Wall clock time and date at job start Sun Mar 7 2021 11:22:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47427 * 2 1 4 4 C 1.50706 * 109.46998 * 240.00022 * 2 1 3 5 5 C 1.38243 * 119.94514 * 119.99895 * 4 2 1 6 6 C 1.38167 * 120.05719 * 180.02562 * 5 4 2 7 7 C 1.38711 * 119.94219 * 359.97438 * 6 5 4 8 8 O 1.35897 * 120.05162 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00357 * 0.02562 * 8 7 6 10 10 C 1.50702 * 109.47165 * 179.97438 * 9 8 7 11 11 O 1.21280 * 120.00308 * 0.02562 * 10 9 8 12 12 N 1.34782 * 119.99860 * 179.97438 * 10 9 8 13 13 C 1.47124 * 125.58959 * 0.03392 * 12 10 9 14 14 C 1.54587 * 107.35775 * 179.04209 * 13 12 10 15 15 C 1.53752 * 102.74851 * 339.14914 * 14 13 12 16 16 C 1.52312 * 116.25568 * 265.00318 * 15 14 13 17 17 C 1.54055 * 86.60848 * 216.59551 * 16 15 14 18 18 O 1.42893 * 113.57038 * 269.69997 * 17 16 15 19 19 C 1.52306 * 116.26274 * 162.65712 * 15 14 13 20 20 C 1.47703 * 125.58931 * 180.02562 * 12 10 9 21 21 C 1.38749 * 119.88900 * 0.25778 * 7 6 5 22 22 N 1.48002 * 120.02480 * 179.72635 * 21 7 6 23 23 O 1.21809 * 119.99945 * 179.97438 * 22 21 7 24 24 O 1.21798 * 120.00220 * 0.02562 * 22 21 7 25 25 C 1.38124 * 119.94384 * 359.51219 * 21 7 6 26 26 H 0.96703 * 113.99689 * 299.99658 * 1 2 3 27 27 H 1.08996 * 109.47339 * 120.00554 * 2 1 3 28 28 H 1.48495 * 110.00232 * 178.68518 * 3 2 1 29 29 H 1.48505 * 109.99958 * 300.00652 * 3 2 1 30 30 H 1.08004 * 119.97041 * 0.02562 * 5 4 2 31 31 H 1.08002 * 120.02879 * 179.97438 * 6 5 4 32 32 H 1.09001 * 109.47280 * 59.99930 * 9 8 7 33 33 H 1.08997 * 109.47057 * 299.99928 * 9 8 7 34 34 H 1.09003 * 109.87123 * 59.60019 * 13 12 10 35 35 H 1.08995 * 109.98496 * 298.54734 * 13 12 10 36 36 H 1.08997 * 110.75839 * 97.46696 * 14 13 12 37 37 H 1.09000 * 110.75423 * 220.84014 * 14 13 12 38 38 H 1.08995 * 113.69070 * 331.02173 * 16 15 14 39 39 H 1.08997 * 113.69065 * 102.16978 * 16 15 14 40 40 H 1.09000 * 113.63531 * 138.95452 * 17 16 15 41 41 H 0.96705 * 114.00014 * 277.79747 * 18 17 16 42 42 H 1.09003 * 113.68778 * 257.82275 * 19 15 14 43 43 H 1.08996 * 113.69027 * 28.87248 * 19 15 14 44 44 H 1.09000 * 110.39902 * 321.38290 * 20 12 10 45 45 H 1.08998 * 110.39589 * 83.67502 * 20 12 10 46 46 H 1.08001 * 119.97039 * 180.23516 * 25 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2305 5 6 2.7260 -0.0375 -2.1398 6 6 3.1874 -0.6864 -3.2690 7 6 2.8529 -2.0144 -3.4896 8 8 3.3051 -2.6547 -4.5997 9 6 4.1211 -1.8993 -5.4973 10 6 4.5256 -2.7680 -6.6604 11 8 4.1515 -3.9204 -6.7156 12 7 5.3023 -2.2640 -7.6399 13 6 5.8235 -0.8894 -7.6975 14 6 6.6784 -0.7737 -8.9802 15 6 7.0200 -2.2396 -9.2937 16 6 8.3563 -2.7473 -8.7679 17 6 8.4538 -3.5653 -10.0697 18 8 7.8861 -4.8726 -9.9670 19 6 7.5068 -2.5308 -10.7072 20 6 5.7698 -3.0012 -8.8313 21 6 2.0512 -2.6862 -2.5779 22 7 1.6876 -4.1014 -2.8134 23 8 0.9841 -4.6908 -2.0125 24 8 2.0925 -4.6769 -3.8075 25 6 1.5965 -2.0344 -1.4482 26 1 -0.3933 0.4417 0.7651 27 1 1.7923 -0.5139 0.8899 28 1 3.5346 1.7702 0.0320 29 1 1.5614 2.4679 -1.2085 30 1 2.9864 0.9964 -1.9673 31 1 3.8078 -0.1601 -3.9792 32 1 5.0132 -1.5544 -4.9744 33 1 3.5593 -1.0400 -5.8632 34 1 6.4410 -0.6903 -6.8216 35 1 4.9976 -0.1792 -7.7374 36 1 6.1005 -0.3298 -9.7908 37 1 7.5843 -0.1981 -8.7900 38 1 9.1162 -1.9707 -8.6807 39 1 8.2697 -3.3604 -7.8709 40 1 9.4516 -3.5711 -10.5084 41 1 8.4754 -5.5271 -9.5677 42 1 6.7454 -2.9720 -11.3504 43 1 8.0226 -1.6918 -11.1742 44 1 6.0261 -4.0271 -8.5670 45 1 5.0062 -2.9896 -9.6091 46 1 0.9756 -2.5580 -0.7364 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_4549638.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:22:48 Heat of formation + Delta-G solvation = -75.533547 kcal Electronic energy + Delta-G solvation = -33236.659806 eV Core-core repulsion = 28484.585035 eV Total energy + Delta-G solvation = -4752.074771 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 365.144 amu Computer time = 1.29 seconds Orbital eigenvalues (eV) -43.40837 -42.09610 -41.64687 -40.39853 -39.37216 -37.69968 -37.66103 -37.39265 -35.41530 -33.68472 -32.49051 -31.62637 -30.56571 -28.42906 -27.94081 -26.89654 -26.54746 -24.91002 -23.97041 -22.80914 -22.61042 -20.77339 -20.56717 -19.89650 -19.86897 -19.26048 -18.77483 -18.57148 -18.38520 -17.92501 -17.77378 -17.65407 -16.91964 -16.57649 -16.46871 -16.09462 -15.95750 -15.72880 -15.31927 -15.14529 -14.78037 -14.58257 -14.30241 -14.18676 -14.07921 -13.91540 -13.74540 -13.60250 -13.16957 -13.04907 -12.85297 -12.79281 -12.74768 -12.48748 -12.36123 -12.35029 -12.24417 -11.97971 -11.80816 -11.65079 -11.19520 -11.15621 -11.01219 -10.60428 -10.43830 -9.88966 -9.85148 -4.89374 -1.44226 -0.39509 0.01801 0.22158 0.99777 1.26987 1.28792 1.68190 1.87137 1.92171 2.04770 2.94442 2.96049 3.10544 3.20206 3.21902 3.34489 3.43549 3.46100 3.50555 3.64258 3.68418 3.74750 3.78687 3.90929 3.95104 4.10572 4.18581 4.20743 4.29880 4.37712 4.43672 4.46897 4.54293 4.66401 4.67643 4.74300 4.79809 4.84742 4.88706 4.93091 4.96305 5.06426 5.08795 5.20057 5.25308 5.29430 5.59269 6.24601 6.34405 6.81344 6.85995 6.87357 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.088 4.088 3 Si 0.780 3.220 4 C -0.116 4.116 5 C -0.025 4.025 6 C -0.190 4.190 7 C 0.191 3.809 8 O -0.289 6.289 9 C 0.034 3.966 10 C 0.519 3.481 11 O -0.569 6.569 12 N -0.612 5.612 13 C 0.084 3.916 14 C -0.112 4.112 15 C -0.088 4.088 16 C -0.148 4.148 17 C 0.068 3.932 18 O -0.577 6.577 19 C -0.116 4.116 20 C 0.131 3.869 21 C -0.100 4.100 22 N 0.034 4.966 23 O -0.183 6.183 24 O -0.180 6.180 25 C 0.003 3.997 26 H 0.408 0.592 27 H 0.099 0.901 28 H -0.270 1.270 29 H -0.282 1.282 30 H 0.164 0.836 31 H 0.201 0.799 32 H 0.140 0.860 33 H 0.138 0.862 34 H 0.095 0.905 35 H 0.095 0.905 36 H 0.089 0.911 37 H 0.112 0.888 38 H 0.118 0.882 39 H 0.057 0.943 40 H 0.085 0.915 41 H 0.394 0.606 42 H 0.064 0.936 43 H 0.128 0.872 44 H 0.057 0.943 45 H 0.060 0.940 46 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.929 16.515 2.670 18.513 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.196 4.196 3 Si 0.682 3.318 4 C -0.117 4.117 5 C -0.043 4.043 6 C -0.208 4.208 7 C 0.141 3.859 8 O -0.199 6.199 9 C -0.042 4.042 10 C 0.307 3.693 11 O -0.447 6.447 12 N -0.348 5.348 13 C -0.037 4.037 14 C -0.150 4.150 15 C -0.088 4.088 16 C -0.186 4.186 17 C 0.009 3.991 18 O -0.385 6.385 19 C -0.153 4.153 20 C 0.009 3.991 21 C -0.185 4.185 22 N 0.546 4.454 23 O -0.395 6.395 24 O -0.391 6.391 25 C -0.016 4.016 26 H 0.260 0.740 27 H 0.117 0.883 28 H -0.196 1.196 29 H -0.209 1.209 30 H 0.181 0.819 31 H 0.217 0.783 32 H 0.157 0.843 33 H 0.156 0.844 34 H 0.113 0.887 35 H 0.113 0.887 36 H 0.108 0.892 37 H 0.130 0.870 38 H 0.136 0.864 39 H 0.075 0.925 40 H 0.103 0.897 41 H 0.244 0.756 42 H 0.083 0.917 43 H 0.146 0.854 44 H 0.076 0.924 45 H 0.078 0.922 46 H 0.181 0.819 Dipole moment (debyes) X Y Z Total from point charges 7.877 16.876 1.486 18.683 hybrid contribution 0.010 -2.126 -0.131 2.130 sum 7.887 14.751 1.355 16.782 Atomic orbital electron populations 1.86446 1.17083 1.82716 1.51611 1.25033 0.86258 1.12403 0.95920 0.93441 0.78085 0.74200 0.86072 1.19714 1.00710 0.92376 0.98921 1.21490 0.91604 1.00203 0.90960 1.21660 1.06291 0.90919 1.01930 1.18886 0.89996 0.91828 0.85164 1.86471 1.63691 1.39555 1.30194 1.23006 0.97783 0.94200 0.89242 1.20127 0.78500 0.87369 0.83353 1.90839 1.55392 1.20272 1.78184 1.48529 1.49598 1.15024 1.21606 1.22592 0.99196 0.80991 1.00906 1.22538 1.01230 0.94593 0.96624 1.21789 0.93376 0.96030 0.97650 1.23466 0.96704 1.00663 0.97733 1.23032 0.96988 0.82672 0.96433 1.86451 1.46812 1.20169 1.85033 1.22912 0.99029 0.98474 0.94892 1.21768 0.95142 0.96036 0.86159 1.20879 1.12773 0.82040 1.02825 1.43800 0.98361 1.03686 0.99583 1.94487 1.35036 1.67974 1.41983 1.94702 1.56912 1.69086 1.18441 1.20911 0.93569 0.94459 0.92621 0.74033 0.88284 1.19561 1.20850 0.81871 0.78258 0.84266 0.84449 0.88669 0.88710 0.89233 0.86982 0.86355 0.92450 0.89693 0.75572 0.91709 0.85439 0.92438 0.92198 0.81917 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.28 12.74 -148.98 -1.90 0.38 16 2 C -0.09 0.52 2.81 71.24 0.20 0.72 16 3 Si 0.78 -7.69 29.78 68.60 2.04 -5.64 16 4 C -0.12 0.04 5.42 -19.85 -0.11 -0.07 16 5 C -0.03 0.10 8.66 22.25 0.19 0.29 16 6 C -0.19 0.78 9.04 22.37 0.20 0.98 16 7 C 0.19 1.09 6.67 22.51 0.15 1.24 16 8 O -0.29 -2.81 7.68 -63.37 -0.49 -3.30 16 9 C 0.03 -0.04 4.41 71.24 0.31 0.28 16 10 C 0.52 4.20 7.93 87.66 0.69 4.90 16 11 O -0.57 -12.36 16.78 16.01 0.27 -12.09 16 12 N -0.61 -0.92 3.34 -813.03 -2.71 -3.63 16 13 C 0.08 -0.78 6.50 86.80 0.56 -0.21 16 14 C -0.11 1.13 6.35 31.39 0.20 1.33 16 15 C -0.09 0.35 0.93 -52.24 -0.05 0.30 16 16 C -0.15 0.72 7.21 30.72 0.22 0.95 16 17 C 0.07 -0.20 5.27 31.28 0.16 -0.03 16 18 O -0.58 -1.48 12.48 -148.98 -1.86 -3.34 16 19 C -0.12 0.49 7.28 30.72 0.22 0.71 16 20 C 0.13 0.56 5.95 86.32 0.51 1.08 16 21 C -0.10 -1.08 6.87 36.47 0.25 -0.83 16 22 N 0.03 0.65 4.45 -46.25 -0.21 0.45 16 23 O -0.18 -3.61 18.45 18.87 0.35 -3.26 16 24 O -0.18 -4.46 17.24 25.61 0.44 -4.02 16 25 C 0.00 0.02 9.12 22.25 0.20 0.22 16 26 H 0.41 -5.84 8.74 -74.06 -0.65 -6.49 16 27 H 0.10 -0.93 7.96 -2.39 -0.02 -0.95 16 28 H -0.27 1.79 7.11 99.48 0.71 2.50 16 29 H -0.28 1.11 7.11 99.48 0.71 1.82 16 30 H 0.16 -1.41 4.87 -2.91 -0.01 -1.43 16 31 H 0.20 -2.76 6.30 -2.91 -0.02 -2.78 16 32 H 0.14 -1.34 7.66 -2.39 -0.02 -1.36 16 33 H 0.14 -1.26 7.66 -2.39 -0.02 -1.27 16 34 H 0.10 -1.29 8.14 -2.39 -0.02 -1.31 16 35 H 0.09 -1.25 8.14 -2.39 -0.02 -1.27 16 36 H 0.09 -0.95 8.14 -2.39 -0.02 -0.97 16 37 H 0.11 -1.60 7.99 -2.39 -0.02 -1.62 16 38 H 0.12 -1.15 8.05 -2.39 -0.02 -1.17 16 39 H 0.06 -0.04 8.12 -2.39 -0.02 -0.06 16 40 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 41 H 0.39 -1.71 9.12 -74.05 -0.68 -2.38 16 42 H 0.06 -0.01 8.12 -2.39 -0.02 -0.03 16 43 H 0.13 -1.20 8.14 -2.39 -0.02 -1.22 16 44 H 0.06 0.65 7.14 -2.39 -0.02 0.63 16 45 H 0.06 0.37 8.14 -2.39 -0.02 0.35 16 46 H 0.16 0.81 7.61 -2.91 -0.02 0.79 16 Total: 0.00 -41.00 385.79 -0.36 -41.35 By element: Atomic # 1 Polarization: -18.52 SS G_CDS: -0.23 Total: -18.75 kcal Atomic # 6 Polarization: 7.92 SS G_CDS: 3.94 Total: 11.86 kcal Atomic # 7 Polarization: -0.27 SS G_CDS: -2.92 Total: -3.19 kcal Atomic # 8 Polarization: -22.45 SS G_CDS: -3.19 Total: -25.63 kcal Atomic # 14 Polarization: -7.69 SS G_CDS: 2.04 Total: -5.64 kcal Total: -41.00 -0.36 -41.35 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_4549638.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.180 kcal (2) G-P(sol) polarization free energy of solvation -40.998 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.178 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.355 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.534 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.30 seconds