Wall clock time and date at job start Sun Mar 7 2021 09:01:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46505 * 1 3 3 C 1.46504 * 119.99775 * 2 1 4 4 C 1.34772 * 120.00171 * 179.97438 * 2 1 3 5 5 O 1.21279 * 120.00247 * 5.26644 * 4 2 1 6 6 C 1.50707 * 119.99869 * 185.25972 * 4 2 1 7 7 H 1.08995 * 109.47312 * 323.16347 * 6 4 2 8 8 C 1.53004 * 109.46649 * 83.16558 * 6 4 2 9 9 C 1.53002 * 109.46731 * 180.02562 * 8 6 4 10 10 C 1.52996 * 109.46754 * 299.99288 * 9 8 6 11 11 H 1.08995 * 109.47551 * 300.00306 * 10 9 8 12 12 N 1.46507 * 109.46726 * 180.02562 * 10 9 8 13 13 C 1.34777 * 119.99717 * 85.00448 * 12 10 9 14 14 O 1.21280 * 120.00077 * 359.97438 * 13 12 10 15 15 C 1.50704 * 119.99701 * 179.97438 * 13 12 10 16 16 O 1.42891 * 109.46992 * 179.97438 * 15 13 12 17 17 C 1.35908 * 116.99998 * 180.02562 * 16 15 13 18 18 C 1.38732 * 120.05428 * 359.72768 * 17 16 15 19 19 C 1.38143 * 119.93877 * 179.69756 * 18 17 16 20 20 C 1.38258 * 120.06055 * 0.60233 * 19 18 17 21 21 C 1.50702 * 119.94865 * 179.70234 * 20 19 18 22 22 O 1.42897 * 109.47538 * 119.97184 * 21 20 19 23 23 Si 1.86299 * 109.46842 * 359.97292 * 21 20 19 24 24 C 1.38267 * 120.11081 * 359.67115 * 20 19 18 25 25 C 1.38147 * 120.05429 * 0.02872 * 24 20 19 26 26 C 1.53000 * 109.47090 * 60.00507 * 10 9 8 27 27 C 1.52996 * 109.46865 * 203.15863 * 6 4 2 28 28 H 1.09001 * 109.47287 * 270.00107 * 1 2 3 29 29 H 1.09000 * 109.46865 * 30.00419 * 1 2 3 30 30 H 1.08997 * 109.46666 * 149.99827 * 1 2 3 31 31 H 1.08996 * 109.47041 * 245.28622 * 3 2 1 32 32 H 1.09003 * 109.47054 * 5.28577 * 3 2 1 33 33 H 1.08996 * 109.47327 * 125.28579 * 3 2 1 34 34 H 1.09001 * 109.46645 * 299.99755 * 8 6 4 35 35 H 1.08994 * 109.47697 * 59.99382 * 8 6 4 36 36 H 1.09001 * 109.46721 * 179.97438 * 9 8 6 37 37 H 1.08995 * 109.47341 * 59.99722 * 9 8 6 38 38 H 0.96995 * 119.99777 * 264.99930 * 12 10 9 39 39 H 1.09002 * 109.46569 * 60.00175 * 15 13 12 40 40 H 1.08997 * 109.47111 * 300.00291 * 15 13 12 41 41 H 1.07999 * 120.02708 * 359.97438 * 18 17 16 42 42 H 1.08000 * 119.96524 * 180.32098 * 19 18 17 43 43 H 1.08999 * 109.47129 * 239.97891 * 21 20 19 44 44 H 0.96694 * 113.99961 * 300.00782 * 22 21 20 45 45 H 1.48496 * 110.00259 * 180.02562 * 23 21 20 46 46 H 1.48503 * 110.00017 * 301.32297 * 23 21 20 47 47 H 1.07998 * 119.97474 * 180.02562 * 24 20 19 48 48 H 1.08003 * 120.02986 * 180.02562 * 25 24 20 49 49 H 1.09005 * 109.46658 * 59.99798 * 26 10 9 50 50 H 1.09001 * 109.46816 * 179.97438 * 26 10 9 51 51 H 1.09001 * 109.47173 * 60.00717 * 27 6 4 52 52 H 1.08995 * 109.47551 * 300.00338 * 27 6 4 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.1975 1.2688 0.0000 4 6 2.1389 -1.1671 0.0005 5 8 1.5365 -2.2153 -0.0954 6 6 3.6413 -1.1698 0.1202 7 1 4.0508 -0.3208 -0.4272 8 6 4.0355 -1.0642 1.5948 9 6 5.5607 -1.0662 1.7162 10 6 6.1171 -2.3659 1.1314 11 1 5.7079 -3.2150 1.6787 12 7 7.5775 -2.3681 1.2483 13 6 8.1615 -2.7832 2.3898 14 8 7.4781 -3.1545 3.3204 15 6 9.6637 -2.7860 2.5098 16 8 10.0373 -3.2641 3.8035 17 6 11.3670 -3.3291 4.0770 18 6 12.2932 -2.9462 3.1177 19 6 13.6440 -3.0073 3.4004 20 6 14.0736 -3.4615 4.6336 21 6 15.5480 -3.5335 4.9369 22 8 15.8445 -2.7018 6.0605 23 14 16.5158 -2.9465 3.4572 24 6 13.1527 -3.8491 5.5893 25 6 11.8005 -3.7840 5.3138 26 6 5.7228 -2.4716 -0.3431 27 6 4.1971 -2.4698 -0.4645 28 1 -0.3634 0.0000 1.0277 29 1 -0.3633 0.8900 -0.5139 30 1 -0.3632 -0.8900 -0.5139 31 1 2.7512 1.3686 -0.9335 32 1 1.4929 2.0951 0.0947 33 1 2.8933 1.2867 0.8388 34 1 3.6394 -0.1380 2.0113 35 1 3.6259 -1.9130 2.1422 36 1 5.8416 -0.9905 2.7667 37 1 5.9699 -0.2170 1.1690 38 1 8.1239 -2.0708 0.5041 39 1 10.0408 -1.7723 2.3745 40 1 10.0881 -3.4366 1.7451 41 1 11.9583 -2.5963 2.1524 42 1 14.3652 -2.7044 2.6558 43 1 15.8221 -4.5636 5.1649 44 1 15.6256 -1.7693 5.9281 45 1 17.9714 -3.0132 3.7432 46 1 16.1922 -3.7836 2.2740 47 1 13.4907 -4.2031 6.5520 48 1 11.0815 -4.0865 6.0608 49 1 6.1321 -1.6223 -0.8904 50 1 6.1196 -3.3973 -0.7598 51 1 3.9162 -2.5450 -1.5150 52 1 3.7875 -3.3187 0.0829 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310356_2989410.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:01:43 Heat of formation + Delta-G solvation = -109.967238 kcal Electronic energy + Delta-G solvation = -31950.951527 eV Core-core repulsion = 27496.361266 eV Total energy + Delta-G solvation = -4454.590260 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -41.71649 -41.35944 -40.60634 -39.22033 -38.46498 -37.12169 -36.56435 -35.32683 -32.51528 -31.99646 -31.82732 -31.48358 -29.53372 -28.74798 -27.13059 -26.22248 -24.37747 -23.94615 -23.65986 -22.36292 -21.62914 -21.29571 -20.08985 -19.52960 -18.56252 -18.16260 -18.00634 -17.49623 -17.36318 -17.12207 -16.83899 -16.72516 -16.39609 -16.01900 -15.79614 -15.59920 -15.34030 -15.14075 -14.95940 -14.83353 -14.69781 -14.30065 -14.25302 -14.01214 -13.80341 -13.75703 -13.66242 -13.61029 -13.52085 -13.39243 -13.23533 -12.97753 -12.69322 -12.40519 -12.26799 -12.21801 -12.12508 -12.06590 -11.74627 -11.64969 -11.44238 -10.93406 -10.62796 -10.43637 -10.20039 -10.06528 -9.71973 -9.22902 -5.07611 0.27225 0.28151 1.27951 1.40035 1.46244 1.59221 1.61792 1.94912 1.97208 2.50670 2.64608 3.32489 3.43483 3.46635 3.49655 3.53636 3.66936 3.71248 3.83641 3.84951 3.86049 3.88070 3.98033 4.02967 4.06909 4.17942 4.21087 4.24578 4.25778 4.33928 4.35877 4.42644 4.49360 4.50456 4.55271 4.58802 4.62687 4.67849 4.85263 4.87172 4.91003 4.93242 4.99599 5.04961 5.12904 5.14764 5.22186 5.23069 5.35492 5.41065 5.48848 5.66460 6.20295 6.28641 6.34969 6.57452 7.06799 7.16698 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.081 3.919 2 N -0.624 5.624 3 C 0.077 3.923 4 C 0.517 3.483 5 O -0.535 6.535 6 C -0.106 4.106 7 H 0.094 0.906 8 C -0.105 4.105 9 C -0.126 4.126 10 C 0.145 3.855 11 H 0.093 0.907 12 N -0.725 5.725 13 C 0.516 3.484 14 O -0.510 6.510 15 C 0.040 3.960 16 O -0.288 6.288 17 C 0.134 3.866 18 C -0.206 4.206 19 C -0.076 4.076 20 C -0.157 4.157 21 C -0.064 4.064 22 O -0.541 6.541 23 Si 0.687 3.313 24 C -0.051 4.051 25 C -0.145 4.145 26 C -0.125 4.125 27 C -0.099 4.099 28 H 0.055 0.945 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.061 0.939 32 H 0.079 0.921 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.074 0.926 36 H 0.074 0.926 37 H 0.068 0.932 38 H 0.402 0.598 39 H 0.095 0.905 40 H 0.094 0.906 41 H 0.132 0.868 42 H 0.129 0.871 43 H 0.113 0.887 44 H 0.379 0.621 45 H -0.255 1.255 46 H -0.259 1.259 47 H 0.135 0.865 48 H 0.136 0.864 49 H 0.071 0.929 50 H 0.076 0.924 51 H 0.073 0.927 52 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.715 8.055 -5.447 9.874 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.061 4.061 2 N -0.359 5.359 3 C -0.066 4.066 4 C 0.305 3.695 5 O -0.411 6.411 6 C -0.128 4.128 7 H 0.112 0.888 8 C -0.143 4.143 9 C -0.165 4.165 10 C 0.041 3.959 11 H 0.111 0.889 12 N -0.378 5.378 13 C 0.300 3.700 14 O -0.383 6.383 15 C -0.039 4.039 16 O -0.200 6.200 17 C 0.088 3.912 18 C -0.225 4.225 19 C -0.094 4.094 20 C -0.158 4.158 21 C -0.174 4.174 22 O -0.346 6.346 23 Si 0.589 3.411 24 C -0.069 4.069 25 C -0.164 4.164 26 C -0.163 4.163 27 C -0.137 4.137 28 H 0.074 0.926 29 H 0.089 0.911 30 H 0.096 0.904 31 H 0.080 0.920 32 H 0.098 0.902 33 H 0.085 0.915 34 H 0.091 0.909 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.087 0.913 38 H 0.236 0.764 39 H 0.113 0.887 40 H 0.112 0.888 41 H 0.149 0.851 42 H 0.147 0.853 43 H 0.130 0.870 44 H 0.226 0.774 45 H -0.180 1.180 46 H -0.184 1.184 47 H 0.152 0.848 48 H 0.154 0.846 49 H 0.090 0.910 50 H 0.095 0.905 51 H 0.092 0.908 52 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 1.510 6.387 -5.044 8.277 hybrid contribution 0.003 -0.022 -0.357 0.358 sum 1.512 6.365 -5.400 8.483 Atomic orbital electron populations 1.21711 0.78977 1.03386 1.02029 1.47788 1.07265 1.06493 1.74321 1.21878 0.97552 0.85245 1.01973 1.20704 0.90069 0.83118 0.75607 1.90715 1.70404 1.31189 1.48777 1.21405 0.91495 1.00988 0.98890 0.88782 1.21437 0.95838 1.03336 0.93722 1.21907 0.94777 0.97506 1.02314 1.21074 0.78630 0.99288 0.96909 0.88880 1.45894 1.07893 1.67742 1.16269 1.20037 0.89182 0.77728 0.83015 1.90795 1.64746 1.45039 1.37767 1.22482 0.93820 1.01609 0.86006 1.86178 1.20760 1.80691 1.32396 1.19080 0.81961 0.95733 0.94390 1.21167 0.93490 1.07910 0.99922 1.20783 0.95147 0.97567 0.95874 1.20253 0.96339 1.04187 0.95017 1.24978 0.94943 0.98317 0.99211 1.86501 1.86721 1.22579 1.38830 0.94827 0.79408 0.90648 0.76192 1.20858 0.91153 0.95831 0.99056 1.20542 0.96199 1.04144 0.95495 1.21827 0.96536 1.03139 0.94773 1.21338 0.93613 0.96803 1.01950 0.92605 0.91099 0.90351 0.92037 0.90203 0.91537 0.90943 0.90709 0.90682 0.91283 0.76398 0.88677 0.88771 0.85060 0.85328 0.86973 0.77391 1.17998 1.18399 0.84751 0.84637 0.91026 0.90534 0.90801 0.90152 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.04 10.43 59.85 0.62 0.58 16 2 N -0.62 0.08 3.27 -189.51 -0.62 -0.54 16 3 C 0.08 -0.27 9.46 59.85 0.57 0.29 16 4 C 0.52 0.97 6.79 -10.98 -0.07 0.90 16 5 O -0.53 -3.23 15.62 5.56 0.09 -3.15 16 6 C -0.11 0.13 1.78 -91.77 -0.16 -0.03 16 7 H 0.09 -0.31 6.94 -51.93 -0.36 -0.67 16 8 C -0.10 0.13 5.09 -26.73 -0.14 0.00 16 9 C -0.13 0.22 5.49 -26.73 -0.15 0.07 16 10 C 0.14 -0.21 2.45 -67.93 -0.17 -0.38 16 11 H 0.09 0.12 7.58 -51.93 -0.39 -0.28 16 12 N -0.72 1.81 5.08 -53.80 -0.27 1.54 16 13 C 0.52 0.38 7.87 -10.98 -0.09 0.29 16 14 O -0.51 -3.00 16.16 -14.35 -0.23 -3.23 16 15 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 16 O -0.29 -0.70 9.67 -39.36 -0.38 -1.08 16 17 C 0.13 0.19 6.69 -39.22 -0.26 -0.07 16 18 C -0.21 0.15 9.04 -39.43 -0.36 -0.21 16 19 C -0.08 0.06 8.66 -39.61 -0.34 -0.28 16 20 C -0.16 -0.01 5.39 -104.60 -0.56 -0.58 16 21 C -0.06 0.02 2.82 36.01 0.10 0.12 16 22 O -0.54 -0.09 12.77 -35.23 -0.45 -0.54 16 23 Si 0.69 -0.93 29.78 -169.99 -5.06 -6.00 16 24 C -0.05 -0.04 9.60 -39.60 -0.38 -0.42 16 25 C -0.15 -0.23 9.99 -39.43 -0.39 -0.62 16 26 C -0.12 0.37 5.39 -26.71 -0.14 0.23 16 27 C -0.10 0.09 4.71 -26.71 -0.13 -0.04 16 28 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 29 H 0.07 -0.19 7.97 -51.93 -0.41 -0.60 16 30 H 0.08 0.10 7.36 -51.93 -0.38 -0.28 16 31 H 0.06 -0.27 7.83 -51.93 -0.41 -0.68 16 32 H 0.08 -0.37 7.84 -51.93 -0.41 -0.78 16 33 H 0.07 -0.29 6.34 -51.93 -0.33 -0.62 16 34 H 0.07 -0.15 6.72 -51.93 -0.35 -0.49 16 35 H 0.07 0.05 8.14 -51.93 -0.42 -0.37 16 36 H 0.07 0.02 8.14 -51.93 -0.42 -0.40 16 37 H 0.07 -0.22 8.14 -51.93 -0.42 -0.65 16 38 H 0.40 -2.34 8.60 -40.82 -0.35 -2.69 16 39 H 0.10 -0.41 7.67 -51.93 -0.40 -0.81 16 40 H 0.09 -0.37 7.65 -51.93 -0.40 -0.77 16 41 H 0.13 -0.46 6.30 -52.49 -0.33 -0.79 16 42 H 0.13 -0.37 4.87 -52.49 -0.26 -0.63 16 43 H 0.11 0.02 7.96 -51.93 -0.41 -0.39 16 44 H 0.38 -1.40 8.70 45.56 0.40 -1.00 16 45 H -0.25 -0.52 7.11 56.52 0.40 -0.12 16 46 H -0.26 -0.22 7.11 56.52 0.40 0.18 16 47 H 0.13 0.01 8.06 -52.49 -0.42 -0.41 16 48 H 0.14 0.17 8.06 -52.48 -0.42 -0.26 16 49 H 0.07 -0.32 8.14 -51.93 -0.42 -0.75 16 50 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 51 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 52 H 0.08 0.09 7.88 -51.93 -0.41 -0.32 16 LS Contribution 414.78 15.07 6.25 6.25 Total: 0.00 -12.15 414.78 -10.75 -22.90 By element: Atomic # 1 Polarization: -7.94 SS G_CDS: -8.20 Total: -16.14 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -1.86 Total: -0.01 kcal Atomic # 7 Polarization: 1.89 SS G_CDS: -0.89 Total: 0.99 kcal Atomic # 8 Polarization: -7.02 SS G_CDS: -0.98 Total: -8.00 kcal Atomic # 14 Polarization: -0.93 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -12.15 -10.75 -22.90 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_2989410.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -87.067 kcal (2) G-P(sol) polarization free energy of solvation -12.151 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -99.218 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.749 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.900 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.967 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds