Wall clock time and date at job start Sun Mar 7 2021 09:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46498 * 1 3 3 C 1.46492 * 120.00353 * 2 1 4 4 C 1.34783 * 119.99814 * 180.02562 * 2 1 3 5 5 O 1.21285 * 119.99985 * 3.70460 * 4 2 1 6 6 C 1.50702 * 119.99793 * 183.70922 * 4 2 1 7 7 H 1.08999 * 109.47113 * 322.98779 * 6 4 2 8 8 C 1.52997 * 109.47446 * 82.98943 * 6 4 2 9 9 C 1.52991 * 109.47240 * 179.97438 * 8 6 4 10 10 C 1.52999 * 109.47599 * 300.00211 * 9 8 6 11 11 H 1.08999 * 109.46953 * 299.99849 * 10 9 8 12 12 N 1.46494 * 109.47270 * 179.97438 * 10 9 8 13 13 C 1.34776 * 120.00153 * 85.00237 * 12 10 9 14 14 O 1.21288 * 119.99646 * 359.97438 * 13 12 10 15 15 C 1.50702 * 120.00442 * 180.02562 * 13 12 10 16 16 O 1.42904 * 109.47059 * 180.02562 * 15 13 12 17 17 C 1.35905 * 116.99521 * 179.97438 * 16 15 13 18 18 C 1.38713 * 120.04924 * 179.97438 * 17 16 15 19 19 C 1.38168 * 119.93645 * 179.72348 * 18 17 16 20 20 C 1.50703 * 119.96618 * 180.25212 * 19 18 17 21 21 O 1.42900 * 109.47120 * 65.00140 * 20 19 18 22 22 Si 1.86301 * 109.46789 * 185.00044 * 20 19 18 23 23 C 1.38240 * 120.06006 * 0.27093 * 19 18 17 24 24 C 1.38292 * 120.11083 * 359.97438 * 23 19 18 25 25 C 1.38120 * 120.05561 * 359.96875 * 24 23 19 26 26 C 1.52998 * 109.46689 * 59.99861 * 10 9 8 27 27 C 1.52998 * 109.47441 * 299.99948 * 26 10 9 28 28 H 1.08999 * 109.47422 * 270.00053 * 1 2 3 29 29 H 1.09001 * 109.46822 * 29.99860 * 1 2 3 30 30 H 1.09000 * 109.46953 * 149.99921 * 1 2 3 31 31 H 1.09000 * 109.47867 * 174.64977 * 3 2 1 32 32 H 1.09003 * 109.47507 * 294.65354 * 3 2 1 33 33 H 1.09001 * 109.47064 * 54.65493 * 3 2 1 34 34 H 1.08994 * 109.46986 * 300.00566 * 8 6 4 35 35 H 1.09007 * 109.46498 * 59.99908 * 8 6 4 36 36 H 1.09004 * 109.47552 * 179.97438 * 9 8 6 37 37 H 1.09007 * 109.47079 * 60.00718 * 9 8 6 38 38 H 0.97001 * 120.00332 * 264.99725 * 12 10 9 39 39 H 1.08999 * 109.47055 * 59.99585 * 15 13 12 40 40 H 1.09006 * 109.46770 * 299.99831 * 15 13 12 41 41 H 1.07997 * 120.03181 * 359.97438 * 18 17 16 42 42 H 1.09004 * 109.47218 * 304.99580 * 20 19 18 43 43 H 0.96693 * 114.00549 * 60.00057 * 21 20 19 44 44 H 1.48505 * 110.00036 * 180.02562 * 22 20 19 45 45 H 1.48504 * 110.00022 * 301.31712 * 22 20 19 46 46 H 1.08001 * 119.94308 * 179.97438 * 23 19 18 47 47 H 1.07995 * 119.97153 * 179.97438 * 24 23 19 48 48 H 1.08002 * 120.02710 * 180.02562 * 25 24 23 49 49 H 1.08999 * 109.47433 * 60.00282 * 26 10 9 50 50 H 1.09004 * 109.46952 * 180.02562 * 26 10 9 51 51 H 1.08996 * 109.47542 * 180.02562 * 27 26 10 52 52 H 1.08999 * 109.47080 * 300.00550 * 27 26 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.1975 1.2686 0.0000 4 6 2.1389 -1.1673 -0.0005 5 8 1.5343 -2.2165 -0.0689 6 6 3.6435 -1.1687 0.0839 7 1 4.0402 -0.3286 -0.4862 8 6 4.0724 -1.0401 1.5469 9 6 5.5999 -1.0422 1.6326 10 6 6.1414 -2.3517 1.0556 11 1 5.7445 -3.1916 1.6257 12 7 7.6041 -2.3533 1.1371 13 6 8.2154 -2.7505 2.2707 14 8 7.5545 -3.1061 3.2235 15 6 9.7201 -2.7517 2.3549 16 8 10.1246 -3.2105 3.6464 17 6 11.4604 -3.2726 3.8886 18 6 11.9233 -3.7086 5.1214 19 6 13.2820 -3.7763 5.3631 20 6 13.7858 -4.2552 6.7002 21 8 13.4256 -5.6261 6.8818 22 14 15.6402 -4.0870 6.7617 23 6 14.1797 -3.4047 4.3796 24 6 13.7205 -2.9649 3.1515 25 6 12.3633 -2.8965 2.9044 26 6 5.7125 -2.4801 -0.4074 27 6 4.1850 -2.4781 -0.4932 28 1 -0.3634 0.0000 1.0276 29 1 -0.3633 0.8900 -0.5138 30 1 -0.3633 -0.8900 -0.5139 31 1 3.2653 1.0717 0.0958 32 1 2.0080 1.7977 -0.9340 33 1 1.8644 1.8805 0.8383 34 1 3.6863 -0.1075 1.9581 35 1 3.6757 -1.8803 2.1169 36 1 5.9055 -0.9502 2.6749 37 1 5.9970 -0.2022 1.0625 38 1 8.1327 -2.0686 0.3753 39 1 10.0937 -1.7403 2.1947 40 1 10.1262 -3.4144 1.5906 41 1 11.2225 -3.9987 5.8901 42 1 13.3400 -3.6543 7.4929 43 1 13.7884 -6.2203 6.2107 44 1 16.1495 -4.5566 8.0752 45 1 16.2583 -4.8762 5.6661 46 1 15.2413 -3.4579 4.5707 47 1 14.4238 -2.6748 2.3850 48 1 12.0053 -2.5534 1.9450 49 1 6.1095 -1.6402 -0.9776 50 1 6.0980 -3.4132 -0.8184 51 1 3.8794 -2.5701 -1.5354 52 1 3.7880 -3.3180 0.0769 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17310356_4860298.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:02:37 Heat of formation + Delta-G solvation = -109.774191 kcal Electronic energy + Delta-G solvation = -32044.060687 eV Core-core repulsion = 27589.478797 eV Total energy + Delta-G solvation = -4454.581889 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 363.192 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -41.73476 -41.39311 -40.65723 -39.21200 -38.50978 -37.33586 -36.63961 -35.37238 -32.50196 -32.07335 -31.87596 -31.17990 -29.29888 -28.52564 -27.07621 -26.75038 -24.08374 -23.84702 -23.67945 -22.46511 -21.58307 -21.21541 -20.04882 -19.34235 -18.60113 -18.09917 -17.90307 -17.43912 -17.31722 -17.26613 -17.03781 -16.74686 -16.66798 -16.22412 -15.80169 -15.59399 -15.22732 -15.12367 -14.95742 -14.86020 -14.71225 -14.28583 -14.14128 -14.05244 -13.94013 -13.57379 -13.47670 -13.43279 -13.36207 -13.23608 -13.01047 -12.95383 -12.70566 -12.59448 -12.28329 -12.16710 -12.08572 -11.99796 -11.59163 -11.53737 -11.38925 -11.04427 -10.73931 -10.66201 -10.17112 -9.94011 -9.74463 -9.28172 -4.90846 0.21162 0.39803 1.27689 1.44247 1.48963 1.51531 1.61492 1.96901 2.02021 2.58917 2.66973 3.38561 3.41698 3.54664 3.59371 3.61943 3.67131 3.85594 3.94897 4.01268 4.05973 4.07748 4.12703 4.13850 4.25106 4.25401 4.29950 4.36550 4.39700 4.42517 4.44200 4.45510 4.54123 4.59253 4.66039 4.72785 4.78126 4.86066 4.87050 4.96078 4.98801 5.01639 5.10243 5.12523 5.23681 5.25256 5.28482 5.37655 5.43034 5.45479 5.46201 5.70484 6.28824 6.29784 6.45989 6.49247 7.08778 7.14954 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.078 3.922 2 N -0.623 5.623 3 C 0.063 3.937 4 C 0.505 3.495 5 O -0.590 6.590 6 C -0.099 4.099 7 H 0.132 0.868 8 C -0.100 4.100 9 C -0.118 4.118 10 C 0.143 3.857 11 H 0.054 0.946 12 N -0.702 5.702 13 C 0.511 3.489 14 O -0.575 6.575 15 C 0.038 3.962 16 O -0.325 6.325 17 C 0.113 3.887 18 C -0.150 4.150 19 C -0.082 4.082 20 C -0.096 4.096 21 O -0.552 6.552 22 Si 0.787 3.213 23 C -0.159 4.159 24 C -0.070 4.070 25 C -0.200 4.200 26 C -0.111 4.111 27 C -0.099 4.099 28 H 0.054 0.946 29 H 0.096 0.904 30 H 0.054 0.946 31 H 0.099 0.901 32 H 0.077 0.923 33 H 0.076 0.924 34 H 0.085 0.915 35 H 0.042 0.958 36 H 0.051 0.949 37 H 0.101 0.899 38 H 0.423 0.577 39 H 0.130 0.870 40 H 0.124 0.876 41 H 0.110 0.890 42 H 0.118 0.882 43 H 0.386 0.614 44 H -0.306 1.306 45 H -0.275 1.275 46 H 0.148 0.852 47 H 0.163 0.837 48 H 0.162 0.838 49 H 0.106 0.894 50 H 0.079 0.921 51 H 0.074 0.926 52 H 0.046 0.954 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.568 10.816 -9.072 15.570 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.064 4.064 2 N -0.356 5.356 3 C -0.078 4.078 4 C 0.294 3.706 5 O -0.471 6.471 6 C -0.120 4.120 7 H 0.150 0.850 8 C -0.139 4.139 9 C -0.157 4.157 10 C 0.039 3.961 11 H 0.072 0.928 12 N -0.356 5.356 13 C 0.297 3.703 14 O -0.453 6.453 15 C -0.039 4.039 16 O -0.238 6.238 17 C 0.068 3.932 18 C -0.169 4.169 19 C -0.082 4.082 20 C -0.203 4.203 21 O -0.360 6.360 22 Si 0.691 3.309 23 C -0.176 4.176 24 C -0.088 4.088 25 C -0.219 4.219 26 C -0.149 4.149 27 C -0.138 4.138 28 H 0.073 0.927 29 H 0.115 0.885 30 H 0.073 0.927 31 H 0.118 0.882 32 H 0.096 0.904 33 H 0.094 0.906 34 H 0.104 0.896 35 H 0.061 0.939 36 H 0.069 0.931 37 H 0.120 0.880 38 H 0.262 0.738 39 H 0.147 0.853 40 H 0.142 0.858 41 H 0.128 0.872 42 H 0.136 0.864 43 H 0.235 0.765 44 H -0.234 1.234 45 H -0.201 1.201 46 H 0.165 0.835 47 H 0.181 0.819 48 H 0.180 0.820 49 H 0.124 0.876 50 H 0.098 0.902 51 H 0.092 0.908 52 H 0.065 0.935 Dipole moment (debyes) X Y Z Total from point charges 6.027 9.835 -7.722 13.881 hybrid contribution -1.049 -1.423 -0.198 1.779 sum 4.978 8.413 -7.920 12.581 Atomic orbital electron populations 1.21698 0.79240 1.03433 1.02065 1.47975 1.07577 1.07276 1.72724 1.22230 0.98291 0.83695 1.03597 1.21364 0.91428 0.82948 0.74814 1.90690 1.71582 1.33130 1.51663 1.21441 0.89362 1.01939 0.99223 0.84989 1.21386 0.96153 1.02681 0.93682 1.21833 0.94191 0.98180 1.01448 1.20995 0.79047 0.98158 0.97910 0.92800 1.45690 1.07413 1.66992 1.15522 1.20609 0.90149 0.76579 0.82946 1.90779 1.67731 1.48292 1.38544 1.22749 0.91600 1.04310 0.85288 1.86132 1.21053 1.82034 1.34597 1.19204 0.82070 0.97003 0.94878 1.20306 0.95737 1.04913 0.95982 1.20112 0.92496 0.98964 0.96638 1.25486 1.14428 0.83930 0.96504 1.86584 1.76408 1.17430 1.55570 0.93853 0.70558 0.90177 0.76275 1.21251 0.99846 1.02584 0.93949 1.21336 0.95135 0.95386 0.96914 1.21642 0.93940 1.06205 1.00093 1.21736 0.94612 1.04805 0.93740 1.21298 0.95203 0.95834 1.01422 0.92699 0.88535 0.92683 0.88208 0.90444 0.90562 0.89644 0.93890 0.93054 0.88030 0.73812 0.85273 0.85838 0.87186 0.86435 0.76464 1.23435 1.20078 0.83497 0.81922 0.82008 0.87564 0.90216 0.90756 0.93482 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 0.01 10.51 127.77 1.34 1.36 16 2 N -0.62 -0.02 3.27 -871.89 -2.85 -2.88 16 3 C 0.06 -0.55 10.25 127.77 1.31 0.76 16 4 C 0.51 2.57 6.80 87.66 0.60 3.17 16 5 O -0.59 -9.05 15.62 -3.05 -0.05 -9.09 16 6 C -0.10 0.26 1.66 -11.54 -0.02 0.24 16 7 H 0.13 -1.30 6.36 -2.39 -0.02 -1.31 16 8 C -0.10 0.17 5.01 30.59 0.15 0.33 16 9 C -0.12 0.41 5.49 30.59 0.17 0.58 16 10 C 0.14 -0.32 2.45 44.99 0.11 -0.21 16 11 H 0.05 0.33 7.58 -2.39 -0.02 0.32 16 12 N -0.70 3.89 5.08 -442.54 -2.25 1.64 16 13 C 0.51 1.31 7.87 87.66 0.69 2.00 16 14 O -0.58 -8.87 16.16 15.98 0.26 -8.61 16 15 C 0.04 -0.13 5.22 71.24 0.37 0.24 16 16 O -0.32 -2.26 9.67 -73.45 -0.71 -2.97 16 17 C 0.11 0.47 6.69 22.51 0.15 0.62 16 18 C -0.15 -1.01 9.62 22.37 0.22 -0.79 16 19 C -0.08 -0.18 5.35 -19.88 -0.11 -0.29 16 20 C -0.10 -0.18 2.80 71.24 0.20 0.02 16 21 O -0.55 -3.24 12.83 -148.98 -1.91 -5.15 16 22 Si 0.79 -1.53 29.88 68.60 2.05 0.52 16 23 C -0.16 0.37 8.67 22.28 0.19 0.56 16 24 C -0.07 0.33 10.04 22.25 0.22 0.56 16 25 C -0.20 0.66 9.04 22.36 0.20 0.86 16 26 C -0.11 0.77 5.39 30.59 0.16 0.94 16 27 C -0.10 0.10 4.71 30.59 0.14 0.24 16 28 H 0.05 0.01 8.14 -2.39 -0.02 -0.01 16 29 H 0.10 -0.52 8.07 -2.39 -0.02 -0.54 16 30 H 0.05 0.28 7.37 -2.39 -0.02 0.26 16 31 H 0.10 -1.22 4.95 -2.39 -0.01 -1.23 16 32 H 0.08 -0.84 8.14 -2.39 -0.02 -0.86 16 33 H 0.08 -0.77 8.14 -2.39 -0.02 -0.78 16 34 H 0.09 -0.36 7.53 -2.39 -0.02 -0.38 16 35 H 0.04 0.21 8.14 -2.38 -0.02 0.19 16 36 H 0.05 0.11 8.14 -2.38 -0.02 0.09 16 37 H 0.10 -0.98 8.14 -2.38 -0.02 -1.00 16 38 H 0.42 -6.06 8.60 -92.71 -0.80 -6.86 16 39 H 0.13 -1.39 7.66 -2.39 -0.02 -1.41 16 40 H 0.12 -1.21 7.67 -2.38 -0.02 -1.23 16 41 H 0.11 1.14 8.06 -2.91 -0.02 1.12 16 42 H 0.12 0.17 7.96 -2.38 -0.02 0.15 16 43 H 0.39 -0.15 8.70 -74.06 -0.64 -0.79 16 44 H -0.31 -1.88 7.11 99.48 0.71 -1.18 16 45 H -0.27 -0.12 7.01 99.48 0.70 0.58 16 46 H 0.15 -0.95 4.84 -2.91 -0.01 -0.96 16 47 H 0.16 -1.81 8.06 -2.91 -0.02 -1.84 16 48 H 0.16 -1.72 6.30 -2.91 -0.02 -1.73 16 49 H 0.11 -1.39 8.14 -2.39 -0.02 -1.41 16 50 H 0.08 -0.55 8.14 -2.39 -0.02 -0.57 16 51 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 52 H 0.05 0.27 7.88 -2.39 -0.02 0.25 16 Total: 0.00 -36.75 415.07 0.18 -36.57 By element: Atomic # 1 Polarization: -20.73 SS G_CDS: -0.47 Total: -21.20 kcal Atomic # 6 Polarization: 5.06 SS G_CDS: 6.11 Total: 11.17 kcal Atomic # 7 Polarization: 3.87 SS G_CDS: -5.10 Total: -1.23 kcal Atomic # 8 Polarization: -23.42 SS G_CDS: -2.41 Total: -25.83 kcal Atomic # 14 Polarization: -1.53 SS G_CDS: 2.05 Total: 0.52 kcal Total: -36.75 0.18 -36.57 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310356_4860298.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -73.206 kcal (2) G-P(sol) polarization free energy of solvation -36.749 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -109.955 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.181 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.568 kcal (6) G-S(sol) free energy of system = (1) + (5) -109.774 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds