Wall clock time and date at job start Sun Mar 7 2021 11:22:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35991 * 117.00364 * 2 1 4 4 C 1.39154 * 120.07345 * 180.02562 * 3 2 1 5 5 O 1.35987 * 120.07525 * 359.97438 * 4 3 2 6 6 C 1.42904 * 117.00217 * 180.02562 * 5 4 3 7 7 C 1.50700 * 109.47145 * 180.02562 * 6 5 4 8 8 O 1.21284 * 120.00164 * 359.97438 * 7 6 5 9 9 N 1.34771 * 119.99795 * 180.02562 * 7 6 5 10 10 C 1.47128 * 125.59515 * 0.02562 * 9 7 6 11 11 C 1.54582 * 107.35995 * 180.94382 * 10 9 7 12 12 C 1.53737 * 102.75050 * 20.84419 * 11 10 9 13 13 C 1.52318 * 116.26346 * 197.35040 * 12 11 10 14 14 C 1.54062 * 86.60986 * 216.60351 * 13 12 11 15 15 O 1.42892 * 113.56527 * 269.69718 * 14 13 12 16 16 C 1.52316 * 116.25938 * 95.00766 * 12 11 10 17 17 C 1.47710 * 125.59039 * 179.71777 * 9 7 6 18 18 C 1.38562 * 119.85273 * 179.97438 * 4 3 2 19 19 C 1.38253 * 120.00018 * 359.97438 * 18 4 3 20 20 N 1.48001 * 119.92605 * 179.97438 * 19 18 4 21 21 O 1.21798 * 120.00291 * 359.97438 * 20 19 18 22 22 O 1.21799 * 119.99871 * 179.97438 * 20 19 18 23 23 C 1.38254 * 120.14464 * 359.97438 * 19 18 4 24 24 C 1.50700 * 119.92591 * 179.97438 * 23 19 18 25 25 O 1.42892 * 109.47095 * 74.99893 * 24 23 19 26 26 Si 1.86302 * 109.47104 * 195.00084 * 24 23 19 27 27 C 1.38244 * 120.14707 * 359.74633 * 23 19 18 28 28 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46938 * 59.99845 * 1 2 3 30 30 H 1.09004 * 109.46926 * 299.99967 * 1 2 3 31 31 H 1.08996 * 109.47217 * 300.00125 * 6 5 4 32 32 H 1.09004 * 109.46575 * 60.00471 * 6 5 4 33 33 H 1.08999 * 109.86728 * 300.38918 * 10 9 7 34 34 H 1.08999 * 109.86751 * 61.49713 * 10 9 7 35 35 H 1.08997 * 110.75498 * 139.16495 * 11 10 9 36 36 H 1.09005 * 110.75455 * 262.34291 * 11 10 9 37 37 H 1.09004 * 113.68377 * 331.02749 * 13 12 11 38 38 H 1.08995 * 113.69486 * 102.17841 * 13 12 11 39 39 H 1.09003 * 113.63216 * 138.95585 * 14 13 12 40 40 H 0.96704 * 114.00098 * 277.79581 * 15 14 13 41 41 H 1.08999 * 113.68603 * 257.82573 * 16 12 11 42 42 H 1.08997 * 113.68753 * 28.87102 * 16 12 11 43 43 H 1.09002 * 110.39661 * 276.23199 * 17 9 7 44 44 H 1.08998 * 110.39592 * 38.63504 * 17 9 7 45 45 H 1.07999 * 120.00336 * 179.97438 * 18 4 3 46 46 H 1.09000 * 109.47125 * 315.00000 * 24 23 19 47 47 H 0.96705 * 114.00348 * 59.99895 * 25 24 23 48 48 H 1.48504 * 109.99830 * 58.68039 * 26 24 23 49 49 H 1.48496 * 109.99569 * 179.97438 * 26 24 23 50 50 H 1.08001 * 120.00049 * 180.27280 * 27 23 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4360 1.2862 -0.0005 5 8 4.1796 0.1476 -0.0005 6 6 5.6004 0.3005 -0.0005 7 6 6.2519 -1.0584 -0.0012 8 8 5.5670 -2.0593 -0.0011 9 7 7.5957 -1.1614 -0.0008 10 6 8.5410 -0.0340 0.0008 11 6 9.9678 -0.6284 -0.0236 12 6 9.7354 -2.0461 -0.5709 13 6 10.8609 -3.0478 -0.3472 14 6 10.5133 -3.6106 -1.7386 15 8 9.5398 -4.6560 -1.7051 16 6 9.9212 -2.2279 -2.0717 17 6 8.3610 -2.4248 0.0046 18 6 4.0604 2.5231 -0.0011 19 6 3.3031 3.6798 -0.0016 20 7 3.9717 5.0001 -0.0016 21 8 5.1878 5.0670 -0.0007 22 8 3.3057 6.0200 -0.0025 23 6 1.9225 3.6057 -0.0021 24 6 1.1018 4.8696 -0.0021 25 8 1.1353 5.4593 -1.3033 26 14 -0.6595 4.4663 0.4517 27 6 1.2933 2.3747 -0.0074 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 0.5139 0.8900 31 1 5.9067 0.8503 -0.8905 32 1 5.9066 0.8502 0.8895 33 1 8.3819 0.5840 -0.8828 34 1 8.4038 0.5632 0.9023 35 1 10.6127 -0.0573 -0.6913 36 1 10.3889 -0.6633 0.9812 37 1 11.8492 -2.5912 -0.2938 38 1 10.6702 -3.7461 0.4677 39 1 11.3875 -3.8661 -2.3374 40 1 9.9048 -5.5269 -1.4965 41 1 8.9840 -2.2750 -2.6264 42 1 10.6399 -1.5362 -2.5110 43 1 8.4630 -2.8028 1.0219 44 1 7.8752 -3.1659 -0.6301 45 1 5.1387 2.5838 -0.0011 46 1 1.5131 5.5699 0.7249 47 1 0.7837 4.8907 -2.0020 48 1 -0.7048 3.8233 1.7896 49 1 -1.4791 5.7046 0.4559 50 1 0.2147 2.3196 -0.0123 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_4549636.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:22:43 Heat of formation + Delta-G solvation = -105.780920 kcal Electronic energy + Delta-G solvation = -38148.678470 eV Core-core repulsion = 32921.072263 eV Total energy + Delta-G solvation = -5227.606207 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 395.160 amu Computer time = 1.62 seconds Orbital eigenvalues (eV) -43.42250 -42.20199 -41.82298 -40.59544 -39.55502 -39.19995 -37.78958 -37.62299 -37.13649 -35.38622 -32.70964 -32.62511 -31.56195 -30.47930 -28.92335 -28.25316 -27.90564 -26.85644 -25.83815 -24.77321 -23.73323 -23.19679 -22.61548 -20.81413 -20.79481 -19.88080 -19.76296 -19.52826 -18.80721 -18.69404 -18.32327 -18.03006 -17.93207 -17.61586 -17.32683 -17.14901 -16.68058 -16.45842 -16.32331 -16.11209 -16.02259 -15.54626 -15.42314 -15.25117 -14.89831 -14.54178 -14.41501 -14.25261 -13.98515 -13.91933 -13.80123 -13.60547 -13.46190 -13.09130 -13.02269 -12.79568 -12.68584 -12.54119 -12.49358 -12.45622 -12.36418 -12.28344 -12.21988 -11.80044 -11.79363 -11.50735 -11.25130 -11.12526 -10.59617 -10.54433 -10.48147 -9.85242 -9.52789 -5.13776 -1.38169 -0.46418 0.14479 0.28371 1.10381 1.12897 1.28427 1.57118 1.86986 1.87413 1.93282 2.14947 2.95576 3.03836 3.14464 3.21330 3.26908 3.38200 3.43358 3.45618 3.54568 3.61566 3.76612 3.78903 3.84792 3.89833 3.95402 4.02463 4.08801 4.19243 4.20886 4.31202 4.37432 4.39730 4.45797 4.53290 4.57316 4.67621 4.70713 4.77011 4.79963 4.80717 4.86644 4.91532 5.00268 5.07864 5.19845 5.23992 5.27611 5.30142 5.55014 6.03544 6.25087 6.45944 6.71106 6.85440 6.87346 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.005 4.005 2 O -0.309 6.309 3 C 0.171 3.829 4 C 0.097 3.903 5 O -0.292 6.292 6 C 0.038 3.962 7 C 0.525 3.475 8 O -0.571 6.571 9 N -0.613 5.613 10 C 0.083 3.917 11 C -0.113 4.113 12 C -0.088 4.088 13 C -0.144 4.144 14 C 0.070 3.930 15 O -0.576 6.576 16 C -0.121 4.121 17 C 0.132 3.868 18 C -0.110 4.110 19 C -0.045 4.045 20 N 0.036 4.964 21 O -0.186 6.186 22 O -0.163 6.163 23 C -0.039 4.039 24 C -0.091 4.091 25 O -0.536 6.536 26 Si 0.787 3.213 27 C -0.162 4.162 28 H 0.120 0.880 29 H 0.094 0.906 30 H 0.081 0.919 31 H 0.125 0.875 32 H 0.125 0.875 33 H 0.090 0.910 34 H 0.092 0.908 35 H 0.108 0.892 36 H 0.091 0.909 37 H 0.118 0.882 38 H 0.074 0.926 39 H 0.085 0.915 40 H 0.396 0.604 41 H 0.051 0.949 42 H 0.122 0.878 43 H 0.067 0.933 44 H 0.059 0.941 45 H 0.181 0.819 46 H 0.115 0.885 47 H 0.393 0.607 48 H -0.272 1.272 49 H -0.290 1.290 50 H 0.195 0.805 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.200 -3.046 -1.191 3.942 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.098 4.098 2 O -0.220 6.220 3 C 0.123 3.877 4 C 0.050 3.950 5 O -0.205 6.205 6 C -0.039 4.039 7 C 0.313 3.687 8 O -0.450 6.450 9 N -0.347 5.347 10 C -0.038 4.038 11 C -0.150 4.150 12 C -0.089 4.089 13 C -0.181 4.181 14 C 0.011 3.989 15 O -0.385 6.385 16 C -0.158 4.158 17 C 0.010 3.990 18 C -0.129 4.129 19 C -0.130 4.130 20 N 0.549 4.451 21 O -0.397 6.397 22 O -0.377 6.377 23 C -0.041 4.041 24 C -0.199 4.199 25 O -0.343 6.343 26 Si 0.689 3.311 27 C -0.180 4.180 28 H 0.139 0.861 29 H 0.113 0.887 30 H 0.099 0.901 31 H 0.143 0.857 32 H 0.143 0.857 33 H 0.108 0.892 34 H 0.110 0.890 35 H 0.127 0.873 36 H 0.110 0.890 37 H 0.136 0.864 38 H 0.092 0.908 39 H 0.102 0.898 40 H 0.246 0.754 41 H 0.070 0.930 42 H 0.141 0.859 43 H 0.085 0.915 44 H 0.077 0.923 45 H 0.198 0.802 46 H 0.133 0.867 47 H 0.242 0.758 48 H -0.198 1.198 49 H -0.217 1.217 50 H 0.212 0.788 Dipole moment (debyes) X Y Z Total from point charges 0.699 -3.489 -0.452 3.587 hybrid contribution 1.180 0.232 0.439 1.281 sum 1.879 -3.257 -0.013 3.761 Atomic orbital electron populations 1.23825 0.74598 1.07082 1.04268 1.86339 1.24961 1.24553 1.86174 1.18679 0.89043 0.86476 0.93547 1.18005 0.88906 0.85042 1.03014 1.86297 1.18263 1.27121 1.88783 1.22787 0.78816 0.95470 1.06841 1.20025 0.81405 0.90657 0.76599 1.90773 1.63127 1.40089 1.51012 1.48540 1.04004 1.10035 1.72168 1.22577 0.88930 0.88386 1.03935 1.22526 0.95036 0.93888 1.03566 1.21849 0.93769 0.96720 0.96579 1.23409 0.98753 0.97892 0.98092 1.22988 0.91259 0.87951 0.96696 1.86463 1.37597 1.20735 1.93656 1.22986 1.01820 0.96027 0.94959 1.21844 0.90741 0.85878 1.00501 1.20873 1.02913 0.88205 1.00944 1.20541 0.92764 0.81910 1.17742 1.43689 1.00834 1.03384 0.97199 1.94501 0.96485 1.94099 1.54584 1.94575 1.64416 1.25317 1.53421 1.20246 0.91024 0.97716 0.95110 1.25776 1.10607 0.92679 0.90848 1.86667 1.87120 1.44553 1.15912 0.94377 0.71740 0.82156 0.82812 1.21093 1.01792 0.88000 1.07117 0.86135 0.88725 0.90077 0.85748 0.85718 0.89187 0.88990 0.87336 0.89039 0.86412 0.90761 0.89766 0.75382 0.92979 0.85944 0.91452 0.92260 0.80201 0.86737 0.75779 1.19794 1.21692 0.78810 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.04 9.81 113.37 1.11 1.15 16 2 O -0.31 -0.36 10.28 -79.59 -0.82 -1.18 16 3 C 0.17 0.05 6.70 22.57 0.15 0.20 16 4 C 0.10 0.24 6.70 22.57 0.15 0.40 16 5 O -0.29 -1.87 9.45 -66.99 -0.63 -2.50 16 6 C 0.04 0.00 4.41 71.24 0.31 0.31 16 7 C 0.53 3.88 7.93 87.66 0.69 4.58 16 8 O -0.57 -10.65 16.78 15.99 0.27 -10.38 16 9 N -0.61 -1.15 3.34 -812.59 -2.71 -3.86 16 10 C 0.08 -0.57 6.50 86.80 0.56 -0.01 16 11 C -0.11 0.98 6.34 31.38 0.20 1.18 16 12 C -0.09 0.34 0.92 -52.16 -0.05 0.30 16 13 C -0.14 0.89 7.28 30.73 0.22 1.12 16 14 C 0.07 -0.24 5.27 31.28 0.16 -0.08 16 15 O -0.58 -0.68 12.50 -148.98 -1.86 -2.54 16 16 C -0.12 0.37 7.23 30.72 0.22 0.60 16 17 C 0.13 0.43 5.97 86.40 0.52 0.95 16 18 C -0.11 -0.10 8.54 22.35 0.19 0.09 16 19 C -0.05 -0.19 6.85 36.39 0.25 0.06 16 20 N 0.04 0.35 4.45 -46.46 -0.21 0.15 16 21 O -0.19 -2.04 18.44 18.89 0.35 -1.69 16 22 O -0.16 -2.12 14.62 25.11 0.37 -1.76 16 23 C -0.04 0.00 5.26 -19.86 -0.10 -0.11 16 24 C -0.09 -0.03 1.74 71.24 0.12 0.09 16 25 O -0.54 -0.72 11.79 -129.61 -1.53 -2.25 16 26 Si 0.79 -3.97 29.91 68.60 2.05 -1.92 16 27 C -0.16 0.72 7.64 22.35 0.17 0.89 16 28 H 0.12 -1.25 8.14 -2.39 -0.02 -1.27 16 29 H 0.09 -1.36 7.65 -2.39 -0.02 -1.38 16 30 H 0.08 -0.99 7.68 -2.38 -0.02 -1.01 16 31 H 0.12 -0.73 7.66 -2.39 -0.02 -0.74 16 32 H 0.13 -0.75 7.66 -2.38 -0.02 -0.76 16 33 H 0.09 -0.87 8.14 -2.39 -0.02 -0.89 16 34 H 0.09 -0.92 8.14 -2.39 -0.02 -0.94 16 35 H 0.11 -1.32 7.99 -2.39 -0.02 -1.34 16 36 H 0.09 -0.89 8.14 -2.38 -0.02 -0.91 16 37 H 0.12 -1.19 8.14 -2.38 -0.02 -1.21 16 38 H 0.07 -0.36 8.12 -2.39 -0.02 -0.38 16 39 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 40 H 0.40 -2.67 9.12 -74.05 -0.68 -3.34 16 41 H 0.05 0.14 8.13 -2.39 -0.02 0.12 16 42 H 0.12 -0.97 8.05 -2.39 -0.02 -0.99 16 43 H 0.07 0.24 8.14 -2.39 -0.02 0.22 16 44 H 0.06 0.61 7.15 -2.39 -0.02 0.59 16 45 H 0.18 -0.59 5.85 -2.91 -0.02 -0.61 16 46 H 0.12 0.58 6.07 -2.39 -0.01 0.57 16 47 H 0.39 -3.38 8.70 -74.05 -0.64 -4.02 16 48 H -0.27 0.44 7.11 99.48 0.71 1.15 16 49 H -0.29 -0.85 7.11 99.48 0.71 -0.14 16 50 H 0.20 -2.33 3.37 -2.91 -0.01 -2.34 16 Total: 0.00 -36.32 411.07 -0.08 -36.40 By element: Atomic # 1 Polarization: -19.94 SS G_CDS: -0.25 Total: -20.19 kcal Atomic # 6 Polarization: 6.82 SS G_CDS: 4.90 Total: 11.72 kcal Atomic # 7 Polarization: -0.80 SS G_CDS: -2.92 Total: -3.71 kcal Atomic # 8 Polarization: -18.44 SS G_CDS: -3.86 Total: -22.30 kcal Atomic # 14 Polarization: -3.97 SS G_CDS: 2.05 Total: -1.92 kcal Total: -36.32 -0.08 -36.40 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_4549636.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.380 kcal (2) G-P(sol) polarization free energy of solvation -36.322 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.702 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.079 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.401 kcal (6) G-S(sol) free energy of system = (1) + (5) -105.781 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.63 seconds