Wall clock time and date at job start Sun Mar 7 2021 09:42:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46502 * 1 3 3 C 1.37652 * 125.67798 * 2 1 4 4 C 1.46675 * 126.23309 * 359.96029 * 3 2 1 5 5 O 1.21698 * 120.00160 * 4.47218 * 4 3 2 6 6 N 1.34777 * 120.00255 * 184.46929 * 4 3 2 7 7 C 1.46502 * 120.00361 * 174.65911 * 6 4 3 8 8 C 1.53001 * 109.47288 * 179.97438 * 7 6 4 9 9 C 1.53577 * 109.46978 * 64.95261 * 8 7 6 10 10 C 1.55149 * 111.28770 * 169.06033 * 9 8 7 11 11 Si 1.89515 * 101.35839 * 331.42225 * 10 9 8 12 12 C 1.86301 * 111.49823 * 245.87156 * 11 10 9 13 13 C 1.86304 * 111.47826 * 120.81753 * 11 10 9 14 14 C 1.55909 * 109.47509 * 184.99940 * 8 7 6 15 15 C 1.37875 * 107.53413 * 179.69959 * 3 2 1 16 16 C 1.39834 * 107.08482 * 0.26519 * 15 3 2 17 17 C 1.35451 * 107.86485 * 359.97438 * 16 15 3 18 18 C 1.50706 * 125.56794 * 180.02562 * 17 16 15 19 19 O 1.42892 * 109.47439 * 209.97868 * 18 17 16 20 20 Si 1.86298 * 109.46787 * 329.97666 * 18 17 16 21 21 H 1.48505 * 109.47455 * 59.99851 * 20 18 17 22 22 H 1.48501 * 109.47509 * 179.97438 * 20 18 17 23 23 H 1.48504 * 109.47300 * 300.00257 * 20 18 17 24 24 H 1.08999 * 109.47165 * 92.91630 * 1 2 3 25 25 H 1.08998 * 109.47288 * 212.92262 * 1 2 3 26 26 H 1.08999 * 109.46972 * 332.91911 * 1 2 3 27 27 H 0.97002 * 119.99815 * 354.65401 * 6 4 3 28 28 H 1.08998 * 109.46709 * 59.99830 * 7 6 4 29 29 H 1.08996 * 109.46587 * 299.99831 * 7 6 4 30 30 H 1.09000 * 109.42946 * 304.97681 * 8 7 6 31 31 H 1.09003 * 109.12442 * 289.54366 * 9 8 7 32 32 H 1.08998 * 109.12357 * 48.57977 * 9 8 7 33 33 H 1.09003 * 111.04861 * 89.43099 * 10 9 8 34 34 H 1.08994 * 111.04750 * 213.35460 * 10 9 8 35 35 H 1.09002 * 109.46867 * 169.73746 * 12 11 10 36 36 H 1.09002 * 109.46915 * 289.73521 * 12 11 10 37 37 H 1.08998 * 109.47379 * 49.73869 * 12 11 10 38 38 H 1.09004 * 109.46830 * 310.27532 * 13 11 10 39 39 H 1.09002 * 109.46609 * 70.27118 * 13 11 10 40 40 H 1.08995 * 109.47054 * 190.27420 * 13 11 10 41 41 H 1.09001 * 111.42340 * 316.88509 * 14 8 7 42 42 H 1.09002 * 111.42494 * 81.76766 * 14 8 7 43 43 H 1.07995 * 126.45534 * 180.22511 * 15 3 2 44 44 H 1.07997 * 126.06781 * 179.97438 * 16 15 3 45 45 H 1.08998 * 109.47328 * 89.97276 * 18 17 16 46 46 H 0.96703 * 113.99960 * 59.99486 * 19 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1182 0.0000 4 6 1.8124 2.5124 -0.0008 5 8 0.6247 2.7647 0.0806 6 7 2.7093 3.5143 -0.0917 7 6 2.2499 4.9003 -0.2104 8 6 3.4597 5.8331 -0.2959 9 6 4.2349 5.5487 -1.5907 10 6 5.3037 6.6409 -1.8589 11 14 4.5181 8.1464 -1.0175 12 6 4.0662 9.4623 -2.2564 13 6 5.6165 8.8286 0.3238 14 6 2.9747 7.3149 -0.2943 15 6 3.5780 0.6888 0.0069 16 6 3.5522 -0.7093 0.0049 17 6 2.2556 -1.1009 -0.0025 18 6 1.7709 -2.5279 -0.0064 19 8 0.5164 -2.6030 -0.6864 20 14 3.0159 -3.6041 -0.8795 21 1 4.3197 -3.5261 -0.1729 22 1 2.5387 -5.0104 -0.8830 23 1 3.1821 -3.1339 -2.2783 24 1 -0.3633 -0.0523 -1.0263 25 1 -0.3634 -0.8626 0.5585 26 1 -0.3633 0.9150 0.4678 27 1 3.6591 3.3177 -0.0783 28 1 1.6517 5.1608 0.6627 29 1 1.6445 5.0065 -1.1106 30 1 4.1102 5.6628 0.5620 31 1 4.7276 4.5800 -1.5065 32 1 3.5359 5.5203 -2.4266 33 1 6.2536 6.3824 -1.3908 34 1 5.4302 6.8107 -2.9280 35 1 3.4585 10.2256 -1.7703 36 1 4.9748 9.9178 -2.6503 37 1 3.5010 9.0137 -3.0732 38 1 5.9358 8.0182 0.9791 39 1 6.4912 9.2978 -0.1266 40 1 5.0650 9.5688 0.9035 41 1 2.1086 7.4510 -0.9420 42 1 2.7702 7.6658 0.7172 43 1 4.4583 1.3144 0.0121 44 1 4.4133 -1.3611 0.0085 45 1 1.6489 -2.8731 1.0203 46 1 0.5501 -2.3106 -1.6075 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_10803936.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:42:25 Heat of formation + Delta-G solvation = -75.952840 kcal Electronic energy + Delta-G solvation = -23700.809707 eV Core-core repulsion = 20327.917222 eV Total energy + Delta-G solvation = -3372.892485 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.42 seconds Orbital eigenvalues (eV) -42.53195 -40.23609 -37.93368 -37.68666 -34.84201 -33.61974 -31.59335 -30.42287 -29.27898 -28.55736 -27.74317 -27.34592 -25.88780 -24.08765 -22.99070 -21.33552 -21.04214 -20.25248 -18.85392 -18.17526 -17.09580 -16.93687 -16.39217 -16.33101 -15.87059 -15.58272 -15.28477 -14.88952 -14.78583 -14.67948 -14.56293 -14.20756 -14.00883 -13.98001 -13.84654 -13.74537 -13.58452 -13.40205 -13.28551 -13.14839 -12.94904 -12.66707 -12.39940 -12.31682 -12.07044 -11.96717 -11.93361 -11.52270 -11.02263 -10.93891 -10.73367 -10.51405 -10.43831 -10.05668 -9.70752 -9.05008 0.46001 1.00443 1.42662 1.47740 1.53189 1.67688 1.72512 1.80250 1.83351 1.96022 2.43219 2.46565 2.50978 3.21451 3.57304 3.68730 3.82663 3.95018 4.01287 4.03820 4.35222 4.39743 4.43853 4.46563 4.48001 4.52941 4.54626 4.64271 4.66849 4.68178 4.68520 4.72868 4.84566 4.90163 4.99551 5.01239 5.07823 5.16678 5.20308 5.33509 5.37479 5.42361 5.46969 5.48973 5.73371 6.01587 6.18075 6.34613 6.53248 7.24926 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.064 3.936 2 N -0.390 5.390 3 C -0.051 4.051 4 C 0.589 3.411 5 O -0.547 6.547 6 N -0.719 5.719 7 C 0.130 3.870 8 C -0.098 4.098 9 C -0.112 4.112 10 C -0.398 4.398 11 Si 0.966 3.034 12 C -0.443 4.443 13 C -0.442 4.442 14 C -0.391 4.391 15 C -0.136 4.136 16 C -0.208 4.208 17 C 0.013 3.987 18 C -0.063 4.063 19 O -0.542 6.542 20 Si 0.979 3.021 21 H -0.247 1.247 22 H -0.252 1.252 23 H -0.250 1.250 24 H 0.075 0.925 25 H 0.094 0.906 26 H 0.102 0.898 27 H 0.403 0.597 28 H 0.071 0.929 29 H 0.070 0.930 30 H 0.080 0.920 31 H 0.061 0.939 32 H 0.065 0.935 33 H 0.076 0.924 34 H 0.078 0.922 35 H 0.070 0.930 36 H 0.069 0.931 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.083 0.917 42 H 0.081 0.919 43 H 0.145 0.855 44 H 0.147 0.853 45 H 0.124 0.876 46 H 0.378 0.622 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.584 0.795 -0.962 3.795 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 N -0.062 5.062 3 C -0.165 4.165 4 C 0.377 3.623 5 O -0.427 6.427 6 N -0.371 5.371 7 C 0.007 3.993 8 C -0.116 4.116 9 C -0.150 4.150 10 C -0.484 4.484 11 Si 1.164 2.836 12 C -0.551 4.551 13 C -0.551 4.551 14 C -0.477 4.477 15 C -0.162 4.162 16 C -0.232 4.232 17 C -0.106 4.106 18 C -0.173 4.173 19 O -0.347 6.347 20 Si 0.799 3.201 21 H -0.170 1.170 22 H -0.175 1.175 23 H -0.174 1.174 24 H 0.093 0.907 25 H 0.112 0.888 26 H 0.120 0.880 27 H 0.238 0.762 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.098 0.902 31 H 0.080 0.920 32 H 0.084 0.916 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.101 0.899 42 H 0.100 0.900 43 H 0.163 0.837 44 H 0.165 0.835 45 H 0.141 0.859 46 H 0.225 0.775 Dipole moment (debyes) X Y Z Total from point charges 2.714 0.322 -0.763 2.837 hybrid contribution 0.295 0.353 -0.182 0.495 sum 3.009 0.675 -0.946 3.225 Atomic orbital electron populations 1.22406 0.75393 1.05807 1.04060 1.43753 1.07056 1.03982 1.51451 1.20056 0.90488 0.87545 1.18447 1.16981 0.85596 0.83538 0.76190 1.90794 1.16317 1.84851 1.50693 1.45714 1.09814 1.06496 1.75116 1.21507 0.96558 0.78702 1.02512 1.21884 0.95992 0.94812 0.98960 1.21776 0.97172 0.99101 0.96910 1.26511 1.02390 1.12541 1.06958 0.80538 0.67812 0.67628 0.67588 1.26021 1.05412 1.12295 1.11401 1.26023 1.09875 1.06628 1.12543 1.26759 1.13332 1.00519 1.07072 1.21270 0.94406 0.95146 1.05379 1.20652 0.95103 0.95509 1.11968 1.21126 0.90939 0.89351 1.09137 1.24907 0.94372 0.94329 1.03660 1.86503 1.30143 1.89014 1.29009 0.85293 0.76795 0.78160 0.79866 1.17038 1.17544 1.17362 0.90682 0.88775 0.87962 0.76199 0.91071 0.91212 0.90172 0.91980 0.91649 0.90533 0.90343 0.91113 0.91203 0.91048 0.91084 0.91135 0.91132 0.89853 0.90031 0.83690 0.83514 0.85887 0.77475 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 0.09 9.39 59.85 0.56 0.66 16 2 N -0.39 -0.96 3.16 -115.62 -0.37 -1.33 16 3 C -0.05 -0.14 6.89 -81.98 -0.56 -0.71 16 4 C 0.59 2.05 7.77 -12.85 -0.10 1.95 16 5 O -0.55 -3.58 14.60 5.19 0.08 -3.50 16 6 N -0.72 -0.33 5.33 -61.62 -0.33 -0.66 16 7 C 0.13 0.02 5.06 -4.04 -0.02 0.00 16 8 C -0.10 0.19 2.21 -88.77 -0.20 -0.01 16 9 C -0.11 0.22 5.14 -25.29 -0.13 0.09 16 10 C -0.40 0.95 5.85 38.29 0.22 1.17 16 11 Si 0.97 -3.25 13.37 -169.99 -2.27 -5.53 16 12 C -0.44 0.88 8.65 101.05 0.87 1.76 16 13 C -0.44 0.98 8.65 101.05 0.87 1.86 16 14 C -0.39 0.90 5.28 38.71 0.20 1.11 16 15 C -0.14 -0.13 10.36 -39.12 -0.41 -0.54 16 16 C -0.21 -0.19 9.37 -39.98 -0.37 -0.56 16 17 C 0.01 0.01 6.14 -81.95 -0.50 -0.49 16 18 C -0.06 0.05 2.89 36.01 0.10 0.15 16 19 O -0.54 0.30 10.47 -35.23 -0.37 -0.07 16 20 Si 0.98 -1.29 26.55 -169.99 -4.51 -5.81 16 21 H -0.25 0.27 6.79 56.52 0.38 0.66 16 22 H -0.25 0.02 7.11 56.52 0.40 0.42 16 23 H -0.25 0.11 7.11 56.52 0.40 0.51 16 24 H 0.07 0.03 8.14 -51.93 -0.42 -0.39 16 25 H 0.09 0.06 7.01 -51.93 -0.36 -0.30 16 26 H 0.10 0.32 6.07 -51.93 -0.32 0.01 16 27 H 0.40 -0.75 6.64 -40.82 -0.27 -1.02 16 28 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 29 H 0.07 0.07 8.10 -51.93 -0.42 -0.35 16 30 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 31 H 0.06 -0.14 7.45 -51.93 -0.39 -0.52 16 32 H 0.06 -0.09 8.06 -51.93 -0.42 -0.51 16 33 H 0.08 -0.18 8.04 -51.93 -0.42 -0.60 16 34 H 0.08 -0.16 8.04 -51.93 -0.42 -0.58 16 35 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 37 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 38 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 39 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 40 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 41 H 0.08 -0.17 8.03 -51.93 -0.42 -0.59 16 42 H 0.08 -0.19 8.06 -51.93 -0.42 -0.61 16 43 H 0.15 -0.26 7.45 -52.49 -0.39 -0.65 16 44 H 0.15 -0.12 6.65 -52.49 -0.35 -0.47 16 45 H 0.12 -0.20 7.96 -51.93 -0.41 -0.61 16 46 H 0.38 -1.18 8.70 45.56 0.40 -0.78 16 LS Contribution 366.62 15.07 5.52 5.52 Total: 0.00 -6.72 366.62 -8.87 -15.58 By element: Atomic # 1 Polarization: -3.49 SS G_CDS: -7.17 Total: -10.65 kcal Atomic # 6 Polarization: 5.89 SS G_CDS: 0.55 Total: 6.44 kcal Atomic # 7 Polarization: -1.29 SS G_CDS: -0.69 Total: -1.98 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -0.29 Total: -3.58 kcal Atomic # 14 Polarization: -4.55 SS G_CDS: -6.79 Total: -11.34 kcal Total LS contribution 5.52 Total: 5.52 kcal Total: -6.72 -8.87 -15.58 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_10803936.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -60.370 kcal (2) G-P(sol) polarization free energy of solvation -6.716 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.086 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.866 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.582 kcal (6) G-S(sol) free energy of system = (1) + (5) -75.953 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.42 seconds