Wall clock time and date at job start Sun Mar 7 2021 11:23:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.35996 * 117.00236 * 2 1 4 4 C 1.39154 * 120.07807 * 179.97438 * 3 2 1 5 5 O 1.35992 * 120.07051 * 0.02562 * 4 3 2 6 6 C 1.42900 * 117.00153 * 179.97438 * 5 4 3 7 7 C 1.50696 * 109.47587 * 180.02562 * 6 5 4 8 8 O 1.21293 * 119.99728 * 359.97438 * 7 6 5 9 9 N 1.34768 * 120.00202 * 180.02562 * 7 6 5 10 10 C 1.47129 * 125.59433 * 0.02562 * 9 7 6 11 11 C 1.54582 * 107.36282 * 180.93882 * 10 9 7 12 12 C 1.53751 * 102.74928 * 20.84653 * 11 10 9 13 13 C 1.52307 * 116.26368 * 197.34738 * 12 11 10 14 14 C 1.54054 * 86.60918 * 216.60229 * 13 12 11 15 15 O 1.42903 * 113.56980 * 269.70006 * 14 13 12 16 16 C 1.52308 * 116.25764 * 95.00145 * 12 11 10 17 17 C 1.47711 * 125.59228 * 179.72014 * 9 7 6 18 18 C 1.38563 * 119.85258 * 180.02562 * 4 3 2 19 19 C 1.38236 * 120.00420 * 0.02562 * 18 4 3 20 20 C 1.38261 * 120.14487 * 0.02562 * 19 18 4 21 21 C 1.50699 * 119.92587 * 179.97438 * 20 19 18 22 22 O 1.42892 * 109.47249 * 120.00208 * 21 20 19 23 23 Si 1.86298 * 109.47032 * 359.97438 * 21 20 19 24 24 C 1.38237 * 120.14345 * 0.23650 * 20 19 18 25 25 H 1.09004 * 109.46955 * 60.00281 * 1 2 3 26 26 H 1.09004 * 109.47126 * 179.97438 * 1 2 3 27 27 H 1.08989 * 109.47415 * 299.99766 * 1 2 3 28 28 H 1.09000 * 109.46928 * 300.00722 * 6 5 4 29 29 H 1.08998 * 109.46806 * 60.00203 * 6 5 4 30 30 H 1.08997 * 109.86964 * 300.38586 * 10 9 7 31 31 H 1.08997 * 109.86287 * 61.49551 * 10 9 7 32 32 H 1.09002 * 110.75692 * 139.15921 * 11 10 9 33 33 H 1.09001 * 110.75582 * 262.34689 * 11 10 9 34 34 H 1.09001 * 113.69161 * 331.02631 * 13 12 11 35 35 H 1.09002 * 113.69291 * 102.18032 * 13 12 11 36 36 H 1.09005 * 113.63758 * 138.95530 * 14 13 12 37 37 H 0.96705 * 113.99626 * 277.79919 * 15 14 13 38 38 H 1.09002 * 113.69410 * 257.83005 * 16 12 11 39 39 H 1.09001 * 113.69049 * 28.88061 * 16 12 11 40 40 H 1.08999 * 110.39590 * 276.22964 * 17 9 7 41 41 H 1.09000 * 110.39754 * 38.63000 * 17 9 7 42 42 H 1.08000 * 119.99665 * 179.97438 * 18 4 3 43 43 H 1.07997 * 119.93023 * 180.02562 * 19 18 4 44 44 H 1.09004 * 109.46453 * 240.00276 * 21 20 19 45 45 H 0.96703 * 114.00176 * 299.99748 * 22 21 20 46 46 H 1.48506 * 109.99834 * 58.68765 * 23 21 20 47 47 H 1.48502 * 110.00011 * 180.02562 * 23 21 20 48 48 H 1.08001 * 119.99652 * 179.74952 * 24 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2864 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6003 0.3007 0.0005 7 6 6.2519 -1.0581 -0.0001 8 8 5.5670 -2.0591 0.0000 9 7 7.5957 -1.1610 0.0003 10 6 8.5409 -0.0336 0.0019 11 6 9.9678 -0.6278 -0.0224 12 6 9.7356 -2.0457 -0.5697 13 6 10.8610 -3.0472 -0.3460 14 6 10.5135 -3.6100 -1.7373 15 8 9.5400 -4.6555 -1.7039 16 6 9.9213 -2.2274 -2.0705 17 6 8.3611 -2.4244 0.0057 18 6 4.0602 2.5234 0.0011 19 6 3.3029 3.6799 0.0016 20 6 1.9223 3.6057 0.0021 21 6 1.1015 4.8696 0.0033 22 8 0.2766 4.9030 -1.1630 23 14 2.2364 6.3470 0.0046 24 6 1.2932 2.3748 0.0071 25 1 -0.3633 0.5138 -0.8900 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3634 0.5137 0.8899 28 1 5.9065 0.8506 -0.8894 29 1 5.9065 0.8504 0.8905 30 1 8.3819 0.5844 -0.8818 31 1 8.4036 0.5636 0.9034 32 1 10.6128 -0.0567 -0.6902 33 1 10.3888 -0.6627 0.9824 34 1 11.8494 -2.5907 -0.2926 35 1 10.6703 -3.7455 0.4690 36 1 11.3877 -3.8654 -2.3362 37 1 9.9051 -5.5264 -1.4953 38 1 8.9842 -2.2745 -2.6253 39 1 10.6401 -1.5357 -2.5098 40 1 8.4631 -2.8024 1.0229 41 1 7.8754 -3.1655 -0.6290 42 1 5.1385 2.5841 0.0019 43 1 3.7907 4.6434 0.0016 44 1 0.4731 4.8938 0.8937 45 1 0.7701 4.8840 -1.9944 46 1 3.1209 6.3090 -1.1878 47 1 1.4391 7.5999 0.0063 48 1 0.2146 2.3197 0.0116 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_60476.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:23:17 Heat of formation + Delta-G solvation = -111.012647 kcal Electronic energy + Delta-G solvation = -31163.623304 eV Core-core repulsion = 26766.806669 eV Total energy + Delta-G solvation = -4396.816636 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.12 seconds Orbital eigenvalues (eV) -41.98497 -41.62814 -40.29194 -39.12430 -38.86553 -37.57749 -36.96049 -35.36355 -32.11820 -31.59253 -31.36142 -30.25187 -28.53083 -28.09823 -27.00291 -26.17237 -24.77039 -23.36795 -22.75301 -22.46652 -20.53865 -19.90705 -19.76304 -18.50820 -18.41639 -18.04726 -17.77483 -17.56865 -17.15135 -16.93349 -16.53542 -16.26265 -16.13130 -15.98922 -15.80783 -15.72777 -15.66023 -15.14660 -14.95313 -14.45234 -14.31311 -14.15624 -13.97052 -13.74548 -13.58029 -13.52343 -13.41810 -13.08385 -12.96758 -12.61329 -12.56618 -12.51981 -12.14879 -12.13183 -11.97461 -11.87538 -11.66698 -11.64633 -11.33837 -10.83363 -10.69056 -10.62422 -9.75666 -9.69657 -8.82584 -4.97718 0.20015 0.32242 1.26915 1.40736 1.58324 1.58823 1.94811 2.34946 2.45299 2.59174 2.95429 3.15264 3.26454 3.34340 3.36499 3.54350 3.63777 3.66450 3.77629 3.79340 3.82492 3.90641 3.97062 4.04398 4.14829 4.16153 4.26992 4.28583 4.31947 4.37021 4.46602 4.53472 4.54341 4.59591 4.65648 4.67980 4.71227 4.71891 4.78201 4.90358 4.98351 5.02475 5.10464 5.12622 5.15426 5.20818 5.38711 5.58312 6.01307 6.38908 6.39716 6.58009 6.62863 7.14098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.106 3.894 5 O -0.277 6.277 6 C 0.045 3.955 7 C 0.531 3.469 8 O -0.508 6.508 9 N -0.619 5.619 10 C 0.095 3.905 11 C -0.119 4.119 12 C -0.090 4.090 13 C -0.154 4.154 14 C 0.079 3.921 15 O -0.549 6.549 16 C -0.119 4.119 17 C 0.136 3.864 18 C -0.170 4.170 19 C -0.113 4.113 20 C -0.114 4.114 21 C -0.072 4.072 22 O -0.530 6.530 23 Si 0.686 3.314 24 C -0.146 4.146 25 H 0.056 0.944 26 H 0.103 0.897 27 H 0.056 0.944 28 H 0.092 0.908 29 H 0.094 0.906 30 H 0.071 0.929 31 H 0.072 0.928 32 H 0.086 0.914 33 H 0.083 0.917 34 H 0.096 0.904 35 H 0.079 0.921 36 H 0.070 0.930 37 H 0.383 0.617 38 H 0.079 0.921 39 H 0.099 0.901 40 H 0.071 0.929 41 H 0.093 0.907 42 H 0.139 0.861 43 H 0.133 0.867 44 H 0.118 0.882 45 H 0.376 0.624 46 H -0.259 1.259 47 H -0.257 1.257 48 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.537 3.221 1.397 8.315 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.060 3.940 5 O -0.190 6.190 6 C -0.034 4.034 7 C 0.318 3.682 8 O -0.381 6.381 9 N -0.356 5.356 10 C -0.028 4.028 11 C -0.157 4.157 12 C -0.091 4.091 13 C -0.192 4.192 14 C 0.019 3.981 15 O -0.355 6.355 16 C -0.157 4.157 17 C 0.014 3.986 18 C -0.189 4.189 19 C -0.130 4.130 20 C -0.115 4.115 21 C -0.182 4.182 22 O -0.337 6.337 23 Si 0.587 3.413 24 C -0.165 4.165 25 H 0.075 0.925 26 H 0.121 0.879 27 H 0.075 0.925 28 H 0.110 0.890 29 H 0.111 0.889 30 H 0.090 0.910 31 H 0.090 0.910 32 H 0.105 0.895 33 H 0.101 0.899 34 H 0.114 0.886 35 H 0.098 0.902 36 H 0.088 0.912 37 H 0.231 0.769 38 H 0.098 0.902 39 H 0.117 0.883 40 H 0.090 0.910 41 H 0.111 0.889 42 H 0.156 0.844 43 H 0.150 0.850 44 H 0.136 0.864 45 H 0.224 0.776 46 H -0.184 1.184 47 H -0.183 1.183 48 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 6.430 3.514 1.276 7.438 hybrid contribution 0.084 -0.441 -0.888 0.995 sum 6.514 3.072 0.388 7.213 Atomic orbital electron populations 1.23129 0.78132 1.04404 1.01347 1.86255 1.21321 1.25326 1.88526 1.18288 0.89009 0.85582 1.01043 1.18294 0.88326 0.85782 1.01635 1.86275 1.16129 1.27778 1.88770 1.22433 0.81016 0.96153 1.03756 1.19611 0.80729 0.90567 0.77320 1.90810 1.61590 1.38168 1.47564 1.48420 1.04238 1.08692 1.74262 1.22193 0.89270 0.89332 1.01997 1.22483 0.95311 0.95287 1.02629 1.21906 0.95265 0.95243 0.96707 1.23423 0.98267 0.98515 0.99016 1.22809 0.91214 0.88386 0.95684 1.86499 1.36081 1.19432 1.93448 1.22904 1.02524 0.95072 0.95151 1.21862 0.89198 0.86275 1.01250 1.20981 1.00440 0.90681 1.06768 1.20675 0.92840 0.97842 1.01690 1.19978 0.93695 0.95085 1.02730 1.25007 1.00214 1.01813 0.91187 1.86591 1.35605 1.95713 1.15755 0.95000 0.80389 0.76364 0.89529 1.20932 1.00389 0.90380 1.04795 0.92543 0.87875 0.92512 0.88995 0.88853 0.91026 0.90954 0.89497 0.89881 0.88560 0.90231 0.91194 0.76903 0.90184 0.88260 0.91033 0.88889 0.84368 0.85016 0.86387 0.77604 1.18429 1.18259 0.84162 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.02 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.51 10.28 -34.23 -0.35 -1.86 16 3 C 0.11 0.42 6.70 -39.12 -0.26 0.16 16 4 C 0.11 0.36 6.70 -39.12 -0.26 0.10 16 5 O -0.28 -1.41 9.45 -47.34 -0.45 -1.86 16 6 C 0.05 0.05 4.41 36.00 0.16 0.21 16 7 C 0.53 2.11 7.93 -10.99 -0.09 2.02 16 8 O -0.51 -4.64 16.78 -14.36 -0.24 -4.88 16 9 N -0.62 -0.67 3.34 -170.77 -0.57 -1.24 16 10 C 0.10 -0.26 6.50 -2.87 -0.02 -0.28 16 11 C -0.12 0.41 6.34 -25.51 -0.16 0.25 16 12 C -0.09 0.15 0.92 -154.49 -0.14 0.01 16 13 C -0.15 0.40 7.28 -26.53 -0.19 0.21 16 14 C 0.08 -0.12 5.27 -25.68 -0.14 -0.26 16 15 O -0.55 -0.07 12.50 -35.23 -0.44 -0.51 16 16 C -0.12 0.16 7.23 -26.54 -0.19 -0.03 16 17 C 0.14 0.17 5.97 -2.99 -0.02 0.15 16 18 C -0.17 -0.05 9.04 -39.46 -0.36 -0.40 16 19 C -0.11 0.03 8.66 -39.57 -0.34 -0.31 16 20 C -0.11 -0.07 5.39 -104.61 -0.56 -0.64 16 21 C -0.07 0.01 2.82 36.01 0.10 0.11 16 22 O -0.53 -0.68 12.77 -35.23 -0.45 -1.13 16 23 Si 0.69 -0.81 29.78 -169.99 -5.06 -5.87 16 24 C -0.15 -0.28 8.60 -39.46 -0.34 -0.62 16 25 H 0.06 -0.01 7.68 -51.93 -0.40 -0.41 16 26 H 0.10 -0.05 8.14 -51.93 -0.42 -0.47 16 27 H 0.06 -0.02 7.65 -51.94 -0.40 -0.42 16 28 H 0.09 -0.15 7.66 -51.93 -0.40 -0.55 16 29 H 0.09 -0.17 7.66 -51.93 -0.40 -0.57 16 30 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 31 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 32 H 0.09 -0.41 7.99 -51.93 -0.42 -0.82 16 33 H 0.08 -0.32 8.14 -51.93 -0.42 -0.74 16 34 H 0.10 -0.37 8.14 -51.93 -0.42 -0.79 16 35 H 0.08 -0.18 8.12 -51.93 -0.42 -0.60 16 36 H 0.07 -0.19 8.14 -51.93 -0.42 -0.61 16 37 H 0.38 -1.45 9.12 45.56 0.42 -1.04 16 38 H 0.08 0.07 8.13 -51.93 -0.42 -0.35 16 39 H 0.10 -0.31 8.05 -51.93 -0.42 -0.73 16 40 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 41 H 0.09 0.37 7.15 -51.93 -0.37 0.00 16 42 H 0.14 -0.38 6.30 -52.49 -0.33 -0.71 16 43 H 0.13 -0.33 4.87 -52.49 -0.26 -0.59 16 44 H 0.12 -0.10 7.96 -51.93 -0.41 -0.52 16 45 H 0.38 -0.54 8.70 45.56 0.40 -0.14 16 46 H -0.26 -0.16 7.11 56.52 0.40 0.24 16 47 H -0.26 -0.57 7.11 56.52 0.40 -0.17 16 48 H 0.14 0.13 6.30 -52.49 -0.33 -0.20 16 LS Contribution 389.02 15.07 5.86 5.86 Total: 0.00 -11.91 389.02 -9.84 -21.75 By element: Atomic # 1 Polarization: -5.64 SS G_CDS: -6.31 Total: -11.95 kcal Atomic # 6 Polarization: 3.50 SS G_CDS: -1.82 Total: 1.68 kcal Atomic # 7 Polarization: -0.67 SS G_CDS: -0.57 Total: -1.24 kcal Atomic # 8 Polarization: -8.30 SS G_CDS: -1.93 Total: -10.23 kcal Atomic # 14 Polarization: -0.81 SS G_CDS: -5.06 Total: -5.87 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -11.91 -9.84 -21.75 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_60476.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -89.260 kcal (2) G-P(sol) polarization free energy of solvation -11.914 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -101.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.839 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.753 kcal (6) G-S(sol) free energy of system = (1) + (5) -111.013 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.12 seconds