Wall clock time and date at job start Sun Mar 7 2021 09:57:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86299 * 1 3 3 C 1.86309 * 111.23755 * 2 1 4 4 C 1.89330 * 111.46206 * 125.06555 * 2 1 3 5 5 C 1.55147 * 101.34926 * 120.85695 * 4 2 1 6 6 C 1.53576 * 111.28868 * 331.41380 * 5 4 2 7 7 C 1.52993 * 109.47002 * 169.06522 * 6 5 4 8 8 N 1.46498 * 109.47534 * 66.45396 * 7 6 5 9 9 C 1.34781 * 119.99941 * 179.97438 * 8 7 6 10 10 O 1.21553 * 120.00281 * 0.02562 * 9 8 7 11 11 C 1.47845 * 119.99757 * 179.97438 * 9 8 7 12 12 C 1.39558 * 120.14148 * 180.02562 * 11 9 8 13 13 C 1.37983 * 119.87481 * 179.97438 * 12 11 9 14 14 C 1.50702 * 119.91937 * 180.02562 * 13 12 11 15 15 O 1.42895 * 109.47497 * 299.97014 * 14 13 12 16 16 Si 1.86303 * 109.46970 * 179.97438 * 14 13 12 17 17 H 1.48497 * 109.47283 * 300.00118 * 16 14 13 18 18 H 1.48501 * 109.47092 * 59.99873 * 16 14 13 19 19 H 1.48501 * 109.47111 * 179.97438 * 16 14 13 20 20 C 1.38318 * 120.15634 * 359.97438 * 13 12 11 21 21 C 1.38465 * 120.28303 * 0.02562 * 20 13 12 22 22 Br 1.89103 * 119.93528 * 179.97438 * 21 20 13 23 23 C 1.38029 * 120.12477 * 359.97438 * 21 20 13 24 24 C 1.55912 * 109.50636 * 49.03863 * 6 5 4 25 25 H 1.08997 * 109.47343 * 294.93355 * 1 2 3 26 26 H 1.09000 * 109.46948 * 54.93420 * 1 2 3 27 27 H 1.08999 * 109.46585 * 174.93273 * 1 2 3 28 28 H 1.09003 * 109.46645 * 185.06313 * 3 2 1 29 29 H 1.08992 * 109.46877 * 305.06510 * 3 2 1 30 30 H 1.08997 * 109.46777 * 65.07136 * 3 2 1 31 31 H 1.09009 * 111.04424 * 2.83681 * 4 2 1 32 32 H 1.09006 * 111.08275 * 238.89391 * 4 2 1 33 33 H 1.09005 * 109.12012 * 210.93618 * 5 4 2 34 34 H 1.08993 * 109.12524 * 91.89926 * 5 4 2 35 35 H 1.09007 * 109.47083 * 289.06132 * 6 5 4 36 36 H 1.09000 * 109.47220 * 306.45172 * 7 6 5 37 37 H 1.09004 * 109.47403 * 186.45861 * 7 6 5 38 38 H 0.96996 * 119.99717 * 359.97438 * 8 7 6 39 39 H 1.08001 * 120.06351 * 359.95529 * 12 11 9 40 40 H 1.08999 * 109.47275 * 59.97403 * 14 13 12 41 41 H 0.96700 * 114.00596 * 180.02562 * 15 14 13 42 42 H 1.07997 * 119.85637 * 180.27995 * 20 13 12 43 43 H 1.08000 * 120.07878 * 179.97438 * 23 21 20 44 44 H 1.08999 * 111.42554 * 76.90691 * 24 6 5 45 45 H 1.08997 * 111.42671 * 201.84753 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5379 1.7366 0.0000 4 6 2.5557 -1.0123 1.4422 5 6 3.3935 -2.0804 0.6909 6 6 2.8149 -2.3636 -0.7032 7 6 3.8087 -3.2047 -1.5066 8 7 3.9331 -4.5302 -0.8952 9 6 4.7591 -5.4473 -1.4367 10 8 5.4013 -5.1744 -2.4320 11 6 4.8850 -6.7847 -0.8193 12 6 5.7398 -7.7364 -1.3771 13 6 5.8535 -8.9828 -0.7961 14 6 6.7767 -10.0110 -1.3973 15 8 6.3698 -10.2906 -2.7383 16 14 6.7054 -11.5753 -0.3880 17 1 7.1282 -11.2850 1.0056 18 1 5.3159 -12.0993 -0.3846 19 1 7.6146 -12.5888 -0.9808 20 6 5.1229 -9.2902 0.3374 21 6 4.2728 -8.3510 0.8963 22 35 3.2780 -8.7821 2.4457 23 6 4.1502 -7.1006 0.3247 24 6 2.5569 -1.0158 -1.4434 25 1 -0.3634 0.4332 0.9318 26 1 -0.3633 0.5904 -0.8411 27 1 -0.3632 -1.0237 -0.0908 28 1 3.6236 1.7043 -0.0907 29 1 2.1192 2.2890 -0.8411 30 1 2.2657 2.2321 0.9319 31 1 1.7533 -1.4764 2.0158 32 1 3.1882 -0.3987 2.0838 33 1 3.3972 -3.0037 1.2703 34 1 4.4176 -1.7223 0.5865 35 1 1.8758 -2.9080 -0.6031 36 1 4.7816 -2.7132 -1.5095 37 1 3.4515 -3.3092 -2.5311 38 1 3.4209 -4.7477 -0.1007 39 1 6.3111 -7.4979 -2.2621 40 1 7.7966 -9.6264 -1.3998 41 1 6.9204 -10.9460 -3.1880 42 1 5.2189 -10.2657 0.7908 43 1 3.4866 -6.3687 0.7610 44 1 3.4839 -0.5864 -1.8232 45 1 1.8204 -1.1328 -2.2383 RHF calculation, no. of doubly occupied orbitals= 58 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_12335870.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 09:57:34 Heat of formation + Delta-G solvation = -91.633346 kcal Electronic energy + Delta-G solvation = -24593.394732 eV Core-core repulsion = 20972.741675 eV Total energy + Delta-G solvation = -3620.653056 eV No. of doubly occupied orbitals = 58 Molecular weight (most abundant/longest-lived isotopes) = 385.062 amu Computer time = 0.52 seconds Orbital eigenvalues (eV) -41.47247 -39.95105 -37.92864 -37.67860 -34.84141 -33.64439 -33.10344 -30.56427 -30.45124 -29.28458 -28.55861 -27.45719 -26.93372 -24.83402 -23.93637 -22.66124 -21.39384 -20.82298 -18.90635 -18.61965 -17.64035 -17.55751 -16.68573 -16.43138 -16.16374 -15.83211 -15.55768 -15.28698 -14.89501 -14.78620 -14.68534 -14.42845 -14.19868 -14.01857 -13.97336 -13.75070 -13.66304 -13.59836 -13.37718 -13.25680 -12.77413 -12.68981 -12.45825 -12.32936 -12.14393 -12.00389 -11.96140 -11.84655 -11.54422 -11.48904 -11.06324 -10.94066 -10.59624 -10.51842 -10.45541 -10.23852 -10.02384 -9.87347 -0.46316 -0.13420 0.41197 0.98824 1.31676 1.38612 1.52765 1.64664 1.79140 1.79562 1.82587 2.09023 2.48010 2.54546 3.10793 3.38515 3.55586 3.70910 3.76022 3.89542 3.90950 3.98443 4.00893 4.12540 4.30330 4.42188 4.44011 4.46332 4.52046 4.64027 4.66235 4.67979 4.68710 4.71717 4.75940 4.87595 4.96660 4.98388 5.06613 5.12171 5.18685 5.28488 5.36311 5.38429 5.42726 5.46771 5.47556 6.40994 6.46392 7.15228 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.443 4.443 2 Si 0.967 3.033 3 C -0.443 4.443 4 C -0.399 4.399 5 C -0.112 4.112 6 C -0.099 4.099 7 C 0.127 3.873 8 N -0.726 5.726 9 C 0.560 3.440 10 O -0.528 6.528 11 C -0.127 4.127 12 C -0.013 4.013 13 C -0.074 4.074 14 C -0.081 4.081 15 O -0.542 6.542 16 Si 0.935 3.065 17 H -0.245 1.245 18 H -0.243 1.243 19 H -0.249 1.249 20 C -0.071 4.071 21 C -0.093 4.093 22 Br -0.034 7.034 23 C -0.055 4.055 24 C -0.390 4.390 25 H 0.070 0.930 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.071 0.929 29 H 0.069 0.931 30 H 0.069 0.931 31 H 0.076 0.924 32 H 0.078 0.922 33 H 0.060 0.940 34 H 0.066 0.934 35 H 0.080 0.920 36 H 0.072 0.928 37 H 0.072 0.928 38 H 0.400 0.600 39 H 0.149 0.851 40 H 0.085 0.915 41 H 0.384 0.616 42 H 0.136 0.864 43 H 0.138 0.862 44 H 0.083 0.917 45 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.457 0.479 2.226 2.322 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.165 2.835 3 C -0.551 4.551 4 C -0.485 4.485 5 C -0.150 4.150 6 C -0.117 4.117 7 C 0.004 3.996 8 N -0.378 5.378 9 C 0.347 3.653 10 O -0.405 6.405 11 C -0.131 4.131 12 C -0.033 4.033 13 C -0.075 4.075 14 C -0.192 4.192 15 O -0.348 6.348 16 Si 0.756 3.244 17 H -0.169 1.169 18 H -0.166 1.166 19 H -0.173 1.173 20 C -0.091 4.091 21 C -0.172 4.172 22 Br 0.052 6.948 23 C -0.075 4.075 24 C -0.477 4.477 25 H 0.089 0.911 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.090 0.910 29 H 0.089 0.911 30 H 0.088 0.912 31 H 0.095 0.905 32 H 0.097 0.903 33 H 0.079 0.921 34 H 0.084 0.916 35 H 0.098 0.902 36 H 0.090 0.910 37 H 0.091 0.909 38 H 0.235 0.765 39 H 0.167 0.833 40 H 0.102 0.898 41 H 0.232 0.768 42 H 0.153 0.847 43 H 0.156 0.844 44 H 0.102 0.898 45 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -0.896 0.256 2.729 2.883 hybrid contribution 0.408 -0.161 -0.253 0.506 sum -0.488 0.095 2.476 2.525 Atomic orbital electron populations 1.26025 1.19977 1.04559 1.04535 0.80515 0.67535 0.67486 0.67950 1.26022 1.06655 1.17975 1.04480 1.26502 1.05169 1.06649 1.10183 1.21781 0.99903 0.99202 0.94103 1.21895 0.98609 0.96548 0.94692 1.21545 0.99925 0.81086 0.97052 1.46005 1.45603 1.14333 1.31878 1.18081 0.79604 0.83911 0.83728 1.90820 1.44976 1.79699 1.24970 1.19975 1.00768 0.95232 0.97152 1.21265 0.93901 0.90430 0.97668 1.19237 0.98261 0.94829 0.95162 1.24695 0.98809 1.05455 0.90204 1.86503 1.58419 1.65216 1.24685 0.85893 0.82303 0.76594 0.79576 1.16878 1.16568 1.17288 1.21160 0.93816 0.98871 0.95267 1.21563 1.01719 0.96780 0.97169 1.96827 1.71165 1.94088 1.32763 1.21262 0.97252 0.95020 0.94003 1.26757 1.06830 1.03780 1.10298 0.91112 0.91141 0.91101 0.91028 0.91139 0.91179 0.90526 0.90301 0.92112 0.91563 0.90204 0.90974 0.90946 0.76478 0.83288 0.89750 0.76767 0.84696 0.84383 0.89796 0.89991 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.98 8.65 101.05 0.87 1.86 16 2 Si 0.97 -3.29 13.36 -169.99 -2.27 -5.57 16 3 C -0.44 0.89 8.65 101.05 0.87 1.77 16 4 C -0.40 0.97 5.85 38.29 0.22 1.19 16 5 C -0.11 0.23 5.16 -25.30 -0.13 0.10 16 6 C -0.10 0.20 2.19 -88.77 -0.19 0.01 16 7 C 0.13 -0.01 5.05 -4.05 -0.02 -0.03 16 8 N -0.73 0.01 5.32 -61.25 -0.33 -0.32 16 9 C 0.56 1.58 7.77 -12.33 -0.10 1.48 16 10 O -0.53 -3.43 16.35 5.32 0.09 -3.34 16 11 C -0.13 -0.21 5.87 -104.97 -0.62 -0.82 16 12 C -0.01 -0.03 9.15 -39.18 -0.36 -0.39 16 13 C -0.07 -0.08 5.42 -104.69 -0.57 -0.64 16 14 C -0.08 0.07 2.81 36.01 0.10 0.17 16 15 O -0.54 0.12 12.74 -35.23 -0.45 -0.33 16 16 Si 0.93 -1.05 25.06 -169.99 -4.26 -5.31 16 17 H -0.25 0.18 7.11 56.52 0.40 0.58 16 18 H -0.24 -0.06 7.11 56.52 0.40 0.34 16 19 H -0.25 0.27 7.11 56.52 0.40 0.67 16 20 C -0.07 -0.06 8.41 -39.47 -0.33 -0.39 16 21 C -0.09 -0.07 6.22 -39.57 -0.25 -0.31 16 22 Br -0.03 -0.01 33.69 -68.01 -2.29 -2.30 16 23 C -0.05 0.00 9.28 -39.16 -0.36 -0.36 16 24 C -0.39 0.94 5.29 38.71 0.20 1.15 16 25 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 26 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 29 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 30 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 31 H 0.08 -0.19 8.04 -51.92 -0.42 -0.60 16 32 H 0.08 -0.17 8.04 -51.93 -0.42 -0.59 16 33 H 0.06 -0.14 7.55 -51.93 -0.39 -0.53 16 34 H 0.07 -0.10 8.04 -51.93 -0.42 -0.52 16 35 H 0.08 -0.22 8.14 -51.92 -0.42 -0.64 16 36 H 0.07 0.06 8.07 -51.93 -0.42 -0.36 16 37 H 0.07 0.07 8.14 -51.93 -0.42 -0.35 16 38 H 0.40 -0.96 5.87 -40.82 -0.24 -1.20 16 39 H 0.15 0.36 7.65 -52.49 -0.40 -0.04 16 40 H 0.08 -0.23 7.96 -51.93 -0.41 -0.64 16 41 H 0.38 -1.80 8.74 45.56 0.40 -1.40 16 42 H 0.14 -0.02 4.86 -52.49 -0.26 -0.28 16 43 H 0.14 -0.34 6.41 -52.49 -0.34 -0.67 16 44 H 0.08 -0.18 8.03 -51.93 -0.42 -0.60 16 45 H 0.08 -0.20 8.06 -51.93 -0.42 -0.62 16 LS Contribution 384.99 15.07 5.80 5.80 Total: 0.00 -6.73 384.99 -10.62 -17.35 By element: Atomic # 1 Polarization: -4.49 SS G_CDS: -6.27 Total: -10.76 kcal Atomic # 6 Polarization: 5.42 SS G_CDS: -0.65 Total: 4.78 kcal Atomic # 7 Polarization: 0.01 SS G_CDS: -0.33 Total: -0.32 kcal Atomic # 8 Polarization: -3.31 SS G_CDS: -0.36 Total: -3.67 kcal Atomic # 14 Polarization: -4.34 SS G_CDS: -6.53 Total: -10.88 kcal Atomic # 35 Polarization: -0.01 SS G_CDS: -2.29 Total: -2.30 kcal Total LS contribution 5.80 Total: 5.80 kcal Total: -6.73 -10.62 -17.35 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_12335870.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -74.280 kcal (2) G-P(sol) polarization free energy of solvation -6.731 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -81.010 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.623 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.354 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.633 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.52 seconds