Wall clock time and date at job start Sun Mar 7 2021 09:02:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46492 * 120.00353 * 2 1 4 4 C 1.34783 * 119.99814 * 180.02562 * 2 1 3 5 5 O 1.21285 * 119.99985 * 3.70460 * 4 2 1 6 6 C 1.50702 * 119.99793 * 183.70922 * 4 2 1 7 7 H 1.08999 * 109.47113 * 322.98779 * 6 4 2 8 8 C 1.52997 * 109.47446 * 82.98943 * 6 4 2 9 9 C 1.52991 * 109.47240 * 179.97438 * 8 6 4 10 10 C 1.52999 * 109.47599 * 300.00211 * 9 8 6 11 11 H 1.08999 * 109.46953 * 299.99849 * 10 9 8 12 12 N 1.46494 * 109.47270 * 179.97438 * 10 9 8 13 13 C 1.34776 * 120.00153 * 85.00237 * 12 10 9 14 14 O 1.21288 * 119.99646 * 359.97438 * 13 12 10 15 15 C 1.50702 * 120.00442 * 180.02562 * 13 12 10 16 16 O 1.42904 * 109.47059 * 180.02562 * 15 13 12 17 17 C 1.35905 * 116.99521 * 179.97438 * 16 15 13 18 18 C 1.38713 * 120.04924 * 179.97438 * 17 16 15 19 19 C 1.38168 * 119.93645 * 179.72348 * 18 17 16 20 20 C 1.50703 * 119.96618 * 180.25212 * 19 18 17 21 21 O 1.42900 * 109.47120 * 65.00140 * 20 19 18 22 22 Si 1.86301 * 109.46789 * 185.00044 * 20 19 18 23 23 C 1.38240 * 120.06006 * 0.27093 * 19 18 17 24 24 C 1.38292 * 120.11083 * 359.97438 * 23 19 18 25 25 C 1.38120 * 120.05561 * 359.96875 * 24 23 19 26 26 C 1.52998 * 109.46689 * 59.99861 * 10 9 8 27 27 C 1.52998 * 109.47441 * 299.99948 * 26 10 9 28 28 H 1.08999 * 109.47422 * 270.00053 * 1 2 3 29 29 H 1.09001 * 109.46822 * 29.99860 * 1 2 3 30 30 H 1.09000 * 109.46953 * 149.99921 * 1 2 3 31 31 H 1.09000 * 109.47867 * 174.64977 * 3 2 1 32 32 H 1.09003 * 109.47507 * 294.65354 * 3 2 1 33 33 H 1.09001 * 109.47064 * 54.65493 * 3 2 1 34 34 H 1.08994 * 109.46986 * 300.00566 * 8 6 4 35 35 H 1.09007 * 109.46498 * 59.99908 * 8 6 4 36 36 H 1.09004 * 109.47552 * 179.97438 * 9 8 6 37 37 H 1.09007 * 109.47079 * 60.00718 * 9 8 6 38 38 H 0.97001 * 120.00332 * 264.99725 * 12 10 9 39 39 H 1.08999 * 109.47055 * 59.99585 * 15 13 12 40 40 H 1.09006 * 109.46770 * 299.99831 * 15 13 12 41 41 H 1.07997 * 120.03181 * 359.97438 * 18 17 16 42 42 H 1.09004 * 109.47218 * 304.99580 * 20 19 18 43 43 H 0.96693 * 114.00549 * 60.00057 * 21 20 19 44 44 H 1.48505 * 110.00036 * 180.02562 * 22 20 19 45 45 H 1.48504 * 110.00022 * 301.31712 * 22 20 19 46 46 H 1.08001 * 119.94308 * 179.97438 * 23 19 18 47 47 H 1.07995 * 119.97153 * 179.97438 * 24 23 19 48 48 H 1.08002 * 120.02710 * 180.02562 * 25 24 23 49 49 H 1.08999 * 109.47433 * 60.00282 * 26 10 9 50 50 H 1.09004 * 109.46952 * 180.02562 * 26 10 9 51 51 H 1.08996 * 109.47542 * 180.02562 * 27 26 10 52 52 H 1.08999 * 109.47080 * 300.00550 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2686 0.0000 4 6 2.1389 -1.1673 -0.0005 5 8 1.5343 -2.2165 -0.0689 6 6 3.6435 -1.1687 0.0839 7 1 4.0402 -0.3286 -0.4862 8 6 4.0724 -1.0401 1.5469 9 6 5.5999 -1.0422 1.6326 10 6 6.1414 -2.3517 1.0556 11 1 5.7445 -3.1916 1.6257 12 7 7.6041 -2.3533 1.1371 13 6 8.2154 -2.7505 2.2707 14 8 7.5545 -3.1061 3.2235 15 6 9.7201 -2.7517 2.3549 16 8 10.1246 -3.2105 3.6464 17 6 11.4604 -3.2726 3.8886 18 6 11.9233 -3.7086 5.1214 19 6 13.2820 -3.7763 5.3631 20 6 13.7858 -4.2552 6.7002 21 8 13.4256 -5.6261 6.8818 22 14 15.6402 -4.0870 6.7617 23 6 14.1797 -3.4047 4.3796 24 6 13.7205 -2.9649 3.1515 25 6 12.3633 -2.8965 2.9044 26 6 5.7125 -2.4801 -0.4074 27 6 4.1850 -2.4781 -0.4932 28 1 -0.3634 0.0000 1.0276 29 1 -0.3633 0.8900 -0.5138 30 1 -0.3633 -0.8900 -0.5139 31 1 3.2653 1.0717 0.0958 32 1 2.0080 1.7977 -0.9340 33 1 1.8644 1.8805 0.8383 34 1 3.6863 -0.1075 1.9581 35 1 3.6757 -1.8803 2.1169 36 1 5.9055 -0.9502 2.6749 37 1 5.9970 -0.2022 1.0625 38 1 8.1327 -2.0686 0.3753 39 1 10.0937 -1.7403 2.1947 40 1 10.1262 -3.4144 1.5906 41 1 11.2225 -3.9987 5.8901 42 1 13.3400 -3.6543 7.4929 43 1 13.7884 -6.2203 6.2107 44 1 16.1495 -4.5566 8.0752 45 1 16.2583 -4.8762 5.6661 46 1 15.2413 -3.4579 4.5707 47 1 14.4238 -2.6748 2.3850 48 1 12.0053 -2.5534 1.9450 49 1 6.1095 -1.6402 -0.9776 50 1 6.0980 -3.4132 -0.8184 51 1 3.8794 -2.5701 -1.5354 52 1 3.7880 -3.3180 0.0769 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310356_4860298.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:38 Heat of formation + Delta-G solvation = -106.613040 kcal Electronic energy + Delta-G solvation = -32043.923609 eV Core-core repulsion = 27589.478797 eV Total energy + Delta-G solvation = -4454.444811 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -41.72325 -41.37348 -40.60958 -39.20414 -38.45424 -37.28673 -36.56125 -35.33247 -32.53477 -32.10795 -31.95719 -31.20863 -29.37168 -28.64898 -27.11795 -26.75566 -24.12331 -23.93952 -23.71359 -22.47648 -21.60457 -21.26541 -20.03641 -19.35733 -18.60247 -18.08488 -17.89924 -17.48388 -17.31035 -17.24132 -17.05255 -16.74468 -16.69334 -16.18347 -15.82722 -15.56443 -15.25082 -15.16154 -14.98936 -14.86845 -14.72475 -14.26024 -14.13503 -14.06872 -13.91588 -13.67750 -13.62774 -13.53729 -13.42955 -13.25048 -13.04471 -13.00717 -12.69887 -12.58020 -12.38302 -12.25016 -12.16048 -11.98651 -11.63427 -11.57999 -11.44370 -10.92547 -10.63673 -10.61095 -10.19613 -9.97185 -9.73237 -9.29251 -4.95723 0.17335 0.37963 1.24566 1.43308 1.47033 1.59673 1.62123 1.96216 1.97487 2.51670 2.63568 3.32463 3.39459 3.45313 3.48953 3.53948 3.61306 3.73170 3.83958 3.85115 3.87917 3.89247 3.98722 4.01786 4.11134 4.16881 4.17375 4.25650 4.26483 4.32852 4.34208 4.36130 4.50484 4.52349 4.58520 4.59117 4.63023 4.66408 4.85545 4.87595 4.90639 4.94317 4.98805 5.04831 5.14419 5.20717 5.22363 5.32578 5.35523 5.39784 5.41541 5.62469 6.21769 6.29211 6.36232 6.41483 7.07586 7.16770 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.082 3.918 2 N -0.623 5.623 3 C 0.070 3.930 4 C 0.516 3.484 5 O -0.535 6.535 6 C -0.109 4.109 7 H 0.096 0.904 8 C -0.106 4.106 9 C -0.127 4.127 10 C 0.145 3.855 11 H 0.093 0.907 12 N -0.725 5.725 13 C 0.516 3.484 14 O -0.509 6.509 15 C 0.040 3.960 16 O -0.288 6.288 17 C 0.129 3.871 18 C -0.120 4.120 19 C -0.078 4.078 20 C -0.078 4.078 21 O -0.527 6.527 22 Si 0.692 3.308 23 C -0.155 4.155 24 C -0.073 4.073 25 C -0.206 4.206 26 C -0.125 4.125 27 C -0.098 4.098 28 H 0.056 0.944 29 H 0.070 0.930 30 H 0.078 0.922 31 H 0.083 0.917 32 H 0.062 0.938 33 H 0.066 0.934 34 H 0.072 0.928 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.068 0.932 38 H 0.402 0.598 39 H 0.095 0.905 40 H 0.094 0.906 41 H 0.136 0.864 42 H 0.121 0.879 43 H 0.376 0.624 44 H -0.257 1.257 45 H -0.260 1.260 46 H 0.130 0.870 47 H 0.131 0.869 48 H 0.130 0.870 49 H 0.071 0.929 50 H 0.076 0.924 51 H 0.074 0.926 52 H 0.080 0.920 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.995 7.957 -6.092 10.788 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 N -0.357 5.357 3 C -0.073 4.073 4 C 0.304 3.696 5 O -0.411 6.411 6 C -0.130 4.130 7 H 0.114 0.886 8 C -0.144 4.144 9 C -0.165 4.165 10 C 0.041 3.959 11 H 0.111 0.889 12 N -0.378 5.378 13 C 0.300 3.700 14 O -0.383 6.383 15 C -0.038 4.038 16 O -0.200 6.200 17 C 0.084 3.916 18 C -0.139 4.139 19 C -0.078 4.078 20 C -0.187 4.187 21 O -0.333 6.333 22 Si 0.593 3.407 23 C -0.173 4.173 24 C -0.091 4.091 25 C -0.224 4.224 26 C -0.163 4.163 27 C -0.137 4.137 28 H 0.074 0.926 29 H 0.089 0.911 30 H 0.097 0.903 31 H 0.101 0.899 32 H 0.081 0.919 33 H 0.084 0.916 34 H 0.091 0.909 35 H 0.093 0.907 36 H 0.093 0.907 37 H 0.087 0.913 38 H 0.236 0.764 39 H 0.113 0.887 40 H 0.112 0.888 41 H 0.154 0.846 42 H 0.138 0.862 43 H 0.224 0.776 44 H -0.182 1.182 45 H -0.185 1.185 46 H 0.147 0.853 47 H 0.149 0.851 48 H 0.148 0.852 49 H 0.090 0.910 50 H 0.095 0.905 51 H 0.092 0.908 52 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.456 6.907 -4.673 9.027 hybrid contribution -0.164 -0.538 -1.142 1.273 sum 3.292 6.370 -5.815 9.232 Atomic orbital electron populations 1.21656 0.78950 1.03347 1.02079 1.47773 1.07305 1.06476 1.74175 1.21960 0.97663 0.85273 1.02358 1.20729 0.90074 0.83182 0.75603 1.90719 1.70342 1.31084 1.48941 1.21439 0.91557 1.00937 0.99080 0.88603 1.21450 0.95705 1.03400 0.93857 1.21912 0.94801 0.97431 1.02396 1.21072 0.78506 0.99191 0.97134 0.88864 1.45890 1.07729 1.68487 1.15704 1.20042 0.89059 0.77660 0.83222 1.90800 1.66246 1.45146 1.36097 1.22473 0.93542 1.01752 0.86078 1.86181 1.20198 1.81364 1.32293 1.19048 0.81971 0.96206 0.94421 1.20288 0.95198 1.02843 0.95553 1.20091 0.92915 0.98646 0.96162 1.25108 1.12564 0.84703 0.96353 1.86625 1.75592 1.16338 1.54780 0.94895 0.73802 0.91919 0.80091 1.20993 0.99240 1.03117 0.93950 1.20903 0.94744 0.96782 0.96666 1.21297 0.94128 1.07398 0.99614 1.21821 0.96414 1.03133 0.94922 1.21329 0.93640 0.96633 1.02080 0.92579 0.91110 0.90344 0.89874 0.91910 0.91555 0.90909 0.90656 0.90652 0.91306 0.76406 0.88736 0.88820 0.84628 0.86169 0.77616 1.18205 1.18520 0.85302 0.85112 0.85248 0.91027 0.90513 0.90767 0.90136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.02 10.51 59.85 0.63 0.60 16 2 N -0.62 -0.03 3.27 -189.52 -0.62 -0.65 16 3 C 0.07 -0.24 10.25 59.84 0.61 0.38 16 4 C 0.52 1.02 6.80 -10.98 -0.07 0.94 16 5 O -0.53 -3.28 15.62 5.55 0.09 -3.19 16 6 C -0.11 0.13 1.66 -91.77 -0.15 -0.02 16 7 H 0.10 -0.32 6.36 -51.93 -0.33 -0.65 16 8 C -0.11 0.13 5.01 -26.74 -0.13 -0.01 16 9 C -0.13 0.21 5.49 -26.74 -0.15 0.06 16 10 C 0.14 -0.19 2.45 -67.93 -0.17 -0.36 16 11 H 0.09 0.13 7.58 -51.93 -0.39 -0.26 16 12 N -0.72 1.67 5.08 -53.81 -0.27 1.40 16 13 C 0.52 0.52 7.87 -10.98 -0.09 0.43 16 14 O -0.51 -3.16 16.16 -14.36 -0.23 -3.39 16 15 C 0.04 -0.05 5.22 36.01 0.19 0.14 16 16 O -0.29 -0.84 9.67 -39.35 -0.38 -1.22 16 17 C 0.13 0.24 6.69 -39.22 -0.26 -0.03 16 18 C -0.12 -0.27 9.62 -39.43 -0.38 -0.65 16 19 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 20 C -0.08 -0.02 2.80 36.01 0.10 0.08 16 21 O -0.53 -1.03 12.83 -35.23 -0.45 -1.48 16 22 Si 0.69 -0.64 29.88 -169.99 -5.08 -5.72 16 23 C -0.16 0.07 8.67 -39.56 -0.34 -0.27 16 24 C -0.07 0.07 10.04 -39.60 -0.40 -0.32 16 25 C -0.21 0.11 9.04 -39.43 -0.36 -0.24 16 26 C -0.12 0.36 5.39 -26.73 -0.14 0.22 16 27 C -0.10 0.08 4.71 -26.73 -0.13 -0.04 16 28 H 0.06 -0.02 8.14 -51.93 -0.42 -0.45 16 29 H 0.07 -0.17 8.07 -51.93 -0.42 -0.59 16 30 H 0.08 0.11 7.37 -51.93 -0.38 -0.27 16 31 H 0.08 -0.38 4.95 -51.93 -0.26 -0.64 16 32 H 0.06 -0.26 8.14 -51.93 -0.42 -0.68 16 33 H 0.07 -0.26 8.14 -51.93 -0.42 -0.69 16 34 H 0.07 -0.14 7.53 -51.93 -0.39 -0.53 16 35 H 0.07 0.06 8.14 -51.92 -0.42 -0.37 16 36 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 37 H 0.07 -0.22 8.14 -51.92 -0.42 -0.64 16 38 H 0.40 -2.27 8.60 -40.82 -0.35 -2.62 16 39 H 0.09 -0.37 7.66 -51.93 -0.40 -0.77 16 40 H 0.09 -0.34 7.67 -51.93 -0.40 -0.74 16 41 H 0.14 0.40 8.06 -52.49 -0.42 -0.02 16 42 H 0.12 -0.04 7.96 -51.93 -0.41 -0.46 16 43 H 0.38 -0.37 8.70 45.56 0.40 0.03 16 44 H -0.26 -0.62 7.11 56.52 0.40 -0.22 16 45 H -0.26 -0.21 7.01 56.52 0.40 0.19 16 46 H 0.13 -0.27 4.84 -52.49 -0.25 -0.53 16 47 H 0.13 -0.44 8.06 -52.49 -0.42 -0.86 16 48 H 0.13 -0.42 6.30 -52.49 -0.33 -0.75 16 49 H 0.07 -0.32 8.14 -51.93 -0.42 -0.74 16 50 H 0.08 -0.22 8.14 -51.93 -0.42 -0.65 16 51 H 0.07 -0.04 8.14 -51.93 -0.42 -0.47 16 52 H 0.08 0.10 7.88 -51.93 -0.41 -0.31 16 LS Contribution 415.07 15.07 6.26 6.26 Total: 0.00 -12.08 415.07 -10.68 -22.76 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -8.19 Total: -15.07 kcal Atomic # 6 Polarization: 2.10 SS G_CDS: -1.80 Total: 0.30 kcal Atomic # 7 Polarization: 1.65 SS G_CDS: -0.89 Total: 0.75 kcal Atomic # 8 Polarization: -8.30 SS G_CDS: -0.98 Total: -9.28 kcal Atomic # 14 Polarization: -0.64 SS G_CDS: -5.08 Total: -5.72 kcal Total LS contribution 6.26 Total: 6.26 kcal Total: -12.08 -10.68 -22.76 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_4860298.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -83.850 kcal (2) G-P(sol) polarization free energy of solvation -12.084 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.934 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.679 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.763 kcal (6) G-S(sol) free energy of system = (1) + (5) -106.613 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds