Wall clock time and date at job start Sun Mar 7 2021 06:41:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.37644 * 125.67633 * 2 1 4 4 C 1.46670 * 126.22451 * 0.02562 * 3 2 1 5 5 O 1.21703 * 119.99990 * 355.02693 * 4 3 2 6 6 N 1.34775 * 120.00013 * 175.01977 * 4 3 2 7 7 C 1.46500 * 120.00104 * 185.14048 * 6 4 3 8 8 H 1.09004 * 112.85180 * 23.79681 * 7 6 4 9 9 C 1.53775 * 113.61585 * 155.00041 * 7 6 4 10 10 C 1.53778 * 87.08434 * 139.97905 * 9 7 6 11 11 C 1.53002 * 113.61828 * 219.93485 * 10 9 7 12 12 C 1.53000 * 113.61733 * 89.11413 * 10 9 7 13 13 O 1.42897 * 109.47242 * 180.02562 * 12 10 9 14 14 C 1.53782 * 87.08204 * 334.56674 * 10 9 7 15 15 C 1.37884 * 107.54668 * 180.02562 * 3 2 1 16 16 C 1.39874 * 107.09633 * 359.76506 * 15 3 2 17 17 Br 1.89096 * 126.07429 * 180.24010 * 16 15 3 18 18 C 1.35507 * 107.84948 * 0.38047 * 16 15 3 19 19 C 1.50706 * 125.56883 * 179.87976 * 18 16 15 20 20 O 1.42898 * 109.47014 * 114.88769 * 19 18 16 21 21 Si 1.86295 * 109.46837 * 234.88705 * 19 18 16 22 22 H 1.08993 * 109.47545 * 275.46595 * 1 2 3 23 23 H 1.09000 * 109.47251 * 35.46764 * 1 2 3 24 24 H 1.08996 * 109.47082 * 155.46060 * 1 2 3 25 25 H 0.96999 * 120.00323 * 5.13608 * 6 4 3 26 26 H 1.09004 * 113.61347 * 254.52901 * 9 7 6 27 27 H 1.08996 * 113.61541 * 25.43242 * 9 7 6 28 28 H 1.09006 * 109.46670 * 59.99633 * 11 10 9 29 29 H 1.08996 * 109.47144 * 179.97438 * 11 10 9 30 30 H 1.09001 * 109.46753 * 300.00262 * 11 10 9 31 31 H 1.09000 * 109.47100 * 300.00224 * 12 10 9 32 32 H 1.09003 * 109.47021 * 60.00057 * 12 10 9 33 33 H 0.96703 * 114.00066 * 180.02562 * 13 12 10 34 34 H 1.09005 * 113.61500 * 270.88855 * 14 10 9 35 35 H 1.08996 * 113.61601 * 139.97927 * 14 10 9 36 36 H 1.08003 * 126.44935 * 180.02562 * 15 3 2 37 37 H 1.08999 * 109.47126 * 354.88725 * 19 18 16 38 38 H 0.96699 * 114.00164 * 59.99848 * 20 19 18 39 39 H 1.48499 * 110.00173 * 63.68779 * 21 19 18 40 40 H 1.48503 * 109.99690 * 185.00612 * 21 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2677 1.1181 0.0000 4 6 1.8121 2.5122 0.0005 5 8 0.6249 2.7645 -0.0903 6 7 2.7080 3.5140 0.1018 7 6 2.2474 4.9000 0.2158 8 1 1.2357 4.9785 0.6140 9 6 3.2566 5.8294 0.9103 10 6 2.8740 6.8939 -0.1315 11 6 4.0649 7.7072 -0.6427 12 6 1.6941 7.7706 0.2928 13 8 1.4148 8.7234 -0.7349 14 6 2.4765 5.7320 -1.0572 15 6 3.5781 0.6891 -0.0006 16 6 3.5529 -0.7094 0.0045 17 35 5.0609 -1.8502 0.0126 18 6 2.2558 -1.1015 -0.0005 19 6 1.7713 -2.5286 -0.0001 20 8 1.0759 -2.7952 1.2195 21 14 0.6214 -2.7942 -1.4415 22 1 -0.3634 0.0979 1.0229 23 1 -0.3634 0.8370 -0.5963 24 1 -0.3633 -0.9348 -0.4268 25 1 3.6579 3.3173 0.0993 26 1 2.9758 6.0952 1.9294 27 1 4.2894 5.4908 0.8293 28 1 4.7873 7.0386 -1.1109 29 1 3.7189 8.4375 -1.3741 30 1 4.5368 8.2245 0.1927 31 1 0.8166 7.1449 0.4558 32 1 1.9437 8.2939 1.2158 33 1 0.6766 9.3146 -0.5331 34 1 3.2961 5.3665 -1.6759 35 1 1.5659 5.9190 -1.6263 36 1 4.4582 1.3150 -0.0004 37 1 2.6241 -3.2018 -0.0868 38 1 0.3034 -2.2315 1.3631 39 1 1.3558 -2.6068 -2.7185 40 1 0.0426 -4.1606 -1.3843 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17058578_5000100.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:41:52 Heat of formation + Delta-G solvation = -36.430785 kcal Electronic energy + Delta-G solvation = -24356.260759 eV Core-core repulsion = 20606.788605 eV Total energy + Delta-G solvation = -3749.472153 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.057 amu Computer time = 0.62 seconds Orbital eigenvalues (eV) -42.91188 -41.39909 -39.68155 -37.90614 -37.22552 -35.19944 -34.30367 -32.25747 -31.03264 -30.24909 -27.54690 -27.47789 -26.97273 -26.84518 -23.79452 -22.60134 -21.56505 -20.72431 -19.55840 -18.91362 -18.39120 -18.08155 -17.51156 -17.14853 -16.81890 -16.25304 -16.05240 -15.90479 -15.73362 -15.24547 -14.74882 -14.47080 -14.41892 -14.33802 -14.23649 -14.18517 -13.81573 -13.68159 -13.35912 -13.30237 -13.06670 -12.93526 -12.69032 -12.28291 -11.89474 -11.87654 -11.55317 -11.35423 -11.24807 -11.00110 -10.86736 -10.83431 -10.16083 -9.81652 -9.26688 -5.23801 0.14449 0.65278 0.90704 1.18486 1.40481 1.52720 1.82625 2.17430 2.22063 2.98387 3.11997 3.30411 3.35936 3.44876 3.52480 3.59308 3.69391 3.89381 3.91473 4.04511 4.12339 4.16402 4.32882 4.38613 4.42825 4.45366 4.49270 4.61236 4.66391 4.67624 4.76359 4.88210 4.98067 5.10307 5.18949 5.22541 5.38514 5.45139 5.54384 5.77355 6.22323 6.34469 6.63760 7.03785 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.060 3.940 2 N -0.395 5.395 3 C -0.032 4.032 4 C 0.594 3.406 5 O -0.541 6.541 6 N -0.706 5.706 7 C 0.124 3.876 8 H 0.117 0.883 9 C -0.135 4.135 10 C -0.081 4.081 11 C -0.131 4.131 12 C 0.097 3.903 13 O -0.568 6.568 14 C -0.138 4.138 15 C -0.109 4.109 16 C -0.158 4.158 17 Br -0.020 7.020 18 C 0.051 3.949 19 C -0.048 4.048 20 O -0.528 6.528 21 Si 0.660 3.340 22 H 0.094 0.906 23 H 0.118 0.882 24 H 0.086 0.914 25 H 0.405 0.595 26 H 0.079 0.921 27 H 0.095 0.905 28 H 0.055 0.945 29 H 0.068 0.932 30 H 0.055 0.945 31 H 0.049 0.951 32 H 0.050 0.950 33 H 0.382 0.618 34 H 0.088 0.912 35 H 0.077 0.923 36 H 0.156 0.844 37 H 0.136 0.864 38 H 0.373 0.627 39 H -0.243 1.243 40 H -0.235 1.235 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.712 3.200 1.191 3.820 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.069 5.069 3 C -0.146 4.146 4 C 0.382 3.618 5 O -0.420 6.420 6 N -0.357 5.357 7 C 0.020 3.980 8 H 0.135 0.865 9 C -0.173 4.173 10 C -0.082 4.082 11 C -0.188 4.188 12 C 0.019 3.981 13 O -0.374 6.374 14 C -0.177 4.177 15 C -0.136 4.136 16 C -0.244 4.244 17 Br 0.064 6.936 18 C -0.069 4.069 19 C -0.158 4.158 20 O -0.332 6.332 21 Si 0.558 3.442 22 H 0.112 0.888 23 H 0.136 0.864 24 H 0.104 0.896 25 H 0.240 0.760 26 H 0.097 0.903 27 H 0.113 0.887 28 H 0.074 0.926 29 H 0.087 0.913 30 H 0.074 0.926 31 H 0.067 0.933 32 H 0.068 0.932 33 H 0.229 0.771 34 H 0.107 0.893 35 H 0.095 0.905 36 H 0.173 0.827 37 H 0.154 0.846 38 H 0.220 0.780 39 H -0.166 1.166 40 H -0.158 1.158 Dipole moment (debyes) X Y Z Total from point charges -1.620 1.760 0.209 2.401 hybrid contribution 0.388 0.330 0.622 0.804 sum -1.232 2.090 0.831 2.564 Atomic orbital electron populations 1.22541 0.75261 1.04661 1.05478 1.43686 1.06927 1.03981 1.52270 1.19985 0.89623 0.87711 1.17309 1.16851 0.85748 0.83154 0.76079 1.90816 1.16132 1.84686 1.50335 1.45631 1.09715 1.05977 1.74351 1.22654 0.99640 0.78163 0.97567 0.86524 1.23475 0.99974 0.94889 0.98970 1.21569 0.95998 0.93560 0.97067 1.21596 0.95762 1.00074 1.01376 1.21916 0.95924 0.90418 0.89861 1.86460 1.56384 1.49712 1.44844 1.23563 1.02755 0.94667 0.96721 1.21229 0.95248 0.93020 1.04122 1.20789 0.91252 0.94374 1.17946 1.96682 1.35723 1.63033 1.98180 1.20714 0.89778 0.89803 1.06620 1.24855 1.02930 0.90528 0.97533 1.86628 1.45069 1.62265 1.39248 0.95406 0.85766 0.86416 0.76655 0.88809 0.86370 0.89596 0.75990 0.90263 0.88682 0.92579 0.91252 0.92562 0.93264 0.93174 0.77120 0.89334 0.90463 0.82656 0.84649 0.77970 1.16628 1.15829 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -0.17 8.94 59.85 0.53 0.36 16 2 N -0.39 -0.01 3.10 -115.59 -0.36 -0.37 16 3 C -0.03 -0.02 6.88 -81.98 -0.56 -0.59 16 4 C 0.59 0.65 7.77 -12.86 -0.10 0.55 16 5 O -0.54 -1.89 14.41 5.19 0.07 -1.82 16 6 N -0.71 0.89 5.34 -54.32 -0.29 0.60 16 7 C 0.12 -0.15 3.86 -67.12 -0.26 -0.41 16 8 H 0.12 0.00 7.04 -51.93 -0.37 -0.37 16 9 C -0.13 0.35 6.98 -25.92 -0.18 0.17 16 10 C -0.08 0.10 1.19 -153.70 -0.18 -0.08 16 11 C -0.13 0.09 9.08 37.16 0.34 0.43 16 12 C 0.10 -0.13 6.39 37.16 0.24 0.11 16 13 O -0.57 0.08 12.64 -35.23 -0.45 -0.37 16 14 C -0.14 0.10 7.00 -25.91 -0.18 -0.08 16 15 C -0.11 -0.04 10.34 -39.10 -0.40 -0.45 16 16 C -0.16 -0.28 6.53 -39.94 -0.26 -0.54 16 17 Br -0.02 -0.04 33.06 -68.01 -2.25 -2.29 16 18 C 0.05 0.05 5.29 -81.90 -0.43 -0.38 16 19 C -0.05 -0.02 2.87 36.01 0.10 0.09 16 20 O -0.53 -0.16 12.88 -35.23 -0.45 -0.61 16 21 Si 0.66 -0.55 29.25 -169.99 -4.97 -5.52 16 22 H 0.09 -0.39 8.14 -51.93 -0.42 -0.82 16 23 H 0.12 -0.22 6.54 -51.93 -0.34 -0.56 16 24 H 0.09 -0.46 3.78 -51.93 -0.20 -0.65 16 25 H 0.40 -1.37 7.63 -40.82 -0.31 -1.68 16 26 H 0.08 -0.23 8.10 -51.93 -0.42 -0.65 16 27 H 0.09 -0.33 8.08 -51.93 -0.42 -0.75 16 28 H 0.06 -0.07 7.95 -51.93 -0.41 -0.48 16 29 H 0.07 0.06 7.32 -51.93 -0.38 -0.32 16 30 H 0.06 -0.06 8.14 -51.93 -0.42 -0.48 16 31 H 0.05 -0.09 7.34 -51.93 -0.38 -0.47 16 32 H 0.05 -0.11 8.14 -51.93 -0.42 -0.53 16 33 H 0.38 -1.55 9.12 45.56 0.42 -1.14 16 34 H 0.09 -0.09 7.97 -51.93 -0.41 -0.50 16 35 H 0.08 0.06 8.10 -51.93 -0.42 -0.36 16 36 H 0.16 -0.33 7.45 -52.48 -0.39 -0.72 16 37 H 0.14 0.15 6.96 -51.93 -0.36 -0.21 16 38 H 0.37 -1.34 7.45 45.56 0.34 -1.00 16 39 H -0.24 -0.51 7.11 56.52 0.40 -0.11 16 40 H -0.23 -0.34 7.11 56.52 0.40 0.06 16 LS Contribution 343.26 15.07 5.17 5.17 Total: 0.00 -8.35 343.26 -9.40 -17.75 By element: Atomic # 1 Polarization: -7.21 SS G_CDS: -4.52 Total: -11.73 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: -1.35 Total: -0.82 kcal Atomic # 7 Polarization: 0.88 SS G_CDS: -0.65 Total: 0.23 kcal Atomic # 8 Polarization: -1.97 SS G_CDS: -0.82 Total: -2.79 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -4.97 Total: -5.52 kcal Atomic # 35 Polarization: -0.04 SS G_CDS: -2.25 Total: -2.29 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -8.35 -9.40 -17.75 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17058578_5000100.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -18.683 kcal (2) G-P(sol) polarization free energy of solvation -8.350 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -27.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.398 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.748 kcal (6) G-S(sol) free energy of system = (1) + (5) -36.431 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.62 seconds