46 -0.94 -4.45 16 9 C 0.14 0.86 4.69 71.24 0.33 1.19 16 10 C 0.04 0.28 7.00 25.26 0.18 0.46 16 11 C -0.22 -1.40 6.24 -18.99 -0.12 -1.52 16 12 C 0.59 6.26 7.84 86.65 0.68 6.94 16 13 O -0.58 -10.26 15.21 -4.06 -0.06 -10.32 16 14 N -0.61 -2.91 3.34 -816.10 -2.72 -5.63 16 15 C 0.10 0.41 6.91 86.99 0.60 1.01 16 16 C -0.10 0.07 6.01 31.72 0.19 0.26 16 17 C -0.09 0.39 0.93 -52.17 -0.05 0.34 16 18 C -0.15 0.96 7.14 30.77 0.22 1.18 16 19 C 0.08 -0.50 5.27 31.26 0.16 -0.33 16 20 O -0.57 1.89 12.40 -148.98 -1.85 0.04 16 21 C -0.12 0.75 7.23 30.77 0.22 0.97 16 22 C 0.11 -0.35 4.50 86.26 0.39 0.03 16 23 C -0.21 0.42 9.43 23.65 0.22 0.64 16 24 C -0.01 0.03 12.03 66.89 0.80 0.83 16 25 O -0.17 -0.53 10.52 4.55 0.05 -0.48 16 26 C -0.21 -0.96 9.04 22.37 0.20 -0.75 16 27 C -0.07 -0.17 8.66 22.25 0.19 0.02 16 28 H 0.40 -2.34 8.70 -74.06 -0.64 -2.99 16 29 H 0.10 0.36 7.96 -2.38 -0.02 0.34 16 30 H -0.29 -1.53 7.11 99.48 0.71 -0.82 16 31 H -0.30 -2.06 7.11 99.48 0.71 -1.35 16 32 H 0.14 0.50 8.06 -2.91 -0.02 0.48 16 33 H 0.13 0.91 8.06 -2.91 -0.02 0.89 16 34 H 0.11 0.05 7.65 -2.39 -0.02 0.03 16 35 H 0.10 0.81 6.15 -2.39 -0.01 0.79 16 36 H 0.07 0.28 8.14 -2.39 -0.02 0.26 16 37 H 0.06 0.44 8.08 -2.39 -0.02 0.42 16 38 H 0.08 0.02 8.14 -2.39 -0.02 0.00 16 39 H 0.10 -0.05 7.19 -2.39 -0.02 -0.07 16 40 H 0.11 -0.94 8.01 -2.39 -0.02 -0.96 16 41 H 0.07 -0.29 8.12 -2.39 -0.02 -0.31 16 42 H 0.08 -0.76 8.14 -2.39 -0.02 -0.78 16 43 H 0.40 -4.11 9.12 -74.06 -0.68 -4.78 16 44 H 0.07 -0.25 8.12 -2.39 -0.02 -0.27 16 45 H 0.12 -1.34 8.14 -2.38 -0.02 -1.36 16 46 H 0.09 -0.53 6.64 -2.38 -0.02 -0.55 16 47 H 0.09 -0.49 6.92 -2.39 -0.02 -0.51 16 48 H 0.19 -1.60 4.91 -2.91 -0.01 -1.61 16 49 H 0.26 -3.53 8.06 -2.91 -0.02 -3.55 16 50 H 0.15 0.06 6.30 -2.91 -0.02 0.04 16 51 H 0.15 -0.47 4.90 -2.91 -0.01 -0.48 16 Total: 0.00 -27.77 411.39 -0.75 -28.52 By element: Atomic # 1 Polarization: -16.85 SS G_CDS: -0.28 Total: -17.13 kcal Atomic # 6 Polarization: 5.74 SS G_CDS: 4.91 Total: 10.65 kcal Atomic # 7 Polarization: -2.91 SS G_CDS: -2.72 Total: -5.63 kcal Atomic # 8 Polarization: -13.67 SS G_CDS: -4.71 Total: -18.38 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: 2.04 Total: 1.96 kcal Total: -27.77 -0.75 -28.52 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_4549634.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.245 kcal (2) G-P(sol) polarization free energy of solvation -27.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -56.016 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.525 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.770 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.69 seconds