Wall clock time and date at job start Sun Mar 7 2021 08:58:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46495 * 1 3 3 C 1.46495 * 120.00274 * 2 1 4 4 C 1.34779 * 119.99920 * 180.02562 * 2 1 3 5 5 O 1.21287 * 120.00140 * 4.89667 * 4 2 1 6 6 C 1.50697 * 119.99933 * 184.90383 * 4 2 1 7 7 H 1.09006 * 109.47031 * 309.73894 * 6 4 2 8 8 C 1.52998 * 109.47479 * 69.73728 * 6 4 2 9 9 C 1.52997 * 109.47048 * 180.02562 * 8 6 4 10 10 C 1.53005 * 109.47448 * 300.00006 * 9 8 6 11 11 H 1.09003 * 109.46646 * 300.00479 * 10 9 8 12 12 N 1.46497 * 109.47233 * 180.02562 * 10 9 8 13 13 C 1.34784 * 119.99833 * 85.00165 * 12 10 9 14 14 O 1.21591 * 119.99894 * 359.97438 * 13 12 10 15 15 C 1.47574 * 119.99890 * 179.97438 * 13 12 10 16 16 C 1.40203 * 119.83373 * 359.72827 * 15 13 12 17 17 C 1.36227 * 120.37859 * 179.77842 * 16 15 13 18 18 C 1.39874 * 119.96132 * 0.47312 * 17 16 15 19 19 C 1.46260 * 133.84422 * 179.77975 * 18 17 16 20 20 C 1.50698 * 126.47898 * 0.02562 * 19 18 17 21 21 O 1.42897 * 109.47099 * 75.02851 * 20 19 18 22 22 Si 1.86300 * 109.46620 * 195.02263 * 20 19 18 23 23 C 1.34460 * 107.03345 * 179.97438 * 19 18 17 24 24 N 1.36555 * 109.98602 * 0.02562 * 23 19 18 25 25 C 1.37827 * 109.86572 * 359.97438 * 24 23 19 26 26 C 1.38646 * 133.38554 * 180.02562 * 25 24 23 27 27 C 1.52997 * 109.46635 * 59.99917 * 10 9 8 28 28 C 1.53000 * 109.47652 * 299.99812 * 27 10 9 29 29 H 1.09007 * 109.47666 * 180.02562 * 1 2 3 30 30 H 1.09003 * 109.47448 * 299.99704 * 1 2 3 31 31 H 1.09001 * 109.47639 * 60.00175 * 1 2 3 32 32 H 1.09000 * 109.47046 * 263.32101 * 3 2 1 33 33 H 1.09001 * 109.46603 * 23.31314 * 3 2 1 34 34 H 1.09000 * 109.47374 * 143.31247 * 3 2 1 35 35 H 1.08998 * 109.47178 * 300.00625 * 8 6 4 36 36 H 1.09006 * 109.46853 * 60.00058 * 8 6 4 37 37 H 1.09010 * 109.46880 * 180.02562 * 9 8 6 38 38 H 1.08997 * 109.47164 * 60.00449 * 9 8 6 39 39 H 0.96994 * 120.00103 * 265.00355 * 12 10 9 40 40 H 1.08006 * 119.80834 * 0.02562 * 16 15 13 41 41 H 1.08002 * 120.02248 * 180.25593 * 17 16 15 42 42 H 1.08995 * 109.47131 * 315.01920 * 20 19 18 43 43 H 0.96702 * 113.99814 * 180.02562 * 21 20 19 44 44 H 1.48495 * 110.00287 * 299.99688 * 22 20 19 45 45 H 1.48504 * 110.00347 * 61.32157 * 22 20 19 46 46 H 1.08001 * 125.00426 * 180.02562 * 23 19 18 47 47 H 0.97001 * 125.06952 * 180.02562 * 24 23 19 48 48 H 1.07999 * 120.16631 * 359.96261 * 26 25 24 49 49 H 1.09008 * 109.46721 * 179.97438 * 27 10 9 50 50 H 1.09003 * 109.47145 * 60.00867 * 27 10 9 51 51 H 1.08993 * 109.47231 * 300.00929 * 28 27 10 52 52 H 1.08999 * 109.47332 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.1388 -1.1672 -0.0005 5 8 1.5357 -2.2157 -0.0906 6 6 3.6417 -1.1697 0.1110 7 1 4.0615 -0.4797 -0.6211 8 6 4.0494 -0.7298 1.5186 9 6 5.5752 -0.7317 1.6315 10 6 6.1047 -2.1422 1.3645 11 1 5.6852 -2.8323 2.0966 12 7 7.5656 -2.1441 1.4733 13 6 8.1515 -2.2919 2.6781 14 8 7.4674 -2.4232 3.6748 15 6 9.6231 -2.2944 2.7877 16 6 10.4085 -2.1485 1.6355 17 6 11.7679 -2.1447 1.7243 18 6 12.3870 -2.2969 2.9693 19 6 13.7814 -2.3416 3.4087 20 6 15.0013 -2.2212 2.5321 21 8 15.1725 -0.8582 2.1387 22 14 16.5033 -2.7880 3.4773 23 6 13.7687 -2.5093 4.7427 24 7 12.4811 -2.5761 5.1926 25 6 11.6079 -2.4494 4.1337 26 6 10.2250 -2.4473 4.0348 27 6 5.6969 -2.5819 -0.0430 28 6 4.1711 -2.5802 -0.1560 29 1 -0.3635 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5138 -0.8900 32 1 2.4827 1.5235 -1.0207 33 1 1.5618 2.0552 0.4067 34 1 3.0928 1.1713 0.6140 35 1 3.6725 0.2751 1.7087 36 1 3.6296 -1.4198 2.2507 37 1 5.8656 -0.4188 2.6345 38 1 5.9946 -0.0416 0.8995 39 1 8.1113 -2.0390 0.6783 40 1 9.9330 -2.0344 0.6725 41 1 12.3673 -2.0277 0.8335 42 1 14.8743 -2.8422 1.6455 43 1 15.9405 -0.7061 1.5711 44 1 16.6875 -1.9492 4.6887 45 1 16.3516 -4.2135 3.8649 46 1 14.6475 -2.5806 5.3665 47 1 12.2199 -2.6942 6.1192 48 1 9.6174 -2.5638 4.9200 49 1 6.0745 -3.5866 -0.2334 50 1 6.1164 -1.8918 -0.7751 51 1 3.7517 -3.2702 0.5761 52 1 3.8807 -2.8930 -1.1589 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_12335838.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:58:48 Heat of formation + Delta-G solvation = -39.301134 kcal Electronic energy + Delta-G solvation = -33297.899017 eV Core-core repulsion = 28843.177068 eV Total energy + Delta-G solvation = -4454.721948 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.188 amu Computer time = 1.23 seconds Orbital eigenvalues (eV) -42.55853 -41.62861 -40.88194 -38.82537 -37.79099 -37.45996 -36.65222 -35.36756 -33.42312 -31.96041 -31.70498 -30.83292 -30.20688 -28.72913 -27.19368 -26.45155 -25.11959 -23.86881 -23.68045 -23.40195 -21.51421 -21.19844 -20.64474 -20.14273 -19.29509 -18.45203 -18.22986 -18.00396 -17.67205 -17.19977 -17.10894 -16.75389 -16.19747 -16.06997 -15.72184 -15.46529 -15.25998 -15.11107 -15.05418 -14.98461 -14.83009 -14.79514 -14.64055 -14.27074 -13.95058 -13.82975 -13.61054 -13.51939 -13.33951 -13.25602 -13.15050 -12.74950 -12.71449 -12.63198 -12.57185 -12.31754 -12.14917 -12.10327 -11.92380 -11.54137 -11.35917 -11.14398 -10.86522 -10.75324 -10.15302 -10.13995 -9.70151 -9.45288 -8.90119 -4.91262 -0.39914 0.32360 1.23554 1.38188 1.52034 1.71815 1.80836 1.87303 2.01839 2.02987 2.18232 2.82270 3.40157 3.49490 3.56457 3.61791 3.61883 3.67663 3.75059 3.96579 4.05197 4.07288 4.09542 4.16223 4.21721 4.23551 4.30495 4.31819 4.36118 4.43993 4.44439 4.46253 4.46899 4.52200 4.59820 4.70541 4.74842 4.79877 4.86169 4.89684 4.91861 4.97010 5.06135 5.13750 5.15135 5.17813 5.26465 5.30355 5.35662 5.40391 5.47718 5.49716 5.52704 5.90016 6.30023 6.36055 6.48624 7.04112 7.09495 7.14947 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.074 3.926 2 N -0.623 5.623 3 C 0.060 3.940 4 C 0.507 3.493 5 O -0.589 6.589 6 C -0.098 4.098 7 H 0.128 0.872 8 C -0.105 4.105 9 C -0.119 4.119 10 C 0.143 3.857 11 H 0.059 0.941 12 N -0.704 5.704 13 C 0.562 3.438 14 O -0.582 6.582 15 C -0.130 4.130 16 C -0.104 4.104 17 C -0.076 4.076 18 C -0.083 4.083 19 C -0.187 4.187 20 C -0.043 4.043 21 O -0.567 6.567 22 Si 0.779 3.221 23 C 0.064 3.936 24 N -0.580 5.580 25 C 0.066 3.934 26 C -0.072 4.072 27 C -0.114 4.114 28 C -0.095 4.095 29 H 0.060 0.940 30 H 0.075 0.925 31 H 0.075 0.925 32 H 0.072 0.928 33 H 0.089 0.911 34 H 0.092 0.908 35 H 0.094 0.906 36 H 0.048 0.952 37 H 0.053 0.947 38 H 0.096 0.904 39 H 0.417 0.583 40 H 0.162 0.838 41 H 0.151 0.849 42 H 0.086 0.914 43 H 0.400 0.600 44 H -0.290 1.290 45 H -0.293 1.293 46 H 0.185 0.815 47 H 0.432 0.568 48 H 0.127 0.873 49 H 0.078 0.922 50 H 0.101 0.899 51 H 0.048 0.952 52 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 7.514 5.314 -5.728 10.840 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 N -0.356 5.356 3 C -0.081 4.081 4 C 0.297 3.703 5 O -0.470 6.470 6 C -0.118 4.118 7 H 0.146 0.854 8 C -0.143 4.143 9 C -0.158 4.158 10 C 0.038 3.962 11 H 0.078 0.922 12 N -0.355 5.355 13 C 0.351 3.649 14 O -0.464 6.464 15 C -0.134 4.134 16 C -0.123 4.123 17 C -0.094 4.094 18 C -0.088 4.088 19 C -0.195 4.195 20 C -0.153 4.153 21 O -0.377 6.377 22 Si 0.684 3.316 23 C -0.065 4.065 24 N -0.184 5.184 25 C -0.040 4.040 26 C -0.093 4.093 27 C -0.152 4.152 28 C -0.134 4.134 29 H 0.079 0.921 30 H 0.094 0.906 31 H 0.093 0.907 32 H 0.091 0.909 33 H 0.107 0.893 34 H 0.110 0.890 35 H 0.113 0.887 36 H 0.067 0.933 37 H 0.072 0.928 38 H 0.114 0.886 39 H 0.256 0.744 40 H 0.180 0.820 41 H 0.168 0.832 42 H 0.104 0.896 43 H 0.251 0.749 44 H -0.217 1.217 45 H -0.220 1.220 46 H 0.201 0.799 47 H 0.272 0.728 48 H 0.145 0.855 49 H 0.097 0.903 50 H 0.120 0.880 51 H 0.067 0.933 52 H 0.090 0.910 Dipole moment (debyes) X Y Z Total from point charges 6.430 4.441 -3.857 8.715 hybrid contribution -0.926 -0.287 0.745 1.223 sum 5.503 4.154 -3.112 7.565 Atomic orbital electron populations 1.21766 0.79241 1.03070 1.02824 1.47922 1.07569 1.07198 1.72889 1.22310 0.98286 0.83894 1.03618 1.21306 0.91343 0.82948 0.74736 1.90682 1.71458 1.33097 1.51727 1.21387 0.89510 1.00509 1.00440 0.85445 1.21563 0.96002 1.02618 0.94138 1.21844 0.94530 0.96773 1.02606 1.21034 0.79023 0.97551 0.98551 0.92234 1.45803 1.07691 1.73124 1.08922 1.18332 0.87653 0.75437 0.83490 1.90775 1.65964 1.51706 1.37929 1.19524 0.92169 1.07525 0.94187 1.20987 0.93245 1.00245 0.97872 1.20476 0.94450 0.98288 0.96191 1.19559 0.92491 1.03151 0.93606 1.20103 0.92940 1.13239 0.93201 1.24148 1.01324 0.87635 1.02192 1.86482 1.53789 1.24682 1.72701 0.94060 0.81541 0.75532 0.80502 1.21995 0.87441 1.01919 0.95099 1.41728 1.04253 1.62868 1.09511 1.18210 0.91420 1.06130 0.88284 1.20121 0.90513 1.00355 0.98318 1.21751 0.95016 1.03475 0.94912 1.21247 0.94844 0.94852 1.02422 0.92104 0.90650 0.90680 0.90910 0.89251 0.89016 0.88747 0.93349 0.92805 0.88564 0.74450 0.82044 0.83155 0.89618 0.74905 1.21745 1.21980 0.79867 0.72791 0.85548 0.90341 0.88043 0.93277 0.90971 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.07 0.04 10.65 127.77 1.36 1.40 16 2 N -0.62 -0.48 3.27 -871.89 -2.85 -3.33 16 3 C 0.06 -0.45 9.89 127.77 1.26 0.82 16 4 C 0.51 2.90 6.94 87.66 0.61 3.51 16 5 O -0.59 -9.06 15.32 -3.05 -0.05 -9.10 16 6 C -0.10 0.13 1.71 -11.54 -0.02 0.11 16 7 H 0.13 -0.93 7.68 -2.38 -0.02 -0.95 16 8 C -0.11 0.17 4.90 30.59 0.15 0.32 16 9 C -0.12 0.23 5.49 30.59 0.17 0.40 16 10 C 0.14 0.00 2.45 44.99 0.11 0.11 16 11 H 0.06 0.42 7.58 -2.39 -0.02 0.40 16 12 N -0.70 0.55 5.03 -445.65 -2.24 -1.69 16 13 C 0.56 3.94 7.72 86.71 0.67 4.61 16 14 O -0.58 -9.14 15.97 -4.00 -0.06 -9.21 16 15 C -0.13 -0.68 5.87 -20.08 -0.12 -0.79 16 16 C -0.10 0.03 9.46 22.28 0.21 0.24 16 17 C -0.08 -0.13 10.03 22.20 0.22 0.09 16 18 C -0.08 -0.51 6.35 -20.14 -0.13 -0.64 16 19 C -0.19 -0.85 5.60 -18.64 -0.10 -0.96 16 20 C -0.04 0.06 3.05 71.24 0.22 0.28 16 21 O -0.57 0.57 12.86 -148.98 -1.92 -1.34 16 22 Si 0.78 -3.29 30.79 68.60 2.11 -1.18 16 23 C 0.06 0.19 10.43 83.09 0.87 1.06 16 24 N -0.58 -1.60 6.06 -187.71 -1.14 -2.74 16 25 C 0.07 0.44 7.26 38.96 0.28 0.72 16 26 C -0.07 -0.54 9.61 22.63 0.22 -0.32 16 27 C -0.11 0.50 5.39 30.59 0.16 0.66 16 28 C -0.10 -0.06 4.55 30.60 0.14 0.08 16 29 H 0.06 0.38 6.91 -2.38 -0.02 0.36 16 30 H 0.07 -0.20 8.14 -2.39 -0.02 -0.21 16 31 H 0.07 -0.19 8.14 -2.39 -0.02 -0.21 16 32 H 0.07 -0.69 8.14 -2.39 -0.02 -0.71 16 33 H 0.09 -0.86 8.02 -2.39 -0.02 -0.88 16 34 H 0.09 -0.88 4.36 -2.39 -0.01 -0.89 16 35 H 0.09 -0.47 5.45 -2.39 -0.01 -0.49 16 36 H 0.05 0.18 8.14 -2.38 -0.02 0.16 16 37 H 0.05 0.17 8.14 -2.38 -0.02 0.15 16 38 H 0.10 -0.67 8.14 -2.39 -0.02 -0.69 16 39 H 0.42 -3.18 6.59 -92.71 -0.61 -3.79 16 40 H 0.16 -1.34 6.36 -2.91 -0.02 -1.36 16 41 H 0.15 -0.42 8.06 -2.91 -0.02 -0.44 16 42 H 0.09 -0.41 7.96 -2.39 -0.02 -0.43 16 43 H 0.40 -4.70 8.74 -74.06 -0.65 -5.35 16 44 H -0.29 -0.50 7.04 99.48 0.70 0.20 16 45 H -0.29 -0.52 7.11 99.48 0.71 0.19 16 46 H 0.18 -0.22 6.30 -2.91 -0.02 -0.24 16 47 H 0.43 -1.23 8.96 -92.71 -0.83 -2.06 16 48 H 0.13 1.06 7.62 -2.91 -0.02 1.04 16 49 H 0.08 -0.33 8.14 -2.38 -0.02 -0.34 16 50 H 0.10 -0.98 8.14 -2.39 -0.02 -1.00 16 51 H 0.05 0.31 7.99 -2.39 -0.02 0.29 16 52 H 0.07 0.11 8.14 -2.39 -0.02 0.09 16 Total: 0.00 -33.10 412.69 -0.94 -34.03 By element: Atomic # 1 Polarization: -16.07 SS G_CDS: -1.07 Total: -17.15 kcal Atomic # 6 Polarization: 5.42 SS G_CDS: 6.28 Total: 11.71 kcal Atomic # 7 Polarization: -1.53 SS G_CDS: -6.23 Total: -7.76 kcal Atomic # 8 Polarization: -17.63 SS G_CDS: -2.03 Total: -19.65 kcal Atomic # 14 Polarization: -3.29 SS G_CDS: 2.11 Total: -1.18 kcal Total: -33.10 -0.94 -34.03 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_12335838.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -5.267 kcal (2) G-P(sol) polarization free energy of solvation -33.097 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.364 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.938 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -34.035 kcal (6) G-S(sol) free energy of system = (1) + (5) -39.301 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.23 seconds