Wall clock time and date at job start Sun Mar 7 2021 11:23:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.46834 * 2 1 4 4 C 1.50702 * 109.46610 * 119.99853 * 2 1 3 5 5 C 1.34238 * 126.49899 * 255.35656 * 4 2 1 6 6 N 1.36826 * 109.93884 * 180.13820 * 5 4 2 7 7 C 1.46502 * 125.06435 * 179.81559 * 6 5 4 8 8 C 1.50705 * 109.47079 * 264.69562 * 7 6 5 9 9 O 1.21273 * 119.99930 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99896 * 179.97438 * 8 7 6 11 11 C 1.47536 * 125.65826 * 359.97438 * 10 8 7 12 12 C 1.55135 * 104.99772 * 203.94963 * 11 10 8 13 13 C 1.54014 * 101.44548 * 324.28300 * 12 11 10 14 14 C 1.52502 * 115.83847 * 163.34111 * 13 12 11 15 15 C 1.54022 * 86.67726 * 93.33923 * 14 13 12 16 16 O 1.42893 * 113.57626 * 269.85679 * 15 14 13 17 17 C 1.52505 * 115.78803 * 264.87993 * 13 12 11 18 18 C 1.47333 * 125.65760 * 179.97438 * 10 8 7 19 19 C 1.37692 * 109.87635 * 359.55192 * 6 5 4 20 20 C 1.39083 * 133.51790 * 180.28966 * 19 6 5 21 21 C 1.37799 * 119.77611 * 179.97438 * 20 19 6 22 22 C 1.38781 * 120.66863 * 0.02562 * 21 20 19 23 23 C 1.36668 * 120.52945 * 0.02562 * 22 21 20 24 24 C 1.39596 * 119.76234 * 359.95320 * 23 22 21 25 25 H 0.96698 * 114.00372 * 299.99870 * 1 2 3 26 26 H 1.08998 * 109.47279 * 239.99715 * 2 1 3 27 27 H 1.48496 * 110.00081 * 299.99546 * 3 2 1 28 28 H 1.48503 * 109.99898 * 61.31707 * 3 2 1 29 29 H 1.08005 * 125.03009 * 359.97083 * 5 4 2 30 30 H 1.09003 * 109.47094 * 144.69628 * 7 6 5 31 31 H 1.09004 * 109.47168 * 24.69539 * 7 6 5 32 32 H 1.09001 * 110.33521 * 322.83493 * 11 10 8 33 33 H 1.09006 * 110.33501 * 85.07199 * 11 10 8 34 34 H 1.08999 * 111.03072 * 82.29209 * 12 11 10 35 35 H 1.08998 * 111.03214 * 206.22523 * 12 11 10 36 36 H 1.09001 * 113.67886 * 207.78744 * 14 13 12 37 37 H 1.08998 * 113.67372 * 338.89689 * 14 13 12 38 38 H 1.08996 * 113.63957 * 139.09072 * 15 14 13 39 39 H 0.96702 * 113.99657 * 277.75735 * 16 15 14 40 40 H 1.08998 * 113.68163 * 21.06187 * 17 13 12 41 41 H 1.09003 * 113.67593 * 152.07444 * 17 13 12 42 42 H 1.09002 * 109.97824 * 297.37564 * 18 10 8 43 43 H 1.09000 * 109.97789 * 58.62277 * 18 10 8 44 44 H 1.07994 * 120.11327 * 359.97438 * 20 19 6 45 45 H 1.08000 * 119.66352 * 179.97438 * 21 20 19 46 46 H 1.08004 * 119.73630 * 179.97438 * 22 21 20 47 47 H 1.07994 * 120.12008 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4545 -0.1372 2.3258 6 7 2.8015 -1.0988 3.2352 7 6 3.4053 -0.8401 4.5447 8 6 4.9038 -0.9623 4.4398 9 8 5.4166 -1.2387 3.3762 10 7 5.6738 -0.7643 5.5281 11 6 5.1844 -0.4236 6.8776 12 6 6.3792 0.2816 7.5717 13 6 7.5734 -0.5014 6.9947 14 6 8.9386 0.1610 7.1471 15 6 9.0879 -0.6514 8.4471 16 8 8.5962 0.0270 9.6046 17 6 8.0851 -1.6561 7.8495 18 6 7.1440 -0.8523 5.5675 19 6 2.4931 -2.3456 2.7389 20 6 2.6275 -3.6360 3.2400 21 6 2.2140 -4.7106 2.4830 22 6 1.6641 -4.5193 1.2232 23 6 1.5237 -3.2601 0.7109 24 6 1.9355 -2.1570 1.4608 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5877 2.4586 1.2242 29 1 2.5851 0.9256 2.4670 30 1 3.0313 -1.5657 5.2670 31 1 3.1449 0.1664 4.8724 32 1 4.3318 0.2523 6.8118 33 1 4.9108 -1.3281 7.4208 34 1 6.4294 1.3335 7.2909 35 1 6.3242 0.1695 8.6546 36 1 9.6505 -0.1199 6.3710 37 1 8.8870 1.2379 7.3074 38 1 10.0858 -1.0652 8.5917 39 1 9.2211 0.6594 9.9849 40 1 7.3543 -2.0256 8.5689 41 1 8.5532 -2.4537 7.2727 42 1 7.4632 -1.8648 5.3206 43 1 7.5785 -0.1429 4.8631 44 1 3.0546 -3.7952 4.2190 45 1 2.3197 -5.7119 2.8738 46 1 1.3454 -5.3724 0.6426 47 1 1.0953 -3.1189 -0.2703 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058092_9818708.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:23:51 Heat of formation + Delta-G solvation = -3.261165 kcal Electronic energy + Delta-G solvation = -30126.000213 eV Core-core repulsion = 26049.342224 eV Total energy + Delta-G solvation = -4076.657989 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -42.49526 -41.87552 -40.16571 -38.03239 -37.80967 -37.42323 -35.45110 -34.02635 -31.66483 -31.19303 -30.11734 -29.84310 -28.28650 -27.09450 -25.72811 -24.47649 -23.56625 -23.05517 -22.39968 -20.83890 -20.43886 -19.86774 -18.61298 -18.47287 -18.01513 -17.63819 -17.57937 -16.96874 -16.49199 -16.35933 -16.26665 -15.87663 -15.77793 -15.42010 -15.28282 -14.95823 -14.71932 -14.62161 -14.56434 -14.10732 -13.98637 -13.74328 -13.66992 -13.57304 -13.45793 -13.20012 -12.87682 -12.74651 -12.58027 -12.41858 -12.26745 -11.95907 -11.86193 -11.71336 -11.60999 -11.38468 -11.06562 -10.82363 -10.39837 -10.33522 -9.81737 -9.00486 -8.51237 -4.84805 0.29712 0.81439 1.38623 1.40686 1.43282 1.63438 1.72272 2.00550 2.03746 2.88169 3.04951 3.16421 3.22127 3.31803 3.43236 3.49722 3.59325 3.60611 3.71483 3.75327 3.83071 3.87765 4.00053 4.08603 4.11826 4.25563 4.31763 4.33357 4.39489 4.50424 4.59858 4.61552 4.64051 4.67288 4.74436 4.77563 4.83205 4.84515 4.90056 4.92534 4.96677 5.01745 5.05946 5.18987 5.27861 5.66758 5.83121 5.88741 5.92029 6.20486 6.32866 6.38316 6.51904 6.61275 6.98004 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.036 4.036 3 Si 0.682 3.318 4 C -0.193 4.193 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.097 3.903 8 C 0.507 3.493 9 O -0.513 6.513 10 N -0.618 5.618 11 C 0.094 3.906 12 C -0.105 4.105 13 C -0.089 4.089 14 C -0.156 4.156 15 C 0.081 3.919 16 O -0.550 6.550 17 C -0.120 4.120 18 C 0.123 3.877 19 C 0.109 3.891 20 C -0.128 4.128 21 C -0.096 4.096 22 C -0.146 4.146 23 C -0.065 4.065 24 C -0.086 4.086 25 H 0.372 0.628 26 H 0.114 0.886 27 H -0.255 1.255 28 H -0.260 1.260 29 H 0.168 0.832 30 H 0.116 0.884 31 H 0.120 0.880 32 H 0.078 0.922 33 H 0.074 0.926 34 H 0.079 0.921 35 H 0.098 0.902 36 H 0.094 0.906 37 H 0.079 0.921 38 H 0.071 0.929 39 H 0.383 0.617 40 H 0.081 0.919 41 H 0.098 0.902 42 H 0.071 0.929 43 H 0.073 0.927 44 H 0.114 0.886 45 H 0.125 0.875 46 H 0.123 0.877 47 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.812 2.257 6.881 8.184 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.029 4.029 8 C 0.293 3.707 9 O -0.387 6.387 10 N -0.354 5.354 11 C -0.029 4.029 12 C -0.143 4.143 13 C -0.089 4.089 14 C -0.193 4.193 15 C 0.022 3.978 16 O -0.356 6.356 17 C -0.157 4.157 18 C 0.001 3.999 19 C 0.005 3.995 20 C -0.148 4.148 21 C -0.116 4.116 22 C -0.165 4.165 23 C -0.083 4.083 24 C -0.090 4.090 25 H 0.220 0.780 26 H 0.132 0.868 27 H -0.180 1.180 28 H -0.185 1.185 29 H 0.185 0.815 30 H 0.134 0.866 31 H 0.138 0.862 32 H 0.096 0.904 33 H 0.092 0.908 34 H 0.098 0.902 35 H 0.117 0.883 36 H 0.112 0.888 37 H 0.098 0.902 38 H 0.089 0.911 39 H 0.231 0.769 40 H 0.100 0.900 41 H 0.116 0.884 42 H 0.089 0.911 43 H 0.091 0.909 44 H 0.132 0.868 45 H 0.143 0.857 46 H 0.141 0.859 47 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.516 2.338 5.827 7.196 hybrid contribution -0.383 0.175 0.840 0.940 sum 3.134 2.514 6.667 7.784 Atomic orbital electron populations 1.86604 1.18154 1.79976 1.48951 1.24277 0.83273 1.09804 0.97348 0.95005 0.91830 0.74500 0.80364 1.20571 1.09911 0.92329 0.97219 1.21580 1.00914 0.93995 0.89414 1.43233 1.52395 1.04710 1.14583 1.21551 0.90716 1.05570 0.85072 1.20620 0.89050 0.77888 0.83179 1.90814 1.74422 1.46348 1.27139 1.48585 1.07523 1.70134 1.09173 1.22533 0.97981 0.99910 0.82449 1.22491 0.91534 0.98930 1.01347 1.21941 0.95410 0.97577 0.93990 1.23500 0.96074 1.00817 0.98959 1.22729 0.96846 0.93521 0.84743 1.86441 1.46141 1.59408 1.43588 1.22999 0.98754 0.95788 0.98191 1.21800 0.79555 1.02054 0.96507 1.18173 1.01199 0.85834 0.94320 1.19956 1.04962 0.89274 1.00629 1.20822 0.98342 0.97902 0.94487 1.20670 1.02475 0.96945 0.96387 1.20308 0.97944 0.90905 0.99174 1.18936 1.03426 0.92785 0.93867 0.78047 0.86776 1.17989 1.18540 0.81503 0.86582 0.86201 0.90359 0.90759 0.90223 0.88326 0.88801 0.90219 0.91131 0.76908 0.90015 0.88378 0.91058 0.90883 0.86811 0.85732 0.85911 0.85891 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.55 12.88 -35.23 -0.45 -2.00 16 2 C -0.04 -0.07 3.06 36.01 0.11 0.04 16 3 Si 0.68 0.19 30.83 -169.99 -5.24 -5.05 16 4 C -0.19 -0.57 5.57 -102.71 -0.57 -1.14 16 5 C 0.07 0.11 9.89 -16.73 -0.17 -0.05 16 6 N -0.47 -1.03 2.27 -115.70 -0.26 -1.29 16 7 C 0.10 -0.09 5.49 -5.19 -0.03 -0.12 16 8 C 0.51 0.83 7.92 -10.98 -0.09 0.74 16 9 O -0.51 -3.24 16.75 5.56 0.09 -3.15 16 10 N -0.62 0.31 3.34 -170.78 -0.57 -0.26 16 11 C 0.09 -0.31 6.71 -2.35 -0.02 -0.32 16 12 C -0.11 0.30 6.01 -25.07 -0.15 0.15 16 13 C -0.09 0.21 0.94 -154.45 -0.14 0.06 16 14 C -0.16 0.46 7.23 -26.45 -0.19 0.27 16 15 C 0.08 -0.22 5.27 -25.69 -0.14 -0.36 16 16 O -0.55 1.16 12.41 -35.23 -0.44 0.73 16 17 C -0.12 0.28 7.14 -26.45 -0.19 0.09 16 18 C 0.12 -0.06 6.37 -3.53 -0.02 -0.09 16 19 C 0.11 0.45 6.80 -83.99 -0.57 -0.12 16 20 C -0.13 -0.41 10.00 -39.43 -0.39 -0.81 16 21 C -0.10 -0.26 10.01 -39.54 -0.40 -0.65 16 22 C -0.15 -0.44 9.97 -39.95 -0.40 -0.84 16 23 C -0.06 -0.26 10.05 -39.64 -0.40 -0.66 16 24 C -0.09 -0.40 6.35 -105.14 -0.67 -1.07 16 25 H 0.37 -0.05 8.70 45.56 0.40 0.35 16 26 H 0.11 0.20 7.96 -51.93 -0.41 -0.22 16 27 H -0.26 -0.85 7.11 56.52 0.40 -0.45 16 28 H -0.26 -0.30 6.99 56.52 0.40 0.10 16 29 H 0.17 -0.15 6.28 -52.48 -0.33 -0.48 16 30 H 0.12 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.12 -0.48 7.82 -51.93 -0.41 -0.88 16 32 H 0.08 -0.39 7.48 -51.93 -0.39 -0.78 16 33 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 34 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 35 H 0.10 -0.24 7.20 -51.93 -0.37 -0.61 16 36 H 0.09 -0.31 8.14 -51.93 -0.42 -0.73 16 37 H 0.08 -0.23 8.12 -51.93 -0.42 -0.65 16 38 H 0.07 -0.24 8.14 -51.93 -0.42 -0.66 16 39 H 0.38 -2.15 9.12 45.56 0.42 -1.74 16 40 H 0.08 -0.13 8.12 -51.93 -0.42 -0.56 16 41 H 0.10 -0.28 8.01 -51.93 -0.42 -0.70 16 42 H 0.07 0.02 7.86 -51.93 -0.41 -0.39 16 43 H 0.07 0.03 8.09 -51.93 -0.42 -0.39 16 44 H 0.11 0.17 8.06 -52.49 -0.42 -0.26 16 45 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 46 H 0.12 0.12 8.06 -52.48 -0.42 -0.30 16 47 H 0.12 0.37 8.06 -52.49 -0.42 -0.05 16 LS Contribution 385.05 15.07 5.80 5.80 Total: 0.00 -10.28 385.05 -11.68 -21.96 By element: Atomic # 1 Polarization: -5.69 SS G_CDS: -6.20 Total: -11.88 kcal Atomic # 6 Polarization: -0.44 SS G_CDS: -4.42 Total: -4.86 kcal Atomic # 7 Polarization: -0.72 SS G_CDS: -0.83 Total: -1.55 kcal Atomic # 8 Polarization: -3.62 SS G_CDS: -0.80 Total: -4.42 kcal Atomic # 14 Polarization: 0.19 SS G_CDS: -5.24 Total: -5.05 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -10.28 -11.68 -21.96 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_9818708.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.697 kcal (2) G-P(sol) polarization free energy of solvation -10.276 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.422 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.959 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds