Wall clock time and date at job start Sun Mar 7 2021 08:59:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.46497 * 120.00389 * 2 1 4 4 C 1.34780 * 119.99655 * 180.02562 * 2 1 3 5 5 O 1.21283 * 120.00304 * 359.97438 * 4 2 1 6 6 C 1.50701 * 119.99929 * 180.02562 * 4 2 1 7 7 H 1.09005 * 109.47155 * 59.99903 * 6 4 2 8 8 C 1.52998 * 109.47157 * 179.97438 * 6 4 2 9 9 C 1.53002 * 109.47017 * 179.97438 * 8 6 4 10 10 C 1.53000 * 109.47035 * 300.00048 * 9 8 6 11 11 H 1.09005 * 109.47267 * 300.00132 * 10 9 8 12 12 N 1.46493 * 109.47146 * 180.02562 * 10 9 8 13 13 C 1.34778 * 120.00217 * 155.00160 * 12 10 9 14 14 O 1.21567 * 120.00107 * 359.97438 * 13 12 10 15 15 C 1.47729 * 120.00176 * 179.97438 * 13 12 10 16 16 C 1.39624 * 120.11858 * 179.97438 * 15 13 12 17 17 C 1.37865 * 119.87988 * 180.02562 * 16 15 13 18 18 C 1.50699 * 119.94228 * 179.97438 * 17 16 15 19 19 O 1.42899 * 109.47207 * 254.98363 * 18 17 16 20 20 Si 1.86291 * 109.46909 * 134.98108 * 18 17 16 21 21 C 1.38628 * 120.11611 * 359.97438 * 17 16 15 22 22 F 1.35095 * 119.88081 * 180.26898 * 21 17 16 23 23 C 1.38685 * 120.24077 * 359.97438 * 21 17 16 24 24 C 1.37804 * 120.11875 * 0.02562 * 23 21 17 25 25 C 1.52998 * 109.47257 * 60.00099 * 10 9 8 26 26 C 1.53000 * 109.46941 * 299.99816 * 6 4 2 27 27 H 1.09001 * 109.47041 * 270.00419 * 1 2 3 28 28 H 1.08999 * 109.46760 * 30.00012 * 1 2 3 29 29 H 1.08996 * 109.47401 * 149.99893 * 1 2 3 30 30 H 1.09003 * 109.47144 * 270.00153 * 3 2 1 31 31 H 1.08998 * 109.47087 * 29.99827 * 3 2 1 32 32 H 1.08996 * 109.47336 * 149.99855 * 3 2 1 33 33 H 1.09000 * 109.47002 * 59.99564 * 8 6 4 34 34 H 1.08994 * 109.47053 * 299.99673 * 8 6 4 35 35 H 1.09002 * 109.46690 * 180.02562 * 9 8 6 36 36 H 1.08993 * 109.47205 * 59.99788 * 9 8 6 37 37 H 0.97006 * 120.00154 * 334.99332 * 12 10 9 38 38 H 1.08003 * 120.06119 * 0.02562 * 16 15 13 39 39 H 1.09005 * 109.46450 * 14.98554 * 18 17 16 40 40 H 0.96698 * 113.99799 * 299.99582 * 19 18 17 41 41 H 1.48503 * 110.00278 * 58.68250 * 20 18 17 42 42 H 1.48498 * 110.00111 * 180.02562 * 20 18 17 43 43 H 1.08006 * 119.93841 * 179.97438 * 23 21 17 44 44 H 1.08000 * 120.06355 * 179.97438 * 24 23 21 45 45 H 1.08993 * 109.47306 * 60.00062 * 25 10 9 46 46 H 1.09003 * 109.46836 * 180.02562 * 25 10 9 47 47 H 1.09000 * 109.46854 * 300.00213 * 26 6 4 48 48 H 1.09005 * 109.47345 * 59.99809 * 26 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.1388 -1.1673 -0.0005 5 8 1.5324 -2.2176 -0.0005 6 6 3.6459 -1.1673 0.0001 7 1 4.0089 -0.6541 0.8906 8 6 4.1558 -2.6098 -0.0001 9 6 5.6858 -2.6099 -0.0001 10 6 6.1958 -1.8885 -1.2493 11 1 5.8324 -2.4023 -2.1394 12 7 7.6607 -1.8891 -1.2497 13 6 8.3344 -1.7873 -2.4126 14 8 7.7264 -1.6955 -3.4613 15 6 9.8117 -1.7873 -2.4129 16 6 10.5120 -1.6825 -3.6163 17 6 11.8907 -1.6836 -3.6109 18 6 12.6480 -1.5711 -4.9089 19 8 13.1886 -2.8473 -5.2570 20 14 14.0339 -0.3415 -4.7147 21 6 12.5815 -1.7878 -2.4135 22 9 13.9324 -1.7829 -2.4133 23 6 11.8908 -1.8911 -1.2154 24 6 10.5128 -1.8910 -1.2093 25 6 5.6858 -0.4460 -1.2492 26 6 4.1563 -0.4453 -1.2485 27 1 -0.3633 0.0001 1.0277 28 1 -0.3633 0.8900 -0.5138 29 1 -0.3634 -0.8899 -0.5138 30 1 2.3793 1.5833 -1.0277 31 1 1.6086 2.0283 0.5138 32 1 3.1500 1.1383 0.5138 33 1 3.7927 -3.1235 -0.8903 34 1 3.7922 -3.1238 0.8896 35 1 6.0491 -3.6376 -0.0007 36 1 6.0492 -2.0961 0.8898 37 1 8.1459 -1.9626 -0.4130 38 1 9.9747 -1.6008 -4.5496 39 1 11.9723 -1.2358 -5.6958 40 1 13.8000 -3.2078 -4.6003 41 1 14.9446 -0.7709 -3.6231 42 1 14.7882 -0.2210 -5.9881 43 1 12.4340 -1.9725 -0.2854 44 1 9.9758 -1.9719 -0.2758 45 1 6.0492 0.0677 -0.3593 46 1 6.0488 0.0677 -2.1394 47 1 3.7932 -0.9586 -2.1389 48 1 3.7930 0.5824 -1.2481 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_12496548.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:59:37 Heat of formation + Delta-G solvation = -107.027757 kcal Electronic energy + Delta-G solvation = -31052.047238 eV Core-core repulsion = 26602.350278 eV Total energy + Delta-G solvation = -4449.696960 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 351.168 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -50.46251 -41.72597 -41.19710 -39.86410 -38.57836 -37.79242 -36.68922 -35.39939 -33.03880 -32.20209 -31.85048 -30.76507 -28.72859 -27.27397 -26.95495 -25.23834 -23.76761 -23.56979 -23.33387 -21.48772 -21.16123 -20.18007 -19.23798 -18.85199 -18.15001 -17.93220 -17.86411 -17.29305 -17.13039 -16.96868 -16.77990 -16.24789 -16.06844 -15.71794 -15.56711 -15.12894 -15.04219 -15.00730 -14.89495 -14.66226 -14.34453 -13.98969 -13.87170 -13.86157 -13.64580 -13.56378 -13.40414 -13.26581 -13.11902 -12.95410 -12.71076 -12.58434 -12.35507 -12.28712 -12.08174 -11.49981 -11.34159 -11.31522 -11.18185 -10.87607 -10.72903 -10.19097 -10.09757 -9.79837 -9.70047 -4.97278 -0.49743 0.03752 1.19796 1.55785 1.57726 1.60505 1.93617 2.00312 2.08843 2.58294 2.98501 3.23582 3.42454 3.45616 3.56235 3.61629 3.66214 3.66951 3.98090 4.03068 4.12075 4.13137 4.15149 4.30505 4.33005 4.34519 4.41020 4.44861 4.46541 4.49305 4.64545 4.65095 4.74113 4.78378 4.82267 4.87969 4.90508 4.92252 4.98725 5.02244 5.09408 5.11343 5.17086 5.17828 5.30463 5.33078 5.46480 5.50192 5.61847 6.30361 6.32289 6.49006 7.11646 7.16038 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.079 3.921 2 N -0.623 5.623 3 C 0.065 3.935 4 C 0.505 3.495 5 O -0.591 6.591 6 C -0.097 4.097 7 H 0.130 0.870 8 C -0.095 4.095 9 C -0.114 4.114 10 C 0.143 3.857 11 H 0.059 0.941 12 N -0.704 5.704 13 C 0.560 3.440 14 O -0.577 6.577 15 C -0.152 4.152 16 C -0.023 4.023 17 C -0.156 4.156 18 C -0.085 4.085 19 O -0.544 6.544 20 Si 0.752 3.248 21 C 0.108 3.892 22 F -0.131 7.131 23 C -0.147 4.147 24 C -0.038 4.038 25 C -0.118 4.118 26 C -0.113 4.113 27 H 0.058 0.942 28 H 0.094 0.906 29 H 0.052 0.948 30 H 0.071 0.929 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.046 0.954 34 H 0.069 0.931 35 H 0.077 0.923 36 H 0.102 0.898 37 H 0.417 0.583 38 H 0.138 0.862 39 H 0.129 0.871 40 H 0.384 0.616 41 H -0.252 1.252 42 H -0.308 1.308 43 H 0.172 0.828 44 H 0.177 0.823 45 H 0.097 0.903 46 H 0.057 0.943 47 H 0.046 0.954 48 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.295 7.303 8.385 11.194 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.355 5.355 3 C -0.076 4.076 4 C 0.294 3.706 5 O -0.471 6.471 6 C -0.118 4.118 7 H 0.148 0.852 8 C -0.134 4.134 9 C -0.152 4.152 10 C 0.038 3.962 11 H 0.077 0.923 12 N -0.356 5.356 13 C 0.348 3.652 14 O -0.457 6.457 15 C -0.155 4.155 16 C -0.042 4.042 17 C -0.157 4.157 18 C -0.193 4.193 19 O -0.352 6.352 20 Si 0.656 3.344 21 C 0.088 3.912 22 F -0.109 7.109 23 C -0.165 4.165 24 C -0.057 4.057 25 C -0.157 4.157 26 C -0.152 4.152 27 H 0.077 0.923 28 H 0.113 0.887 29 H 0.071 0.929 30 H 0.090 0.910 31 H 0.107 0.893 32 H 0.113 0.887 33 H 0.065 0.935 34 H 0.088 0.912 35 H 0.095 0.905 36 H 0.120 0.880 37 H 0.256 0.744 38 H 0.155 0.845 39 H 0.147 0.853 40 H 0.233 0.767 41 H -0.177 1.177 42 H -0.237 1.237 43 H 0.190 0.810 44 H 0.194 0.806 45 H 0.115 0.885 46 H 0.076 0.924 47 H 0.065 0.935 48 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 1.047 7.059 7.131 10.088 hybrid contribution 0.386 -1.512 -0.107 1.564 sum 1.434 5.547 7.025 9.065 Atomic orbital electron populations 1.21718 0.79218 1.03246 1.02201 1.47955 1.07537 1.07243 1.72803 1.22294 0.98230 0.83911 1.03190 1.21370 0.91502 0.82903 0.74786 1.90689 1.71572 1.32982 1.51884 1.21381 0.89042 0.99177 1.02190 0.85242 1.21239 0.95050 0.94629 1.02486 1.21751 0.94380 1.01642 0.97415 1.21032 0.78723 0.97038 0.99387 0.92268 1.45812 1.07204 1.73668 1.08931 1.18360 0.87332 0.75643 0.83864 1.90806 1.70582 1.51321 1.33005 1.19997 0.92563 1.07910 0.95040 1.21015 0.91822 0.92644 0.98686 1.20130 0.94720 1.06240 0.94622 1.25185 1.05301 0.92504 0.96309 1.86624 1.64671 1.33852 1.50065 0.94639 0.77442 0.84636 0.77707 1.18129 0.76825 1.01200 0.95017 1.91554 1.29058 1.93436 1.96881 1.21416 0.94978 1.02530 0.97562 1.21529 0.93246 0.93029 0.97870 1.21825 0.94435 0.95894 1.03514 1.21718 0.95773 1.02108 0.95558 0.92310 0.88718 0.92930 0.91044 0.89340 0.88705 0.93510 0.91222 0.90474 0.87993 0.74410 0.84461 0.85336 0.76744 1.17674 1.23662 0.81037 0.80584 0.88500 0.92449 0.93532 0.88122 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.04 10.44 127.77 1.33 1.29 16 2 N -0.62 0.36 3.27 -871.89 -2.85 -2.49 16 3 C 0.07 -0.59 8.80 127.77 1.12 0.53 16 4 C 0.50 2.21 7.08 87.66 0.62 2.83 16 5 O -0.59 -8.49 15.56 -3.04 -0.05 -8.54 16 6 C -0.10 0.32 1.72 -11.54 -0.02 0.30 16 7 H 0.13 -1.20 7.40 -2.38 -0.02 -1.21 16 8 C -0.10 0.10 4.49 30.59 0.14 0.23 16 9 C -0.11 0.78 5.39 30.60 0.16 0.95 16 10 C 0.14 -0.48 2.45 44.99 0.11 -0.37 16 11 H 0.06 0.23 7.58 -2.38 -0.02 0.21 16 12 N -0.70 3.87 5.03 -445.53 -2.24 1.63 16 13 C 0.56 0.93 7.73 86.75 0.67 1.60 16 14 O -0.58 -6.42 16.01 -3.93 -0.06 -6.49 16 15 C -0.15 0.26 5.87 -20.09 -0.12 0.14 16 16 C -0.02 -0.03 9.21 22.52 0.21 0.18 16 17 C -0.16 -0.01 4.78 -19.86 -0.09 -0.10 16 18 C -0.08 -0.10 2.81 71.24 0.20 0.10 16 19 O -0.54 -2.70 12.88 -148.98 -1.92 -4.62 16 20 Si 0.75 0.11 30.81 68.60 2.11 2.23 16 21 C 0.11 -0.19 6.63 22.47 0.15 -0.04 16 22 F -0.13 -0.10 12.57 44.97 0.57 0.47 16 23 C -0.15 1.01 10.01 22.27 0.22 1.23 16 24 C -0.04 0.32 9.54 22.51 0.21 0.54 16 25 C -0.12 0.64 5.49 30.58 0.17 0.81 16 26 C -0.11 0.50 4.84 30.58 0.15 0.65 16 27 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 28 H 0.09 -0.54 8.07 -2.39 -0.02 -0.56 16 29 H 0.05 0.25 7.42 -2.39 -0.02 0.23 16 30 H 0.07 -0.73 6.95 -2.39 -0.02 -0.75 16 31 H 0.09 -1.02 8.07 -2.39 -0.02 -1.04 16 32 H 0.09 -1.19 6.01 -2.39 -0.01 -1.21 16 33 H 0.05 0.22 8.10 -2.39 -0.02 0.20 16 34 H 0.07 0.06 8.10 -2.39 -0.02 0.04 16 35 H 0.08 -0.50 8.14 -2.39 -0.02 -0.52 16 36 H 0.10 -1.26 8.14 -2.39 -0.02 -1.28 16 37 H 0.42 -5.43 6.63 -92.70 -0.61 -6.04 16 38 H 0.14 0.43 7.58 -2.91 -0.02 0.40 16 39 H 0.13 -0.04 7.77 -2.38 -0.02 -0.06 16 40 H 0.38 -0.08 8.42 -74.06 -0.62 -0.71 16 41 H -0.25 -0.85 5.27 99.48 0.52 -0.33 16 42 H -0.31 -2.48 7.11 99.48 0.71 -1.77 16 43 H 0.17 -2.03 8.06 -2.91 -0.02 -2.06 16 44 H 0.18 -2.92 6.40 -2.91 -0.02 -2.94 16 45 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 46 H 0.06 -0.05 8.14 -2.39 -0.02 -0.07 16 47 H 0.05 0.05 8.14 -2.39 -0.02 0.03 16 48 H 0.10 -0.81 4.53 -2.38 -0.01 -0.83 16 Total: 0.00 -28.72 381.72 0.41 -28.31 By element: Atomic # 1 Polarization: -21.00 SS G_CDS: -0.38 Total: -21.38 kcal Atomic # 6 Polarization: 5.64 SS G_CDS: 5.24 Total: 10.88 kcal Atomic # 7 Polarization: 4.23 SS G_CDS: -5.09 Total: -0.86 kcal Atomic # 8 Polarization: -17.61 SS G_CDS: -2.03 Total: -19.64 kcal Atomic # 9 Polarization: -0.10 SS G_CDS: 0.57 Total: 0.47 kcal Atomic # 14 Polarization: 0.11 SS G_CDS: 2.11 Total: 2.23 kcal Total: -28.72 0.41 -28.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_12496548.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -78.721 kcal (2) G-P(sol) polarization free energy of solvation -28.721 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -107.442 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.415 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -107.028 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds