Wall clock time and date at job start Sun Mar 7 2021 09:00:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46497 * 1 3 3 C 1.46496 * 120.00129 * 2 1 4 4 C 1.34777 * 119.99525 * 179.97438 * 2 1 3 5 5 O 1.21283 * 120.00463 * 0.02562 * 4 2 1 6 6 C 1.50700 * 119.99675 * 179.72583 * 4 2 1 7 7 H 1.08998 * 109.47585 * 60.27844 * 6 4 2 8 8 C 1.53004 * 109.47208 * 180.27843 * 6 4 2 9 9 C 1.52997 * 109.47000 * 179.97438 * 8 6 4 10 10 C 1.52998 * 109.47441 * 299.99819 * 9 8 6 11 11 H 1.08998 * 109.47156 * 300.00035 * 10 9 8 12 12 N 1.46499 * 109.47194 * 180.02562 * 10 9 8 13 13 C 1.34769 * 120.00270 * 155.00206 * 12 10 9 14 14 O 1.21514 * 119.99829 * 359.97438 * 13 12 10 15 15 C 1.48171 * 120.00279 * 180.02562 * 13 12 10 16 16 N 1.32713 * 119.72502 * 359.97438 * 15 13 12 17 17 C 1.31521 * 121.64616 * 180.02562 * 16 15 13 18 18 C 1.38556 * 120.90474 * 359.97438 * 17 16 15 19 19 C 1.50696 * 120.32597 * 180.02562 * 18 17 16 20 20 O 1.42900 * 109.47110 * 244.99649 * 19 18 17 21 21 Si 1.86294 * 109.47156 * 4.99726 * 19 18 17 22 22 C 1.38629 * 119.34750 * 0.02562 * 18 17 16 23 23 C 1.38586 * 118.49336 * 359.72904 * 22 18 17 24 24 C 1.52996 * 109.46992 * 60.00327 * 10 9 8 25 25 C 1.52998 * 109.47092 * 300.27576 * 6 4 2 26 26 H 1.09001 * 109.47621 * 240.00596 * 1 2 3 27 27 H 1.09008 * 109.47102 * 0.02562 * 1 2 3 28 28 H 1.08995 * 109.47421 * 119.99960 * 1 2 3 29 29 H 1.08997 * 109.47115 * 269.99822 * 3 2 1 30 30 H 1.08995 * 109.47364 * 30.00213 * 3 2 1 31 31 H 1.09002 * 109.47090 * 149.99764 * 3 2 1 32 32 H 1.09000 * 109.46887 * 300.00372 * 8 6 4 33 33 H 1.08998 * 109.46846 * 59.99549 * 8 6 4 34 34 H 1.09001 * 109.47109 * 60.00906 * 9 8 6 35 35 H 1.09004 * 109.46774 * 179.97438 * 9 8 6 36 36 H 0.97007 * 120.00144 * 335.00404 * 12 10 9 37 37 H 1.07995 * 119.54702 * 180.02562 * 17 16 15 38 38 H 1.09006 * 109.47114 * 124.99974 * 19 18 17 39 39 H 0.96705 * 114.00265 * 180.02562 * 20 19 18 40 40 H 1.48494 * 110.00285 * 300.00190 * 21 19 18 41 41 H 1.48503 * 110.00109 * 61.31897 * 21 19 18 42 42 H 1.08008 * 120.75457 * 179.97438 * 22 18 17 43 43 H 1.07996 * 120.47514 * 180.28210 * 23 22 18 44 44 H 1.09006 * 109.47262 * 59.99583 * 24 10 9 45 45 H 1.08994 * 109.47190 * 180.02562 * 24 10 9 46 46 H 1.09006 * 109.47458 * 299.99989 * 25 6 4 47 47 H 1.09004 * 109.47239 * 60.00118 * 25 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2687 0.0000 4 6 2.1388 -1.1673 0.0005 5 8 1.5323 -2.2176 0.0005 6 6 3.6457 -1.1673 -0.0057 7 1 4.0129 -0.6553 0.8837 8 6 4.1557 -2.6099 -0.0108 9 6 5.6857 -2.6098 -0.0177 10 6 6.1900 -1.8863 -1.2679 11 1 5.8227 -2.3985 -2.1572 12 7 7.6550 -1.8869 -1.2749 13 6 8.3234 -1.7831 -2.4405 14 8 7.7110 -1.6895 -3.4858 15 6 9.8051 -1.7842 -2.4476 16 7 10.4686 -1.8872 -1.3028 17 6 11.7832 -1.8917 -1.2651 18 6 12.5289 -1.7886 -2.4284 19 6 14.0347 -1.7957 -2.3701 20 8 14.5343 -0.5311 -2.8098 21 14 14.5869 -2.1064 -0.6182 22 6 11.8760 -1.6791 -3.6464 23 6 10.4902 -1.6823 -3.6564 24 6 5.6802 -0.4438 -1.2629 25 6 4.1506 -0.4436 -1.2556 26 1 -0.3634 -0.5137 0.8900 27 1 -0.3634 1.0277 -0.0005 28 1 -0.3634 -0.5138 -0.8899 29 1 2.3792 1.5833 -1.0276 30 1 1.6085 2.0283 0.5138 31 1 3.1499 1.1383 0.5139 32 1 3.7960 -3.1255 0.8797 33 1 3.7886 -3.1219 -0.9002 34 1 6.0531 -2.0978 0.8716 35 1 6.0490 -3.6376 -0.0209 36 1 8.1440 -1.9620 -0.4404 37 1 12.2885 -1.9776 -0.3145 38 1 14.4197 -2.5835 -3.0176 39 1 15.4989 -0.4639 -2.7989 40 1 14.0684 -1.0391 0.2746 41 1 14.1005 -3.4326 -0.1600 42 1 12.4347 -1.5971 -4.5671 43 1 9.9490 -1.6033 -4.5876 44 1 6.0475 0.0683 -0.3735 45 1 6.0391 0.0715 -2.1537 46 1 3.7836 -0.9557 -2.1452 47 1 3.7873 0.5841 -1.2521 There are 62 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 62 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310356_13287726.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:27 Heat of formation + Delta-G solvation = -57.755891 kcal Electronic energy + Delta-G solvation = -28608.631891 eV Core-core repulsion = 24565.099584 eV Total energy + Delta-G solvation = -4043.532306 eV No. of doubly occupied orbitals = 62 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 334.173 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.93497 -41.42193 -40.32577 -38.58454 -37.90574 -36.61707 -35.31743 -33.95814 -33.06628 -31.94531 -31.13605 -28.91290 -27.91987 -27.06964 -25.09558 -24.42361 -23.81960 -23.17925 -21.60397 -21.37030 -20.18146 -19.20171 -18.69664 -18.22866 -17.90347 -17.34814 -16.95878 -16.84250 -16.72794 -16.28956 -16.20164 -15.66815 -15.45829 -15.21413 -15.00129 -14.93276 -14.66767 -14.39666 -14.27809 -14.04503 -13.97040 -13.80448 -13.69874 -13.64592 -13.37127 -13.23177 -12.80403 -12.58005 -12.57406 -12.33485 -12.18934 -12.15554 -11.56544 -11.37970 -11.33325 -11.08893 -10.79853 -10.60393 -10.53373 -10.29218 -10.01925 -9.68950 -5.15064 -0.59091 0.02334 1.06597 1.47518 1.63387 1.67692 1.78066 1.96072 2.04138 2.64986 2.88276 3.15835 3.40300 3.49931 3.54646 3.58360 3.64882 3.71876 3.84672 3.94683 3.97652 4.07061 4.14546 4.16163 4.20980 4.23890 4.26310 4.32331 4.37795 4.41875 4.46930 4.54856 4.62303 4.64833 4.75376 4.79876 4.86792 4.92251 4.95483 5.00381 5.07282 5.10225 5.24035 5.30425 5.31276 5.43322 5.48110 6.31185 6.32682 6.41071 6.61025 7.14613 7.20858 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.088 3.912 2 N -0.623 5.623 3 C 0.073 3.927 4 C 0.516 3.484 5 O -0.535 6.535 6 C -0.107 4.107 7 H 0.099 0.901 8 C -0.095 4.095 9 C -0.126 4.126 10 C 0.141 3.859 11 H 0.093 0.907 12 N -0.707 5.707 13 C 0.574 3.426 14 O -0.527 6.527 15 C 0.079 3.921 16 N -0.452 5.452 17 C 0.098 3.902 18 C -0.104 4.104 19 C -0.072 4.072 20 O -0.544 6.544 21 Si 0.685 3.315 22 C -0.050 4.050 23 C -0.107 4.107 24 C -0.127 4.127 25 C -0.119 4.119 26 H 0.061 0.939 27 H 0.075 0.925 28 H 0.061 0.939 29 H 0.062 0.938 30 H 0.073 0.927 31 H 0.076 0.924 32 H 0.077 0.923 33 H 0.075 0.925 34 H 0.071 0.929 35 H 0.076 0.924 36 H 0.411 0.589 37 H 0.156 0.844 38 H 0.082 0.918 39 H 0.387 0.613 40 H -0.246 1.246 41 H -0.250 1.250 42 H 0.149 0.851 43 H 0.155 0.845 44 H 0.068 0.932 45 H 0.074 0.926 46 H 0.072 0.928 47 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.601 3.092 1.850 7.520 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.358 5.358 3 C -0.069 4.069 4 C 0.304 3.696 5 O -0.411 6.411 6 C -0.128 4.128 7 H 0.117 0.883 8 C -0.133 4.133 9 C -0.164 4.164 10 C 0.037 3.963 11 H 0.111 0.889 12 N -0.358 5.358 13 C 0.359 3.641 14 O -0.402 6.402 15 C -0.059 4.059 16 N -0.163 5.163 17 C -0.061 4.061 18 C -0.107 4.107 19 C -0.183 4.183 20 O -0.351 6.351 21 Si 0.585 3.415 22 C -0.076 4.076 23 C -0.127 4.127 24 C -0.165 4.165 25 C -0.157 4.157 26 H 0.080 0.920 27 H 0.094 0.906 28 H 0.080 0.920 29 H 0.081 0.919 30 H 0.092 0.908 31 H 0.094 0.906 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.090 0.910 35 H 0.095 0.905 36 H 0.247 0.753 37 H 0.172 0.828 38 H 0.100 0.900 39 H 0.235 0.765 40 H -0.170 1.170 41 H -0.174 1.174 42 H 0.167 0.833 43 H 0.173 0.827 44 H 0.087 0.913 45 H 0.092 0.908 46 H 0.091 0.909 47 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 4.383 2.493 2.635 5.689 hybrid contribution 0.425 0.185 -0.760 0.890 sum 4.808 2.677 1.874 5.813 Atomic orbital electron populations 1.21649 0.78895 1.02400 1.02540 1.47784 1.07228 1.06468 1.74275 1.22053 0.97543 0.85254 1.02095 1.20721 0.90112 0.83066 0.75677 1.90720 1.70403 1.30980 1.48994 1.21388 0.91286 0.99340 1.00786 0.88305 1.21286 0.93499 0.94308 1.04220 1.21831 0.96122 1.01328 0.97137 1.21127 0.78551 0.96552 1.00041 0.88924 1.45914 1.07237 1.73243 1.09397 1.17815 0.85491 0.76676 0.84150 1.90816 1.68292 1.49466 1.31671 1.21210 0.94369 1.00558 0.89749 1.67495 1.09515 1.10532 1.28769 1.22437 0.89433 0.96937 0.97291 1.20640 0.95344 1.00038 0.94645 1.24636 0.91755 0.89676 1.12267 1.86486 1.26971 1.32002 1.89644 0.94916 0.91188 0.80692 0.74689 1.21553 0.93673 0.93962 0.98432 1.22241 0.94486 0.96385 0.99610 1.21902 0.94937 0.96585 1.03097 1.21764 0.95506 1.01531 0.96940 0.92018 0.90575 0.91995 0.91913 0.90836 0.90551 0.90396 0.90647 0.91000 0.90540 0.75299 0.82768 0.90026 0.76502 1.17007 1.17430 0.83279 0.82747 0.91297 0.90751 0.90941 0.89936 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.09 0.01 10.16 59.85 0.61 0.61 16 2 N -0.62 -0.35 3.27 -189.52 -0.62 -0.97 16 3 C 0.07 -0.20 8.77 59.84 0.52 0.32 16 4 C 0.52 1.38 7.08 -10.98 -0.08 1.30 16 5 O -0.53 -3.62 15.98 5.55 0.09 -3.53 16 6 C -0.11 0.02 1.72 -91.77 -0.16 -0.14 16 7 H 0.10 -0.18 7.41 -51.93 -0.38 -0.56 16 8 C -0.09 -0.04 4.49 -26.73 -0.12 -0.16 16 9 C -0.13 0.11 5.39 -26.73 -0.14 -0.03 16 10 C 0.14 0.07 2.45 -67.93 -0.17 -0.10 16 11 H 0.09 0.22 7.58 -51.93 -0.39 -0.17 16 12 N -0.71 -0.86 5.07 -54.65 -0.28 -1.14 16 13 C 0.57 2.07 7.78 -12.18 -0.09 1.98 16 14 O -0.53 -3.26 15.99 5.35 0.09 -3.17 16 15 C 0.08 0.24 6.75 -83.01 -0.56 -0.32 16 16 N -0.45 -1.26 9.54 -9.80 -0.09 -1.35 16 17 C 0.10 0.18 9.84 -17.57 -0.17 0.01 16 18 C -0.10 -0.10 5.40 -104.36 -0.56 -0.66 16 19 C -0.07 0.13 2.81 36.00 0.10 0.23 16 20 O -0.54 0.82 12.82 -35.23 -0.45 0.37 16 21 Si 0.68 -1.88 29.87 -169.99 -5.08 -6.95 16 22 C -0.05 -0.04 9.83 -39.31 -0.39 -0.42 16 23 C -0.11 -0.20 9.63 -39.05 -0.38 -0.58 16 24 C -0.13 0.05 5.49 -26.75 -0.15 -0.10 16 25 C -0.12 0.10 4.83 -26.75 -0.13 -0.03 16 26 H 0.06 0.05 8.14 -51.93 -0.42 -0.37 16 27 H 0.08 -0.18 7.80 -51.92 -0.40 -0.59 16 28 H 0.06 0.06 8.14 -51.93 -0.42 -0.36 16 29 H 0.06 -0.21 6.94 -51.93 -0.36 -0.57 16 30 H 0.07 -0.29 7.92 -51.93 -0.41 -0.70 16 31 H 0.08 -0.28 6.02 -51.93 -0.31 -0.60 16 32 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 33 H 0.07 0.15 8.10 -51.93 -0.42 -0.27 16 34 H 0.07 -0.14 8.14 -51.93 -0.42 -0.56 16 35 H 0.08 -0.06 8.14 -51.93 -0.42 -0.48 16 36 H 0.41 0.01 7.93 -40.82 -0.32 -0.32 16 37 H 0.16 0.10 4.88 -52.49 -0.26 -0.16 16 38 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 39 H 0.39 -2.51 8.74 45.56 0.40 -2.11 16 40 H -0.25 -0.07 7.05 56.52 0.40 0.33 16 41 H -0.25 0.07 7.11 56.52 0.40 0.48 16 42 H 0.15 -0.20 8.06 -52.48 -0.42 -0.63 16 43 H 0.15 0.18 7.64 -52.49 -0.40 -0.22 16 44 H 0.07 -0.09 8.14 -51.93 -0.42 -0.51 16 45 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 46 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 47 H 0.08 -0.18 4.52 -51.93 -0.23 -0.41 16 LS Contribution 375.72 15.07 5.66 5.66 Total: 0.00 -10.23 375.72 -9.47 -19.70 By element: Atomic # 1 Polarization: -3.61 SS G_CDS: -6.92 Total: -10.53 kcal Atomic # 6 Polarization: 3.78 SS G_CDS: -1.86 Total: 1.91 kcal Atomic # 7 Polarization: -2.47 SS G_CDS: -0.99 Total: -3.46 kcal Atomic # 8 Polarization: -6.05 SS G_CDS: -0.28 Total: -6.33 kcal Atomic # 14 Polarization: -1.88 SS G_CDS: -5.08 Total: -6.95 kcal Total LS contribution 5.66 Total: 5.66 kcal Total: -10.23 -9.47 -19.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_13287726.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -38.058 kcal (2) G-P(sol) polarization free energy of solvation -10.229 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -48.287 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.469 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.698 kcal (6) G-S(sol) free energy of system = (1) + (5) -57.756 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds