Wall clock time and date at job start Sun Mar 7 2021 09:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46500 * 1 3 3 C 1.46497 * 120.00019 * 2 1 4 4 C 1.34778 * 119.99718 * 180.02562 * 2 1 3 5 5 O 1.21285 * 120.00153 * 359.97438 * 4 2 1 6 6 C 1.50695 * 119.99824 * 179.97438 * 4 2 1 7 7 H 1.08996 * 109.47649 * 59.99737 * 6 4 2 8 8 C 1.53004 * 109.47249 * 180.02562 * 6 4 2 9 9 C 1.53003 * 109.47327 * 180.02562 * 8 6 4 10 10 C 1.53001 * 109.46890 * 299.99863 * 9 8 6 11 11 H 1.09001 * 109.47180 * 300.00153 * 10 9 8 12 12 N 1.46496 * 109.47160 * 180.02562 * 10 9 8 13 13 C 1.34770 * 120.00639 * 154.99853 * 12 10 9 14 14 O 1.21582 * 119.99551 * 0.02562 * 13 12 10 15 15 C 1.47649 * 120.00584 * 179.97438 * 13 12 10 16 16 C 1.40174 * 119.97220 * 0.02562 * 15 13 12 17 17 C 1.36350 * 120.66993 * 179.97438 * 16 15 13 18 18 C 1.39329 * 120.23473 * 0.02562 * 17 16 15 19 19 N 1.37409 * 133.25171 * 180.02562 * 18 17 16 20 20 C 1.36861 * 109.98141 * 179.97438 * 19 18 17 21 21 C 1.34194 * 109.96749 * 359.97438 * 20 19 18 22 22 C 1.50698 * 126.54084 * 179.73696 * 21 20 19 23 23 O 1.42906 * 109.47059 * 105.02437 * 22 21 20 24 24 Si 1.86308 * 109.47232 * 345.03006 * 22 21 20 25 25 C 1.40909 * 119.64502 * 359.97438 * 18 17 16 26 26 C 1.39193 * 119.97541 * 179.97438 * 15 13 12 27 27 C 1.53003 * 109.47397 * 59.99931 * 10 9 8 28 28 C 1.53003 * 109.47157 * 299.99906 * 27 10 9 29 29 H 1.09008 * 109.46821 * 239.99540 * 1 2 3 30 30 H 1.09006 * 109.47003 * 359.97438 * 1 2 3 31 31 H 1.09001 * 109.47566 * 119.99189 * 1 2 3 32 32 H 1.08995 * 109.47557 * 270.00053 * 3 2 1 33 33 H 1.08999 * 109.47073 * 30.01042 * 3 2 1 34 34 H 1.09009 * 109.46666 * 150.00145 * 3 2 1 35 35 H 1.09001 * 109.46977 * 59.99795 * 8 6 4 36 36 H 1.09008 * 109.46888 * 299.99764 * 8 6 4 37 37 H 1.08993 * 109.46928 * 180.02562 * 9 8 6 38 38 H 1.08995 * 109.46956 * 59.99775 * 9 8 6 39 39 H 0.97001 * 119.99760 * 334.99623 * 12 10 9 40 40 H 1.07998 * 119.66399 * 359.95459 * 16 15 13 41 41 H 1.07998 * 119.88310 * 180.02562 * 17 16 15 42 42 H 0.96996 * 125.00927 * 0.02562 * 19 18 17 43 43 H 1.08002 * 125.01620 * 179.97438 * 20 19 18 44 44 H 1.08998 * 109.47761 * 225.02604 * 22 21 20 45 45 H 0.96698 * 114.00358 * 300.00605 * 23 22 21 46 46 H 1.48494 * 110.00016 * 58.67505 * 24 22 21 47 47 H 1.48495 * 109.99925 * 179.97438 * 24 22 21 48 48 H 1.07998 * 120.30377 * 0.02562 * 26 15 13 49 49 H 1.09001 * 109.46775 * 59.99974 * 27 10 9 50 50 H 1.08995 * 109.47019 * 180.02562 * 27 10 9 51 51 H 1.08995 * 109.47205 * 300.00615 * 28 27 10 52 52 H 1.08993 * 109.46928 * 179.97438 * 28 27 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.1388 -1.1672 -0.0005 5 8 1.5324 -2.2176 -0.0005 6 6 3.6458 -1.1673 -0.0011 7 1 4.0096 -0.6536 0.8888 8 6 4.1558 -2.6098 -0.0023 9 6 5.6858 -2.6099 -0.0022 10 6 6.1958 -1.8876 -1.2509 11 1 5.8325 -2.4007 -2.1413 12 7 7.6608 -1.8882 -1.2512 13 6 8.3346 -1.7856 -2.4139 14 8 7.7265 -1.6922 -3.4626 15 6 9.8111 -1.7856 -2.4141 16 6 10.5115 -1.8928 -1.2047 17 6 11.8749 -1.8948 -1.1885 18 6 12.5909 -1.7893 -2.3791 19 7 13.9333 -1.7643 -2.6714 20 6 14.1156 -1.6446 -4.0225 21 6 12.9265 -1.5894 -4.6422 22 6 12.6928 -1.4524 -6.1246 23 8 12.2764 -2.7105 -6.6595 24 14 14.2720 -0.9167 -6.9554 25 6 11.8985 -1.6809 -3.6015 26 6 10.5063 -1.6802 -3.6154 27 6 5.6859 -0.4451 -1.2498 28 6 4.1558 -0.4450 -1.2499 29 1 -0.3633 -0.5139 0.8900 30 1 -0.3633 1.0277 0.0005 31 1 -0.3634 -0.5137 -0.8900 32 1 2.3792 1.5834 -1.0276 33 1 1.6085 2.0283 0.5140 34 1 3.1500 1.1383 0.5139 35 1 3.7921 -3.1230 -0.8925 36 1 3.7928 -3.1242 0.8876 37 1 6.0491 -3.6375 -0.0035 38 1 6.0491 -2.0968 0.8881 39 1 8.1459 -1.9623 -0.4145 40 1 9.9658 -1.9744 -0.2764 41 1 12.4017 -1.9784 -0.2494 42 1 14.6466 -1.8235 -2.0168 43 1 15.0747 -1.6010 -4.5170 44 1 11.9176 -0.7073 -6.3030 45 1 12.9192 -3.4224 -6.5365 46 1 15.3456 -1.9085 -6.6932 47 1 14.0550 -0.7786 -8.4179 48 1 9.9707 -1.5978 -4.5496 49 1 6.0492 0.0680 -0.3594 50 1 6.0488 0.0692 -2.1396 51 1 3.7925 -0.9582 -2.1401 52 1 3.7926 0.5826 -1.2486 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_13287722.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:22 Heat of formation + Delta-G solvation = -41.631850 kcal Electronic energy + Delta-G solvation = -33491.371874 eV Core-core repulsion = 29036.548858 eV Total energy + Delta-G solvation = -4454.823016 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.188 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.45050 -41.61946 -40.82871 -38.78138 -38.01383 -37.42462 -36.71341 -35.32845 -33.27677 -31.95382 -31.68230 -30.66837 -30.10998 -28.70452 -27.22546 -26.48712 -25.12630 -23.79060 -23.47532 -23.37871 -21.50316 -21.29731 -20.72992 -20.18646 -19.33180 -18.51038 -17.93696 -17.68992 -17.50167 -17.17259 -16.94218 -16.79401 -16.26421 -16.07328 -15.86103 -15.64870 -15.26308 -15.14721 -15.03946 -14.88418 -14.79332 -14.75345 -14.38186 -14.11210 -13.84999 -13.72696 -13.66484 -13.58428 -13.54199 -13.40204 -13.16625 -12.69512 -12.60624 -12.56825 -12.51555 -12.30498 -12.12249 -12.10252 -11.79418 -11.52257 -11.33243 -11.07702 -10.79274 -10.74792 -10.47954 -10.11792 -9.72701 -9.31169 -8.80132 -4.87077 -0.13618 0.22576 1.35362 1.52437 1.53994 1.61470 1.86730 2.00914 2.02321 2.11176 2.14786 2.90747 3.42739 3.52256 3.57671 3.63737 3.65091 3.77039 3.85846 3.91915 4.00298 4.11148 4.12446 4.16733 4.29508 4.31789 4.38190 4.38815 4.41570 4.44466 4.46723 4.48008 4.57004 4.61186 4.64418 4.71524 4.80193 4.81735 4.85346 4.88353 4.98523 5.02701 5.06368 5.13740 5.14977 5.27507 5.28786 5.32588 5.37874 5.45980 5.47969 5.54455 5.59171 6.00174 6.30595 6.54782 6.56412 6.62526 7.09944 7.22796 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.084 3.916 2 N -0.622 5.622 3 C 0.064 3.936 4 C 0.505 3.495 5 O -0.589 6.589 6 C -0.097 4.097 7 H 0.131 0.869 8 C -0.095 4.095 9 C -0.113 4.113 10 C 0.142 3.858 11 H 0.055 0.945 12 N -0.706 5.706 13 C 0.560 3.440 14 O -0.589 6.589 15 C -0.178 4.178 16 C -0.066 4.066 17 C -0.125 4.125 18 C 0.111 3.889 19 N -0.571 5.571 20 C 0.081 3.919 21 C -0.218 4.218 22 C -0.063 4.063 23 O -0.558 6.558 24 Si 0.789 3.211 25 C -0.127 4.127 26 C -0.023 4.023 27 C -0.118 4.118 28 C -0.113 4.113 29 H 0.050 0.950 30 H 0.106 0.894 31 H 0.045 0.955 32 H 0.069 0.931 33 H 0.091 0.909 34 H 0.093 0.907 35 H 0.045 0.955 36 H 0.071 0.929 37 H 0.076 0.924 38 H 0.102 0.898 39 H 0.416 0.584 40 H 0.163 0.837 41 H 0.162 0.838 42 H 0.439 0.561 43 H 0.209 0.791 44 H 0.099 0.901 45 H 0.384 0.616 46 H -0.259 1.259 47 H -0.311 1.311 48 H 0.105 0.895 49 H 0.096 0.904 50 H 0.052 0.948 51 H 0.044 0.956 52 H 0.101 0.899 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.318 7.010 9.026 14.746 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 N -0.355 5.355 3 C -0.077 4.077 4 C 0.295 3.705 5 O -0.470 6.470 6 C -0.118 4.118 7 H 0.148 0.852 8 C -0.133 4.133 9 C -0.151 4.151 10 C 0.038 3.962 11 H 0.073 0.927 12 N -0.358 5.358 13 C 0.349 3.651 14 O -0.471 6.471 15 C -0.182 4.182 16 C -0.085 4.085 17 C -0.145 4.145 18 C 0.001 3.999 19 N -0.175 5.175 20 C -0.047 4.047 21 C -0.225 4.225 22 C -0.171 4.171 23 O -0.366 6.366 24 Si 0.691 3.309 25 C -0.132 4.132 26 C -0.043 4.043 27 C -0.156 4.156 28 C -0.151 4.151 29 H 0.069 0.931 30 H 0.124 0.876 31 H 0.063 0.937 32 H 0.088 0.912 33 H 0.110 0.890 34 H 0.112 0.888 35 H 0.064 0.936 36 H 0.090 0.910 37 H 0.095 0.905 38 H 0.120 0.880 39 H 0.255 0.745 40 H 0.180 0.820 41 H 0.180 0.820 42 H 0.280 0.720 43 H 0.225 0.775 44 H 0.117 0.883 45 H 0.233 0.767 46 H -0.184 1.184 47 H -0.240 1.240 48 H 0.123 0.877 49 H 0.115 0.885 50 H 0.070 0.930 51 H 0.063 0.937 52 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges 8.758 6.688 7.665 13.424 hybrid contribution -0.528 -1.546 -0.131 1.639 sum 8.230 5.142 7.534 12.286 Atomic orbital electron populations 1.21712 0.79049 1.03907 1.01233 1.47965 1.07558 1.07198 1.72771 1.22334 0.98338 0.83903 1.03129 1.21318 0.91388 0.82909 0.74910 1.90689 1.71588 1.32977 1.51706 1.21374 0.89188 0.99127 1.02072 0.85160 1.21240 0.94901 0.94669 1.02523 1.21744 0.94491 1.01551 0.97282 1.21018 0.78933 0.96965 0.99312 0.92702 1.45781 1.07028 1.74073 1.08870 1.18502 0.87765 0.75147 0.83647 1.90771 1.70922 1.52071 1.33320 1.19591 0.91814 1.11858 0.94939 1.20898 0.93828 0.97042 0.96760 1.20073 0.93478 1.04849 0.96109 1.18647 0.84484 1.01607 0.95125 1.41759 1.05568 1.62369 1.07767 1.22163 0.99540 1.00297 0.82652 1.20755 0.92061 1.14641 0.95011 1.24780 1.12596 0.88290 0.91434 1.86600 1.48477 1.20392 1.81133 0.94107 0.72883 0.87175 0.76693 1.19174 0.92568 1.07697 0.93756 1.20595 0.92470 0.93922 0.97332 1.21829 0.94597 0.95959 1.03251 1.21720 0.95559 1.02137 0.95656 0.93085 0.87575 0.93667 0.91227 0.89024 0.88810 0.93585 0.90984 0.90541 0.87952 0.74538 0.81993 0.82019 0.71997 0.77472 0.88275 0.76715 1.18447 1.23997 0.87699 0.88508 0.92960 0.93665 0.88067 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.06 10.16 127.77 1.30 1.36 16 2 N -0.62 -0.59 3.27 -871.87 -2.85 -3.45 16 3 C 0.06 -0.49 8.77 127.77 1.12 0.63 16 4 C 0.51 3.14 7.08 87.66 0.62 3.76 16 5 O -0.59 -9.48 15.98 -3.05 -0.05 -9.53 16 6 C -0.10 0.09 1.72 -11.54 -0.02 0.07 16 7 H 0.13 -0.92 7.40 -2.39 -0.02 -0.94 16 8 C -0.09 -0.14 4.49 30.60 0.14 -0.01 16 9 C -0.11 0.40 5.39 30.60 0.16 0.56 16 10 C 0.14 0.16 2.45 44.99 0.11 0.27 16 11 H 0.05 0.48 7.58 -2.39 -0.02 0.47 16 12 N -0.71 -0.06 5.03 -445.60 -2.24 -2.30 16 13 C 0.56 4.86 7.73 86.73 0.67 5.53 16 14 O -0.59 -10.97 15.99 -3.97 -0.06 -11.04 16 15 C -0.18 -1.03 5.87 -20.09 -0.12 -1.15 16 16 C -0.07 0.17 9.46 22.30 0.21 0.38 16 17 C -0.12 0.50 10.00 22.09 0.22 0.72 16 18 C 0.11 -0.05 7.27 39.19 0.28 0.24 16 19 N -0.57 3.66 6.05 -187.47 -1.13 2.53 16 20 C 0.08 -0.43 10.43 82.99 0.87 0.44 16 21 C -0.22 -0.37 5.58 -18.61 -0.10 -0.48 16 22 C -0.06 -0.17 3.06 71.24 0.22 0.04 16 23 O -0.56 -4.04 12.88 -148.98 -1.92 -5.96 16 24 Si 0.79 -2.33 30.82 68.60 2.11 -0.22 16 25 C -0.13 -0.73 6.34 -20.21 -0.13 -0.86 16 26 C -0.02 -0.23 9.64 22.74 0.22 -0.01 16 27 C -0.12 0.16 5.50 30.60 0.17 0.32 16 28 C -0.11 0.15 4.84 30.60 0.15 0.30 16 29 H 0.05 0.15 8.14 -2.38 -0.02 0.13 16 30 H 0.11 -0.62 7.79 -2.38 -0.02 -0.64 16 31 H 0.04 0.18 8.14 -2.39 -0.02 0.16 16 32 H 0.07 -0.58 6.95 -2.39 -0.02 -0.60 16 33 H 0.09 -0.97 7.92 -2.39 -0.02 -0.99 16 34 H 0.09 -1.01 6.01 -2.38 -0.01 -1.03 16 35 H 0.05 0.33 8.10 -2.39 -0.02 0.32 16 36 H 0.07 0.20 8.10 -2.38 -0.02 0.18 16 37 H 0.08 -0.24 8.14 -2.39 -0.02 -0.26 16 38 H 0.10 -0.95 8.14 -2.39 -0.02 -0.97 16 39 H 0.42 -3.11 6.60 -92.71 -0.61 -3.73 16 40 H 0.16 -1.68 6.36 -2.91 -0.02 -1.70 16 41 H 0.16 -1.78 8.06 -2.91 -0.02 -1.80 16 42 H 0.44 -5.92 8.96 -92.71 -0.83 -6.76 16 43 H 0.21 -2.55 6.28 -2.91 -0.02 -2.57 16 44 H 0.10 0.47 7.96 -2.39 -0.02 0.45 16 45 H 0.38 0.02 8.70 -74.06 -0.64 -0.62 16 46 H -0.26 0.78 7.00 99.48 0.70 1.48 16 47 H -0.31 -1.98 7.11 99.48 0.71 -1.27 16 48 H 0.10 1.59 7.64 -2.91 -0.02 1.56 16 49 H 0.10 -0.65 8.14 -2.39 -0.02 -0.67 16 50 H 0.05 0.21 8.14 -2.39 -0.02 0.19 16 51 H 0.04 0.20 8.14 -2.39 -0.02 0.18 16 52 H 0.10 -0.54 4.53 -2.39 -0.01 -0.55 16 Total: 0.00 -36.66 411.86 -1.13 -37.80 By element: Atomic # 1 Polarization: -18.90 SS G_CDS: -1.08 Total: -19.97 kcal Atomic # 6 Polarization: 6.04 SS G_CDS: 6.09 Total: 12.13 kcal Atomic # 7 Polarization: 3.01 SS G_CDS: -6.23 Total: -3.21 kcal Atomic # 8 Polarization: -24.49 SS G_CDS: -2.03 Total: -26.52 kcal Atomic # 14 Polarization: -2.33 SS G_CDS: 2.11 Total: -0.22 kcal Total: -36.66 -1.13 -37.80 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_13287722.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -3.836 kcal (2) G-P(sol) polarization free energy of solvation -36.663 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -40.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.133 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.796 kcal (6) G-S(sol) free energy of system = (1) + (5) -41.632 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds