Wall clock time and date at job start Sun Mar 7 2021 11:23:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86301 * 109.46834 * 2 1 4 4 C 1.50702 * 109.46610 * 119.99853 * 2 1 3 5 5 C 1.34238 * 126.49899 * 255.35656 * 4 2 1 6 6 N 1.36826 * 109.93884 * 180.13820 * 5 4 2 7 7 C 1.46502 * 125.06435 * 179.81559 * 6 5 4 8 8 C 1.50705 * 109.47079 * 264.69562 * 7 6 5 9 9 O 1.21273 * 119.99930 * 359.97438 * 8 7 6 10 10 N 1.34779 * 119.99896 * 179.97438 * 8 7 6 11 11 C 1.47536 * 125.65826 * 359.97438 * 10 8 7 12 12 C 1.55135 * 104.99772 * 203.94963 * 11 10 8 13 13 C 1.54014 * 101.44548 * 324.28300 * 12 11 10 14 14 C 1.52502 * 115.83847 * 163.34111 * 13 12 11 15 15 C 1.54022 * 86.67726 * 93.33923 * 14 13 12 16 16 O 1.42893 * 113.57626 * 269.85679 * 15 14 13 17 17 C 1.52505 * 115.78803 * 264.87993 * 13 12 11 18 18 C 1.47333 * 125.65760 * 179.97438 * 10 8 7 19 19 C 1.37692 * 109.87635 * 359.55192 * 6 5 4 20 20 C 1.39083 * 133.51790 * 180.28966 * 19 6 5 21 21 C 1.37799 * 119.77611 * 179.97438 * 20 19 6 22 22 C 1.38781 * 120.66863 * 0.02562 * 21 20 19 23 23 C 1.36668 * 120.52945 * 0.02562 * 22 21 20 24 24 C 1.39596 * 119.76234 * 359.95320 * 23 22 21 25 25 H 0.96698 * 114.00372 * 299.99870 * 1 2 3 26 26 H 1.08998 * 109.47279 * 239.99715 * 2 1 3 27 27 H 1.48496 * 110.00081 * 299.99546 * 3 2 1 28 28 H 1.48503 * 109.99898 * 61.31707 * 3 2 1 29 29 H 1.08005 * 125.03009 * 359.97083 * 5 4 2 30 30 H 1.09003 * 109.47094 * 144.69628 * 7 6 5 31 31 H 1.09004 * 109.47168 * 24.69539 * 7 6 5 32 32 H 1.09001 * 110.33521 * 322.83493 * 11 10 8 33 33 H 1.09006 * 110.33501 * 85.07199 * 11 10 8 34 34 H 1.08999 * 111.03072 * 82.29209 * 12 11 10 35 35 H 1.08998 * 111.03214 * 206.22523 * 12 11 10 36 36 H 1.09001 * 113.67886 * 207.78744 * 14 13 12 37 37 H 1.08998 * 113.67372 * 338.89689 * 14 13 12 38 38 H 1.08996 * 113.63957 * 139.09072 * 15 14 13 39 39 H 0.96702 * 113.99657 * 277.75735 * 16 15 14 40 40 H 1.08998 * 113.68163 * 21.06187 * 17 13 12 41 41 H 1.09003 * 113.67593 * 152.07444 * 17 13 12 42 42 H 1.09002 * 109.97824 * 297.37564 * 18 10 8 43 43 H 1.09000 * 109.97789 * 58.62277 * 18 10 8 44 44 H 1.07994 * 120.11327 * 359.97438 * 20 19 6 45 45 H 1.08000 * 119.66352 * 179.97438 * 21 20 19 46 46 H 1.08004 * 119.73630 * 179.97438 * 22 21 20 47 47 H 1.07994 * 120.12008 * 179.97438 * 23 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.4545 -0.1372 2.3258 6 7 2.8015 -1.0988 3.2352 7 6 3.4053 -0.8401 4.5447 8 6 4.9038 -0.9623 4.4398 9 8 5.4166 -1.2387 3.3762 10 7 5.6738 -0.7643 5.5281 11 6 5.1844 -0.4236 6.8776 12 6 6.3792 0.2816 7.5717 13 6 7.5734 -0.5014 6.9947 14 6 8.9386 0.1610 7.1471 15 6 9.0879 -0.6514 8.4471 16 8 8.5962 0.0270 9.6046 17 6 8.0851 -1.6561 7.8495 18 6 7.1440 -0.8523 5.5675 19 6 2.4931 -2.3456 2.7389 20 6 2.6275 -3.6360 3.2400 21 6 2.2140 -4.7106 2.4830 22 6 1.6641 -4.5193 1.2232 23 6 1.5237 -3.2601 0.7109 24 6 1.9355 -2.1570 1.4608 25 1 -0.3934 0.4417 0.7650 26 1 1.7924 -0.5139 -0.8899 27 1 1.5615 2.4679 -1.2085 28 1 1.5877 2.4586 1.2242 29 1 2.5851 0.9256 2.4670 30 1 3.0313 -1.5657 5.2670 31 1 3.1449 0.1664 4.8724 32 1 4.3318 0.2523 6.8118 33 1 4.9108 -1.3281 7.4208 34 1 6.4294 1.3335 7.2909 35 1 6.3242 0.1695 8.6546 36 1 9.6505 -0.1199 6.3710 37 1 8.8870 1.2379 7.3074 38 1 10.0858 -1.0652 8.5917 39 1 9.2211 0.6594 9.9849 40 1 7.3543 -2.0256 8.5689 41 1 8.5532 -2.4537 7.2727 42 1 7.4632 -1.8648 5.3206 43 1 7.5785 -0.1429 4.8631 44 1 3.0546 -3.7952 4.2190 45 1 2.3197 -5.7119 2.8738 46 1 1.3454 -5.3724 0.6426 47 1 1.0953 -3.1189 -0.2703 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17058092_9818708.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 11:23:50 Heat of formation + Delta-G solvation = -3.540480 kcal Electronic energy + Delta-G solvation = -30126.012325 eV Core-core repulsion = 26049.342224 eV Total energy + Delta-G solvation = -4076.670101 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 343.162 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.59499 -41.75671 -40.19127 -38.17969 -37.83056 -37.47277 -35.30569 -34.11811 -31.72252 -31.12648 -30.27384 -29.84925 -28.26599 -26.88707 -25.80118 -24.39547 -23.69440 -22.91743 -22.49891 -20.90818 -20.47134 -19.71898 -18.63434 -18.43506 -17.92759 -17.70058 -17.55731 -17.01824 -16.54294 -16.43434 -16.22545 -15.93765 -15.76217 -15.47304 -15.16206 -14.89058 -14.84993 -14.71468 -14.64883 -14.10210 -14.00105 -13.66592 -13.58577 -13.49720 -13.37117 -13.17453 -12.74139 -12.65296 -12.58915 -12.53457 -12.41730 -12.02218 -11.78248 -11.75313 -11.50878 -11.23279 -11.12548 -10.63061 -10.55900 -10.46386 -9.80684 -9.19128 -8.66790 -4.87263 0.11342 0.61089 1.33044 1.34086 1.39058 1.57108 1.63543 1.95482 2.01236 2.91636 3.14510 3.23111 3.41035 3.51983 3.53520 3.57712 3.60924 3.67387 3.78741 3.81067 3.92779 3.97619 4.04059 4.19256 4.23394 4.26238 4.33278 4.47352 4.48083 4.56951 4.57556 4.68282 4.69359 4.72942 4.75911 4.77362 4.86874 4.87525 4.98031 5.04873 5.09855 5.11303 5.16568 5.27780 5.36407 5.48543 5.64009 5.71253 5.72698 6.15477 6.20119 6.35904 6.59355 6.90961 6.94592 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.552 6.552 2 C -0.050 4.050 3 Si 0.763 3.237 4 C -0.212 4.212 5 C 0.072 3.928 6 N -0.468 5.468 7 C 0.095 3.905 8 C 0.504 3.496 9 O -0.571 6.571 10 N -0.614 5.614 11 C 0.091 3.909 12 C -0.101 4.101 13 C -0.084 4.084 14 C -0.152 4.152 15 C 0.083 3.917 16 O -0.564 6.564 17 C -0.123 4.123 18 C 0.121 3.879 19 C 0.090 3.910 20 C -0.136 4.136 21 C -0.106 4.106 22 C -0.153 4.153 23 C -0.086 4.086 24 C -0.115 4.115 25 H 0.384 0.616 26 H 0.105 0.895 27 H -0.299 1.299 28 H -0.260 1.260 29 H 0.196 0.804 30 H 0.138 0.862 31 H 0.158 0.842 32 H 0.105 0.895 33 H 0.084 0.916 34 H 0.081 0.919 35 H 0.098 0.902 36 H 0.095 0.905 37 H 0.081 0.919 38 H 0.078 0.922 39 H 0.397 0.603 40 H 0.075 0.925 41 H 0.099 0.901 42 H 0.058 0.942 43 H 0.060 0.940 44 H 0.129 0.871 45 H 0.146 0.854 46 H 0.138 0.862 47 H 0.121 0.879 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.882 3.202 8.933 10.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.360 6.360 2 C -0.158 4.158 3 Si 0.665 3.335 4 C -0.219 4.219 5 C -0.053 4.053 6 N -0.150 5.150 7 C -0.029 4.029 8 C 0.292 3.708 9 O -0.449 6.449 10 N -0.348 5.348 11 C -0.031 4.031 12 C -0.138 4.138 13 C -0.085 4.085 14 C -0.190 4.190 15 C 0.024 3.976 16 O -0.373 6.373 17 C -0.160 4.160 18 C -0.002 4.002 19 C -0.015 4.015 20 C -0.156 4.156 21 C -0.125 4.125 22 C -0.172 4.172 23 C -0.105 4.105 24 C -0.119 4.119 25 H 0.233 0.767 26 H 0.123 0.877 27 H -0.227 1.227 28 H -0.185 1.185 29 H 0.213 0.787 30 H 0.156 0.844 31 H 0.175 0.825 32 H 0.123 0.877 33 H 0.102 0.898 34 H 0.100 0.900 35 H 0.116 0.884 36 H 0.113 0.887 37 H 0.100 0.900 38 H 0.096 0.904 39 H 0.247 0.753 40 H 0.094 0.906 41 H 0.118 0.882 42 H 0.076 0.924 43 H 0.079 0.921 44 H 0.147 0.853 45 H 0.164 0.836 46 H 0.156 0.844 47 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges 3.595 3.278 7.957 9.327 hybrid contribution -0.374 -0.149 0.220 0.459 sum 3.221 3.128 8.178 9.329 Atomic orbital electron populations 1.86560 1.18975 1.80598 1.49840 1.24574 0.82866 1.11572 0.96805 0.94027 0.90519 0.71203 0.77710 1.20712 1.11182 0.91837 0.98204 1.22012 0.99442 0.95122 0.88760 1.43443 1.51919 1.04051 1.15596 1.21879 0.88550 1.08414 0.84064 1.21080 0.90151 0.76914 0.82663 1.90790 1.75574 1.49240 1.29314 1.48671 1.07449 1.68816 1.09853 1.22763 0.98604 1.00935 0.80751 1.22458 0.91267 0.98910 1.01197 1.21938 0.96032 0.97851 0.92689 1.23485 0.95707 1.00863 0.98967 1.22708 0.96947 0.93304 0.84669 1.86400 1.47173 1.59956 1.43744 1.23023 0.98899 0.95976 0.98143 1.21795 0.79943 1.00955 0.97482 1.18413 1.01608 0.86911 0.94520 1.20235 1.04803 0.89221 1.01382 1.21133 0.98041 0.98928 0.94359 1.20931 1.02264 0.97094 0.96870 1.20471 0.98938 0.91618 0.99469 1.19342 1.04065 0.93872 0.94655 0.76739 0.87725 1.22701 1.18524 0.78718 0.84404 0.82462 0.87697 0.89827 0.90050 0.88392 0.88655 0.90036 0.90401 0.75270 0.90585 0.88232 0.92400 0.92131 0.85318 0.83631 0.84381 0.86093 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.91 12.88 -148.98 -1.92 -5.83 16 2 C -0.05 -0.24 3.06 71.24 0.22 -0.02 16 3 Si 0.76 0.33 30.83 68.60 2.11 2.45 16 4 C -0.21 -1.44 5.57 -18.63 -0.10 -1.54 16 5 C 0.07 0.21 9.89 83.00 0.82 1.03 16 6 N -0.47 -1.83 2.27 -519.97 -1.18 -3.01 16 7 C 0.10 -0.35 5.49 85.63 0.47 0.12 16 8 C 0.50 1.46 7.92 87.66 0.69 2.15 16 9 O -0.57 -7.83 16.75 -3.01 -0.05 -7.88 16 10 N -0.61 1.00 3.34 -812.60 -2.71 -1.71 16 11 C 0.09 -0.76 6.71 86.91 0.58 -0.18 16 12 C -0.10 0.71 6.01 31.67 0.19 0.90 16 13 C -0.08 0.42 0.94 -52.15 -0.05 0.37 16 14 C -0.15 0.94 7.23 30.77 0.22 1.16 16 15 C 0.08 -0.49 5.27 31.27 0.16 -0.33 16 16 O -0.56 2.86 12.41 -148.98 -1.85 1.01 16 17 C -0.12 0.59 7.14 30.77 0.22 0.81 16 18 C 0.12 -0.06 6.37 86.26 0.55 0.49 16 19 C 0.09 0.81 6.80 39.03 0.27 1.07 16 20 C -0.14 -0.94 10.00 22.37 0.22 -0.71 16 21 C -0.11 -0.62 10.01 22.30 0.22 -0.40 16 22 C -0.15 -1.11 9.97 22.03 0.22 -0.89 16 23 C -0.09 -0.88 10.05 22.23 0.22 -0.66 16 24 C -0.12 -1.26 6.35 -20.20 -0.13 -1.39 16 25 H 0.38 0.17 8.70 -74.06 -0.64 -0.47 16 26 H 0.10 0.60 7.96 -2.39 -0.02 0.58 16 27 H -0.30 -2.32 7.11 99.48 0.71 -1.61 16 28 H -0.26 -0.11 6.99 99.48 0.70 0.59 16 29 H 0.20 -0.75 6.28 -2.91 -0.02 -0.77 16 30 H 0.14 -1.10 8.14 -2.39 -0.02 -1.12 16 31 H 0.16 -1.80 7.82 -2.38 -0.02 -1.82 16 32 H 0.10 -1.40 7.48 -2.39 -0.02 -1.42 16 33 H 0.08 -0.80 8.14 -2.38 -0.02 -0.82 16 34 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 35 H 0.10 -0.61 7.20 -2.39 -0.02 -0.63 16 36 H 0.09 -0.62 8.14 -2.39 -0.02 -0.64 16 37 H 0.08 -0.52 8.12 -2.39 -0.02 -0.54 16 38 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 39 H 0.40 -4.81 9.12 -74.06 -0.68 -5.48 16 40 H 0.08 -0.27 8.12 -2.39 -0.02 -0.29 16 41 H 0.10 -0.54 8.01 -2.39 -0.02 -0.56 16 42 H 0.06 0.12 7.86 -2.39 -0.02 0.10 16 43 H 0.06 0.12 8.09 -2.39 -0.02 0.10 16 44 H 0.13 0.34 8.06 -2.91 -0.02 0.32 16 45 H 0.15 0.09 8.06 -2.91 -0.02 0.07 16 46 H 0.14 0.40 8.06 -2.91 -0.02 0.37 16 47 H 0.12 1.08 8.06 -2.91 -0.02 1.05 16 Total: 0.00 -26.28 385.05 -0.88 -27.16 By element: Atomic # 1 Polarization: -13.88 SS G_CDS: -0.30 Total: -14.18 kcal Atomic # 6 Polarization: -3.02 SS G_CDS: 5.01 Total: 1.99 kcal Atomic # 7 Polarization: -0.82 SS G_CDS: -3.89 Total: -4.72 kcal Atomic # 8 Polarization: -8.88 SS G_CDS: -3.82 Total: -12.70 kcal Atomic # 14 Polarization: 0.33 SS G_CDS: 2.11 Total: 2.45 kcal Total: -26.28 -0.88 -27.16 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058092_9818708.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 23.622 kcal (2) G-P(sol) polarization free energy of solvation -26.279 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -2.657 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.884 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -3.540 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds