Wall clock time and date at job start Sun Mar 7 2021 09:00:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46496 * 120.00110 * 2 1 4 4 C 1.34780 * 119.99555 * 179.97438 * 2 1 3 5 5 O 1.21281 * 119.99999 * 4.75590 * 4 2 1 6 6 C 1.50697 * 119.99488 * 184.74913 * 4 2 1 7 7 H 1.09000 * 109.47398 * 309.93328 * 6 4 2 8 8 C 1.52997 * 109.46929 * 69.93721 * 6 4 2 9 9 C 1.53001 * 109.47043 * 179.97438 * 8 6 4 10 10 C 1.53004 * 109.47108 * 299.99427 * 9 8 6 11 11 H 1.08999 * 109.47387 * 300.00681 * 10 9 8 12 12 N 1.46506 * 109.47248 * 179.97438 * 10 9 8 13 13 C 1.34773 * 119.99735 * 85.28012 * 12 10 9 14 14 O 1.21629 * 119.99934 * 359.72144 * 13 12 10 15 15 C 1.47263 * 120.00003 * 179.72739 * 13 12 10 16 16 C 1.36766 * 126.93905 * 359.68200 * 15 13 12 17 17 N 1.34664 * 108.39221 * 179.87605 * 16 15 13 18 18 C 1.46506 * 124.84883 * 180.13626 * 17 16 15 19 19 C 1.36443 * 110.30009 * 0.40554 * 17 16 15 20 20 C 1.50696 * 125.57384 * 179.73343 * 19 17 16 21 21 O 1.42895 * 109.47174 * 29.99473 * 20 19 17 22 22 Si 1.86297 * 109.47361 * 149.99943 * 20 19 17 23 23 C 1.34488 * 108.85679 * 359.75230 * 19 17 16 24 24 C 1.53005 * 109.46582 * 60.00210 * 10 9 8 25 25 C 1.53001 * 109.47228 * 299.99717 * 24 10 9 26 26 H 1.09006 * 109.46860 * 270.00309 * 1 2 3 27 27 H 1.09003 * 109.46822 * 29.99222 * 1 2 3 28 28 H 1.08997 * 109.47690 * 150.00223 * 1 2 3 29 29 H 1.09004 * 109.46838 * 263.31578 * 3 2 1 30 30 H 1.08999 * 109.47464 * 23.31166 * 3 2 1 31 31 H 1.08997 * 109.47201 * 143.31700 * 3 2 1 32 32 H 1.08998 * 109.47486 * 299.99293 * 8 6 4 33 33 H 1.09000 * 109.47401 * 59.99609 * 8 6 4 34 34 H 1.09003 * 109.47287 * 180.02562 * 9 8 6 35 35 H 1.08999 * 109.47553 * 60.00006 * 9 8 6 36 36 H 0.96994 * 119.99978 * 265.00817 * 12 10 9 37 37 H 1.08003 * 125.80316 * 359.97438 * 16 15 13 38 38 H 1.08997 * 109.47245 * 270.31121 * 18 17 16 39 39 H 1.09004 * 109.46604 * 30.30720 * 18 17 16 40 40 H 1.08998 * 109.47036 * 150.30943 * 18 17 16 41 41 H 1.09004 * 109.46750 * 270.00311 * 20 19 17 42 42 H 0.96702 * 113.99965 * 60.00348 * 21 20 19 43 43 H 1.48504 * 109.99786 * 58.68171 * 22 20 19 44 44 H 1.48504 * 109.99970 * 179.97438 * 22 20 19 45 45 H 1.07996 * 126.83756 * 180.02562 * 23 19 17 46 46 H 1.08999 * 109.46874 * 60.00157 * 24 10 9 47 47 H 1.08998 * 109.46883 * 179.97438 * 24 10 9 48 48 H 1.08995 * 109.47028 * 179.97438 * 25 24 10 49 49 H 1.09000 * 109.47110 * 300.00318 * 25 24 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1976 1.2687 0.0000 4 6 2.1389 -1.1673 0.0005 5 8 1.5355 -2.2158 -0.0861 6 6 3.6419 -1.1695 0.1086 7 1 4.0599 -0.4786 -0.6237 8 6 4.0527 -0.7312 1.5157 9 6 5.5787 -0.7341 1.6257 10 6 6.1069 -2.1446 1.3564 11 1 5.6885 -2.8352 2.0886 12 7 7.5682 -2.1472 1.4610 13 6 8.1573 -2.3015 2.6633 14 8 7.4758 -2.4336 3.6620 15 6 9.6262 -2.3102 2.7678 16 6 10.5238 -2.1801 1.7441 17 7 11.7668 -2.2377 2.2590 18 6 13.0021 -2.1331 1.4782 19 6 11.7115 -2.4134 3.6109 20 6 12.9006 -2.5294 4.5293 21 8 13.9914 -1.7778 3.9934 22 14 12.4541 -1.8633 6.2108 23 6 10.4222 -2.4665 3.9899 24 6 5.6961 -2.5828 -0.0509 25 6 4.1700 -2.5800 -0.1608 26 1 -0.3633 0.0001 1.0277 27 1 -0.3633 0.8901 -0.5137 28 1 -0.3634 -0.8899 -0.5138 29 1 2.4828 1.5235 -1.0207 30 1 1.5620 2.0553 0.4067 31 1 3.0929 1.1713 0.6139 32 1 3.6762 0.2734 1.7079 33 1 3.6347 -1.4221 2.2480 34 1 5.8714 -0.4223 2.6283 35 1 5.9971 -0.0434 0.8935 36 1 8.1116 -2.0417 0.6646 37 1 10.2776 -2.0514 0.7004 38 1 13.3110 -3.1262 1.1522 39 1 12.8284 -1.5022 0.6064 40 1 13.7856 -1.6930 2.0950 41 1 13.1901 -3.5766 4.6183 42 1 13.8045 -0.8350 3.8864 43 1 11.3003 -2.6162 6.7653 44 1 13.6184 -1.9727 7.1260 45 1 10.0475 -2.5976 4.9943 46 1 6.1144 -1.8922 -0.7830 47 1 6.0727 -3.5875 -0.2429 48 1 3.8774 -2.8917 -1.1634 49 1 3.7517 -3.2706 0.5715 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_13287730.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:30 Heat of formation + Delta-G solvation = -48.720083 kcal Electronic energy + Delta-G solvation = -29387.431856 eV Core-core repulsion = 25316.979893 eV Total energy + Delta-G solvation = -4070.451963 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.188 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -42.45583 -41.53243 -40.42245 -38.53307 -37.78371 -36.64964 -35.21876 -33.72779 -31.98981 -31.79555 -30.65514 -28.77040 -27.58836 -27.05523 -26.23197 -24.35979 -23.80490 -22.92634 -21.40241 -20.91608 -20.49715 -20.07897 -18.98347 -17.99442 -17.53404 -17.24094 -17.08115 -16.82527 -16.77301 -16.63790 -15.92868 -15.60039 -15.40979 -15.34639 -15.05076 -14.96122 -14.86163 -14.67464 -14.27808 -14.07601 -13.86819 -13.59075 -13.55786 -13.45655 -13.31430 -13.22930 -13.16399 -12.99052 -12.68690 -12.59293 -12.29655 -12.14174 -12.08585 -12.07441 -11.51075 -11.31864 -11.03279 -10.72186 -10.68747 -10.07613 -9.69186 -9.55285 -9.20274 -5.00002 0.76710 1.03288 1.39009 1.53733 1.63446 1.90012 2.03220 2.07978 2.29505 2.57488 3.30218 3.44098 3.56153 3.62297 3.64901 3.90926 3.97425 4.03141 4.12495 4.19153 4.25179 4.32414 4.35420 4.40393 4.43334 4.44735 4.45362 4.47088 4.48869 4.53396 4.63214 4.73520 4.80591 4.84142 4.87649 4.90823 4.95289 4.99596 5.04558 5.08570 5.16569 5.19756 5.29838 5.37103 5.49541 5.56497 5.65347 5.97765 6.26654 6.31754 6.60126 6.70050 7.10999 7.38992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.623 5.623 3 C 0.060 3.940 4 C 0.506 3.494 5 O -0.590 6.590 6 C -0.096 4.096 7 H 0.129 0.871 8 C -0.106 4.106 9 C -0.117 4.117 10 C 0.144 3.856 11 H 0.052 0.948 12 N -0.709 5.709 13 C 0.587 3.413 14 O -0.599 6.599 15 C -0.261 4.261 16 C 0.078 3.922 17 N -0.421 5.421 18 C 0.045 3.955 19 C -0.015 4.015 20 C -0.033 4.033 21 O -0.544 6.544 22 Si 0.787 3.213 23 C -0.169 4.169 24 C -0.112 4.112 25 C -0.096 4.096 26 H 0.055 0.945 27 H 0.096 0.904 28 H 0.054 0.946 29 H 0.074 0.926 30 H 0.089 0.911 31 H 0.092 0.908 32 H 0.095 0.905 33 H 0.044 0.956 34 H 0.052 0.948 35 H 0.098 0.902 36 H 0.415 0.585 37 H 0.213 0.787 38 H 0.072 0.928 39 H 0.109 0.891 40 H 0.118 0.882 41 H 0.114 0.886 42 H 0.398 0.602 43 H -0.302 1.302 44 H -0.285 1.285 45 H 0.129 0.871 46 H 0.102 0.898 47 H 0.075 0.925 48 H 0.071 0.929 49 H 0.046 0.954 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.490 9.582 -7.518 13.801 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 N -0.356 5.356 3 C -0.082 4.082 4 C 0.295 3.705 5 O -0.471 6.471 6 C -0.117 4.117 7 H 0.147 0.853 8 C -0.144 4.144 9 C -0.155 4.155 10 C 0.040 3.960 11 H 0.070 0.930 12 N -0.360 5.360 13 C 0.377 3.623 14 O -0.481 6.481 15 C -0.271 4.271 16 C -0.060 4.060 17 N -0.094 5.094 18 C -0.094 4.094 19 C -0.125 4.125 20 C -0.144 4.144 21 O -0.352 6.352 22 Si 0.693 3.307 23 C -0.194 4.194 24 C -0.150 4.150 25 C -0.135 4.135 26 H 0.074 0.926 27 H 0.115 0.885 28 H 0.073 0.927 29 H 0.092 0.908 30 H 0.108 0.892 31 H 0.110 0.890 32 H 0.113 0.887 33 H 0.063 0.937 34 H 0.071 0.929 35 H 0.116 0.884 36 H 0.252 0.748 37 H 0.229 0.771 38 H 0.091 0.909 39 H 0.128 0.872 40 H 0.136 0.864 41 H 0.131 0.869 42 H 0.249 0.751 43 H -0.229 1.229 44 H -0.212 1.212 45 H 0.147 0.853 46 H 0.121 0.879 47 H 0.094 0.906 48 H 0.090 0.910 49 H 0.064 0.936 Dipole moment (debyes) X Y Z Total from point charges 6.234 8.260 -6.205 12.066 hybrid contribution -0.481 -1.037 -0.180 1.157 sum 5.753 7.222 -6.385 11.226 Atomic orbital electron populations 1.21736 0.79214 1.03447 1.02062 1.47954 1.07542 1.07234 1.72862 1.22344 0.98344 0.83807 1.03669 1.21324 0.91373 0.82922 0.74836 1.90684 1.71587 1.33160 1.51630 1.21381 0.89450 1.00429 1.00469 0.85289 1.21569 0.96215 1.02541 0.94059 1.21822 0.94293 0.96813 1.02575 1.20952 0.79558 0.97376 0.98160 0.92955 1.45680 1.07224 1.74208 1.08897 1.17724 0.86956 0.74579 0.83019 1.90758 1.66358 1.52774 1.38192 1.20285 0.91528 1.20375 0.94875 1.22446 0.82500 1.01486 0.99565 1.43729 1.07423 1.52561 1.05733 1.22800 0.84494 1.04495 0.97648 1.20716 0.95618 1.11300 0.84838 1.24658 0.85043 1.00009 1.04735 1.86427 1.37305 1.25802 1.85666 0.93255 0.75835 0.89668 0.71951 1.21720 0.91575 1.07995 0.98082 1.21735 0.94851 1.03309 0.95077 1.21254 0.95025 0.94908 1.02274 0.92642 0.88516 0.92707 0.90788 0.89178 0.89009 0.88691 0.93665 0.92914 0.88400 0.74790 0.77079 0.90896 0.87227 0.86381 0.86908 0.75085 1.22911 1.21156 0.85342 0.87918 0.90639 0.91029 0.93554 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.04 10.44 127.77 1.33 1.38 16 2 N -0.62 -0.47 3.27 -871.88 -2.85 -3.32 16 3 C 0.06 -0.47 9.84 127.77 1.26 0.79 16 4 C 0.51 3.02 6.93 87.66 0.61 3.63 16 5 O -0.59 -9.39 15.53 -3.03 -0.05 -9.44 16 6 C -0.10 0.12 1.71 -11.54 -0.02 0.10 16 7 H 0.13 -0.98 7.67 -2.39 -0.02 -1.00 16 8 C -0.11 0.13 4.90 30.59 0.15 0.28 16 9 C -0.12 0.20 5.50 30.60 0.17 0.37 16 10 C 0.14 0.10 2.46 44.99 0.11 0.21 16 11 H 0.05 0.46 7.57 -2.39 -0.02 0.44 16 12 N -0.71 0.53 5.07 -445.93 -2.26 -1.73 16 13 C 0.59 4.78 7.78 86.62 0.67 5.46 16 14 O -0.60 -11.22 16.63 -4.12 -0.07 -11.29 16 15 C -0.26 -1.15 6.29 -19.04 -0.12 -1.27 16 16 C 0.08 -0.33 10.83 83.91 0.91 0.58 16 17 N -0.42 1.70 3.09 -533.23 -1.65 0.06 16 18 C 0.05 -0.46 10.71 127.77 1.37 0.91 16 19 C -0.01 -0.01 6.14 40.98 0.25 0.25 16 20 C -0.03 0.07 2.98 71.23 0.21 0.28 16 21 O -0.54 3.09 9.95 -148.98 -1.48 1.61 16 22 Si 0.79 -0.68 31.29 68.60 2.15 1.46 16 23 C -0.17 -1.09 9.49 23.62 0.22 -0.87 16 24 C -0.11 0.46 5.39 30.60 0.16 0.63 16 25 C -0.10 -0.10 4.55 30.60 0.14 0.03 16 26 H 0.05 0.03 8.14 -2.38 -0.02 0.01 16 27 H 0.10 -0.49 8.07 -2.39 -0.02 -0.51 16 28 H 0.05 0.30 7.36 -2.39 -0.02 0.28 16 29 H 0.07 -0.75 8.14 -2.38 -0.02 -0.77 16 30 H 0.09 -0.92 8.02 -2.39 -0.02 -0.93 16 31 H 0.09 -0.92 4.37 -2.39 -0.01 -0.93 16 32 H 0.09 -0.47 5.45 -2.39 -0.01 -0.48 16 33 H 0.04 0.21 8.14 -2.39 -0.02 0.20 16 34 H 0.05 0.20 8.14 -2.39 -0.02 0.18 16 35 H 0.10 -0.73 8.14 -2.39 -0.02 -0.75 16 36 H 0.41 -3.65 7.54 -92.71 -0.70 -4.35 16 37 H 0.21 -2.89 7.45 -2.91 -0.02 -2.91 16 38 H 0.07 -0.68 8.14 -2.39 -0.02 -0.70 16 39 H 0.11 -1.67 8.13 -2.38 -0.02 -1.69 16 40 H 0.12 -1.27 4.93 -2.39 -0.01 -1.29 16 41 H 0.11 -0.09 7.96 -2.38 -0.02 -0.11 16 42 H 0.40 -5.31 8.38 -74.06 -0.62 -5.93 16 43 H -0.30 -2.25 6.77 99.48 0.67 -1.57 16 44 H -0.28 -1.27 7.11 99.48 0.71 -0.57 16 45 H 0.13 1.29 6.67 -2.91 -0.02 1.27 16 46 H 0.10 -1.03 8.14 -2.39 -0.02 -1.05 16 47 H 0.07 -0.27 8.14 -2.39 -0.02 -0.29 16 48 H 0.07 0.13 8.14 -2.39 -0.02 0.11 16 49 H 0.05 0.34 7.99 -2.39 -0.02 0.32 16 Total: 0.00 -33.80 385.53 0.88 -32.92 By element: Atomic # 1 Polarization: -22.68 SS G_CDS: -0.34 Total: -23.02 kcal Atomic # 6 Polarization: 5.32 SS G_CDS: 7.43 Total: 12.75 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -6.76 Total: -5.00 kcal Atomic # 8 Polarization: -17.53 SS G_CDS: -1.60 Total: -19.12 kcal Atomic # 14 Polarization: -0.68 SS G_CDS: 2.15 Total: 1.46 kcal Total: -33.80 0.88 -32.92 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_13287730.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -15.798 kcal (2) G-P(sol) polarization free energy of solvation -33.803 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -49.600 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.923 kcal (6) G-S(sol) free energy of system = (1) + (5) -48.720 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds