Wall clock time and date at job start Sun Mar 7 2021 09:00:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.36417 * 125.80230 * 2 1 4 4 C 1.47380 * 127.19027 * 0.02562 * 3 2 1 5 5 O 1.21610 * 120.00214 * 359.97438 * 4 3 2 6 6 N 1.34774 * 119.99874 * 179.97438 * 4 3 2 7 7 C 1.46504 * 119.99971 * 180.02562 * 6 4 3 8 8 H 1.09006 * 109.46946 * 324.99365 * 7 6 4 9 9 C 1.52996 * 109.47489 * 84.99806 * 7 6 4 10 10 C 1.52996 * 109.47250 * 180.02562 * 9 7 6 11 11 C 1.52998 * 109.46896 * 299.99992 * 10 9 7 12 12 H 1.09002 * 109.47636 * 299.99720 * 11 10 9 13 13 C 1.50705 * 109.46904 * 180.02562 * 11 10 9 14 14 O 1.21277 * 119.99972 * 262.98971 * 13 11 10 15 15 N 1.34770 * 120.00091 * 82.99078 * 13 11 10 16 16 C 1.46503 * 120.00145 * 183.70310 * 15 13 11 17 17 C 1.46501 * 120.00006 * 3.70852 * 15 13 11 18 18 C 1.52994 * 109.47481 * 60.00152 * 11 10 9 19 19 C 1.52998 * 109.46818 * 204.99896 * 7 6 4 20 20 C 1.47013 * 105.61589 * 180.25656 * 3 2 1 21 21 C 1.34186 * 105.95441 * 359.57366 * 20 3 2 22 22 C 1.50701 * 125.43783 * 180.14098 * 21 20 3 23 23 O 1.42903 * 109.47301 * 300.31600 * 22 21 20 24 24 Si 1.86302 * 109.46966 * 180.31306 * 22 21 20 25 25 O 1.33646 * 125.80061 * 179.97438 * 2 1 3 26 26 H 1.09004 * 109.46695 * 90.00071 * 1 2 3 27 27 H 1.08998 * 109.46932 * 209.99879 * 1 2 3 28 28 H 1.08994 * 109.47380 * 330.00226 * 1 2 3 29 29 H 0.96996 * 119.99892 * 359.97438 * 6 4 3 30 30 H 1.09007 * 109.46964 * 300.00452 * 9 7 6 31 31 H 1.09001 * 109.46939 * 59.99934 * 9 7 6 32 32 H 1.09003 * 109.47103 * 179.97438 * 10 9 7 33 33 H 1.09001 * 109.47244 * 60.00070 * 10 9 7 34 34 H 1.09004 * 109.46525 * 89.99856 * 16 15 13 35 35 H 1.08994 * 109.47620 * 209.99821 * 16 15 13 36 36 H 1.09002 * 109.47195 * 330.00987 * 16 15 13 37 37 H 1.08994 * 109.47427 * 354.65251 * 17 15 13 38 38 H 1.09008 * 109.46930 * 114.65295 * 17 15 13 39 39 H 1.09000 * 109.46786 * 234.65018 * 17 15 13 40 40 H 1.08999 * 109.47525 * 179.97438 * 18 11 10 41 41 H 1.09002 * 109.47039 * 59.99202 * 18 11 10 42 42 H 1.09001 * 109.47238 * 299.99838 * 19 7 6 43 43 H 1.09003 * 109.47296 * 59.99811 * 19 7 6 44 44 H 1.07995 * 127.02467 * 179.73993 * 20 3 2 45 45 H 1.09005 * 109.46944 * 60.31580 * 22 21 20 46 46 H 0.96694 * 113.99850 * 180.02562 * 23 22 21 47 47 H 1.48499 * 109.99982 * 298.67996 * 24 22 21 48 48 H 1.48493 * 109.99868 * 60.00083 * 24 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3051 1.1064 0.0000 4 6 1.8740 2.5157 0.0005 5 8 0.6890 2.7892 0.0006 6 7 2.7930 3.5015 0.0010 7 6 2.3645 4.9025 0.0021 8 1 1.4531 5.0041 -0.5872 9 6 2.0955 5.3525 1.4394 10 6 1.6474 6.8153 1.4404 11 6 2.7478 7.6862 0.8309 12 1 3.6594 7.5851 1.4199 13 6 2.3067 9.1272 0.8325 14 8 1.8184 9.6130 -0.1657 15 7 2.4548 9.8761 1.9431 16 6 1.9526 11.2520 1.9713 17 6 3.1182 9.3142 3.1223 18 6 3.0169 7.2363 -0.6064 19 6 3.4654 5.7729 -0.6072 20 6 3.6849 0.5991 -0.0063 21 6 3.5859 -0.7391 0.0001 22 6 4.7459 -1.7011 0.0001 23 8 5.5424 -1.4870 -1.1669 24 14 4.1027 -3.4495 0.0009 25 8 2.2888 -1.0839 0.0005 26 1 -0.3633 0.0000 -1.0277 27 1 -0.3633 -0.8900 0.5138 28 1 -0.3634 0.8899 0.5138 29 1 3.7381 3.2834 0.0013 30 1 1.3112 4.7322 1.8735 31 1 3.0069 5.2508 2.0285 32 1 1.4552 7.1358 2.4644 33 1 0.7358 6.9166 0.8513 34 1 0.9221 11.2554 2.3268 35 1 2.5699 11.8506 2.6410 36 1 1.9916 11.6737 0.9669 37 1 3.3360 8.2604 2.9491 38 1 4.0484 9.8520 3.3067 39 1 2.4639 9.4125 3.9886 40 1 3.8006 7.8570 -1.0408 41 1 2.1054 7.3374 -1.1955 42 1 4.3769 5.6713 -0.0181 43 1 3.6571 5.4523 -1.6313 44 1 4.5927 1.1839 -0.0120 45 1 5.3538 -1.5372 0.8900 46 1 6.3085 -2.0732 -1.2332 47 1 3.2991 -3.6945 1.2254 48 1 3.2722 -3.6857 -1.2073 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_13308374.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:00:46 Heat of formation + Delta-G solvation = -90.022961 kcal Electronic energy + Delta-G solvation = -29606.614397 eV Core-core repulsion = 25436.652745 eV Total energy + Delta-G solvation = -4169.961652 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 337.177 amu Computer time = 0.98 seconds Orbital eigenvalues (eV) -43.90298 -41.60137 -40.69117 -38.68410 -37.88645 -36.64164 -35.40513 -34.27316 -33.29582 -31.91066 -31.26544 -29.51209 -28.79063 -27.18510 -25.90496 -24.65590 -23.85344 -23.49974 -22.05309 -21.51551 -20.60449 -20.01837 -18.74655 -18.45293 -18.09746 -17.52863 -17.42880 -17.17224 -17.00317 -16.74429 -16.05862 -15.86550 -15.80875 -15.30784 -15.14788 -14.91413 -14.80162 -14.41659 -14.27986 -14.25122 -14.15066 -14.00433 -13.92754 -13.49115 -13.46530 -13.41231 -13.25517 -13.16234 -12.95450 -12.70560 -12.59568 -12.29378 -12.21026 -12.16690 -11.54787 -11.40178 -11.20204 -11.03084 -10.75716 -10.48708 -10.15707 -9.74790 -9.65354 -5.09046 0.09797 0.73543 1.17439 1.40250 1.50586 1.63926 1.98146 2.01565 2.09040 2.17463 3.15394 3.40843 3.55850 3.58845 3.62074 3.66296 3.69429 3.94794 4.04560 4.06859 4.08950 4.24143 4.25641 4.29123 4.36888 4.40202 4.41759 4.43014 4.43422 4.45362 4.54897 4.57052 4.69770 4.72329 4.76666 4.85843 4.86631 4.94828 4.99665 5.01483 5.08974 5.11166 5.13548 5.22727 5.29118 5.43577 5.46247 5.78464 6.29148 6.44904 6.85399 7.08399 7.11506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 C 0.072 3.928 3 C -0.262 4.262 4 C 0.590 3.410 5 O -0.573 6.573 6 N -0.704 5.704 7 C 0.144 3.856 8 H 0.061 0.939 9 C -0.117 4.117 10 C -0.098 4.098 11 C -0.100 4.100 12 H 0.130 0.870 13 C 0.507 3.493 14 O -0.589 6.589 15 N -0.623 5.623 16 C 0.078 3.922 17 C 0.063 3.937 18 C -0.097 4.097 19 C -0.113 4.113 20 C -0.137 4.137 21 C -0.039 4.039 22 C -0.032 4.032 23 O -0.558 6.558 24 Si 0.803 3.197 25 O -0.194 6.194 26 H 0.096 0.904 27 H 0.093 0.907 28 H 0.103 0.897 29 H 0.415 0.585 30 H 0.054 0.946 31 H 0.095 0.905 32 H 0.086 0.914 33 H 0.047 0.953 34 H 0.055 0.945 35 H 0.096 0.904 36 H 0.055 0.945 37 H 0.098 0.902 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.073 0.927 41 H 0.050 0.950 42 H 0.101 0.899 43 H 0.076 0.924 44 H 0.189 0.811 45 H 0.131 0.869 46 H 0.415 0.585 47 H -0.295 1.295 48 H -0.312 1.312 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 10.342 -3.211 6.659 12.712 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.140 4.140 2 C 0.019 3.981 3 C -0.267 4.267 4 C 0.379 3.621 5 O -0.455 6.455 6 N -0.354 5.354 7 C 0.040 3.960 8 H 0.079 0.921 9 C -0.155 4.155 10 C -0.137 4.137 11 C -0.121 4.121 12 H 0.147 0.853 13 C 0.296 3.704 14 O -0.470 6.470 15 N -0.355 5.355 16 C -0.064 4.064 17 C -0.078 4.078 18 C -0.135 4.135 19 C -0.151 4.151 20 C -0.156 4.156 21 C -0.086 4.086 22 C -0.142 4.142 23 O -0.370 6.370 24 Si 0.710 3.290 25 O -0.092 6.092 26 H 0.114 0.886 27 H 0.112 0.888 28 H 0.121 0.879 29 H 0.252 0.748 30 H 0.073 0.927 31 H 0.113 0.887 32 H 0.105 0.895 33 H 0.065 0.935 34 H 0.074 0.926 35 H 0.114 0.886 36 H 0.073 0.927 37 H 0.117 0.883 38 H 0.095 0.905 39 H 0.095 0.905 40 H 0.092 0.908 41 H 0.068 0.932 42 H 0.119 0.881 43 H 0.094 0.906 44 H 0.206 0.794 45 H 0.149 0.851 46 H 0.268 0.732 47 H -0.223 1.223 48 H -0.241 1.241 Dipole moment (debyes) X Y Z Total from point charges 8.073 -3.082 6.064 10.557 hybrid contribution -0.339 0.779 -0.222 0.878 sum 7.734 -2.303 5.842 9.962 Atomic orbital electron populations 1.20700 0.82697 1.05533 1.05052 1.23293 0.94844 0.83119 0.96816 1.21292 0.94236 0.93583 1.17549 1.17278 0.85326 0.84201 0.75279 1.90760 1.18045 1.84437 1.52238 1.45700 1.10047 1.05316 1.74377 1.21036 0.98462 0.79328 0.97183 0.92120 1.21822 1.02720 0.94789 0.96202 1.21379 0.96733 0.94000 1.01592 1.21439 1.01671 0.89248 0.99717 0.85252 1.21299 0.77595 0.89393 0.82096 1.90686 1.46802 1.74687 1.34794 1.47971 1.58579 1.14279 1.14720 1.21704 0.99778 0.82074 1.02868 1.22228 0.98084 1.01014 0.86491 1.21285 1.01842 0.95754 0.94643 1.21750 0.98126 0.92872 1.02363 1.22848 0.96506 0.93166 1.03037 1.21863 0.82229 0.95618 1.08869 1.23880 0.90652 1.06451 0.93213 1.86399 1.44057 1.65050 1.41543 0.94413 0.82997 0.75791 0.75826 1.83690 1.17495 1.35874 1.72178 0.88611 0.88807 0.87889 0.74800 0.92721 0.88652 0.89544 0.93452 0.92604 0.88557 0.92652 0.88338 0.90486 0.90465 0.90808 0.93155 0.88068 0.90554 0.79380 0.85126 0.73179 1.22252 1.24063 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.08 -0.41 9.89 71.24 0.70 0.29 16 2 C 0.07 0.61 7.37 25.26 0.19 0.80 16 3 C -0.26 -1.83 6.31 -18.99 -0.12 -1.95 16 4 C 0.59 4.60 7.78 86.65 0.67 5.27 16 5 O -0.57 -8.29 14.51 -4.06 -0.06 -8.35 16 6 N -0.70 -0.29 5.07 -445.84 -2.26 -2.55 16 7 C 0.14 0.07 2.45 44.99 0.11 0.18 16 8 H 0.06 0.45 7.58 -2.38 -0.02 0.43 16 9 C -0.12 0.19 5.49 30.59 0.17 0.36 16 10 C -0.10 0.10 5.01 30.59 0.15 0.25 16 11 C -0.10 0.15 1.66 -11.54 -0.02 0.13 16 12 H 0.13 -1.06 6.36 -2.39 -0.02 -1.07 16 13 C 0.51 2.87 6.80 87.66 0.60 3.47 16 14 O -0.59 -9.25 15.63 -3.02 -0.05 -9.30 16 15 N -0.62 -0.34 3.27 -871.88 -2.85 -3.19 16 16 C 0.08 0.03 10.51 127.77 1.34 1.38 16 17 C 0.06 -0.51 10.25 127.77 1.31 0.80 16 18 C -0.10 -0.05 4.71 30.61 0.14 0.09 16 19 C -0.11 0.45 5.40 30.61 0.17 0.61 16 20 C -0.14 -0.33 10.46 23.65 0.25 -0.08 16 21 C -0.04 -0.17 6.24 24.76 0.15 -0.01 16 22 C -0.03 0.12 2.97 71.24 0.21 0.33 16 23 O -0.56 2.49 12.84 -148.98 -1.91 0.58 16 24 Si 0.80 -2.01 32.09 68.60 2.20 0.19 16 25 O -0.19 -1.75 8.89 4.53 0.04 -1.71 16 26 H 0.10 0.36 8.14 -2.38 -0.02 0.34 16 27 H 0.09 0.13 8.14 -2.39 -0.02 0.11 16 28 H 0.10 0.71 6.48 -2.39 -0.02 0.69 16 29 H 0.41 -2.31 7.77 -92.71 -0.72 -3.03 16 30 H 0.05 0.18 8.14 -2.38 -0.02 0.16 16 31 H 0.09 -0.64 8.14 -2.39 -0.02 -0.66 16 32 H 0.09 -0.33 7.54 -2.39 -0.02 -0.34 16 33 H 0.05 0.23 8.14 -2.39 -0.02 0.21 16 34 H 0.06 0.02 8.14 -2.38 -0.02 0.00 16 35 H 0.10 -0.49 8.07 -2.39 -0.02 -0.51 16 36 H 0.05 0.29 7.37 -2.39 -0.02 0.28 16 37 H 0.10 -1.10 4.95 -2.39 -0.01 -1.11 16 38 H 0.08 -0.78 8.14 -2.38 -0.02 -0.80 16 39 H 0.08 -0.74 8.14 -2.39 -0.02 -0.76 16 40 H 0.07 0.05 8.14 -2.39 -0.02 0.03 16 41 H 0.05 0.34 7.88 -2.39 -0.02 0.32 16 42 H 0.10 -0.95 8.14 -2.39 -0.02 -0.96 16 43 H 0.08 -0.25 8.14 -2.39 -0.02 -0.27 16 44 H 0.19 -0.87 7.74 -2.91 -0.02 -0.89 16 45 H 0.13 -1.37 7.96 -2.38 -0.02 -1.39 16 46 H 0.41 -6.57 8.74 -74.06 -0.65 -7.22 16 47 H -0.29 -1.30 7.11 99.48 0.71 -0.60 16 48 H -0.31 -2.44 7.11 99.48 0.71 -1.73 16 Total: 0.00 -31.98 387.81 0.79 -31.19 By element: Atomic # 1 Polarization: -18.44 SS G_CDS: -0.34 Total: -18.78 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 6.03 Total: 11.91 kcal Atomic # 7 Polarization: -0.63 SS G_CDS: -5.12 Total: -5.74 kcal Atomic # 8 Polarization: -16.80 SS G_CDS: -1.98 Total: -18.77 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: 2.20 Total: 0.19 kcal Total: -31.98 0.79 -31.19 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_13308374.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -58.831 kcal (2) G-P(sol) polarization free energy of solvation -31.982 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.813 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.790 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.192 kcal (6) G-S(sol) free energy of system = (1) + (5) -90.023 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds