Wall clock time and date at job start Sun Mar 7 2021 10:01:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50703 * 1 3 3 C 1.39281 * 121.03362 * 2 1 4 4 C 1.46497 * 134.19639 * 359.95404 * 3 2 1 5 5 C 1.50704 * 126.60363 * 0.02562 * 4 3 2 6 6 O 1.42896 * 109.46838 * 284.99960 * 5 4 3 7 7 Si 1.86297 * 109.47204 * 165.00127 * 5 4 3 8 8 H 1.48491 * 109.47467 * 59.99807 * 7 5 4 9 9 H 1.48500 * 109.47018 * 180.02562 * 7 5 4 10 10 H 1.48503 * 109.47260 * 299.99832 * 7 5 4 11 11 C 1.34183 * 106.80072 * 180.02562 * 4 3 2 12 12 N 1.36947 * 109.94977 * 359.97438 * 11 4 3 13 13 C 1.37152 * 110.11381 * 359.97438 * 12 11 4 14 14 N 1.32825 * 132.96171 * 179.97438 * 13 12 11 15 15 C 1.31313 * 121.88655 * 179.75074 * 14 13 12 16 16 C 1.39753 * 121.02801 * 179.97438 * 2 1 3 17 17 C 1.47669 * 120.45519 * 359.97438 * 16 2 1 18 18 O 1.21570 * 119.99745 * 354.20394 * 17 16 2 19 19 N 1.34770 * 119.99534 * 174.19871 * 17 16 2 20 20 C 1.46501 * 119.99843 * 180.02562 * 19 17 16 21 21 C 1.52995 * 109.47360 * 180.02562 * 20 19 17 22 22 C 1.53577 * 109.47560 * 64.95573 * 21 20 19 23 23 C 1.55141 * 111.29317 * 169.06352 * 22 21 20 24 24 Si 1.89519 * 101.35869 * 331.41923 * 23 22 21 25 25 C 1.86301 * 111.49941 * 245.87297 * 24 23 22 26 26 C 1.86298 * 111.48081 * 120.81764 * 24 23 22 27 27 C 1.55916 * 109.47496 * 185.00037 * 21 20 19 28 28 H 1.09000 * 109.46753 * 263.78996 * 1 2 3 29 29 H 1.08997 * 109.47025 * 23.79116 * 1 2 3 30 30 H 1.08998 * 109.47040 * 143.79326 * 1 2 3 31 31 H 1.09002 * 109.46767 * 45.00161 * 5 4 3 32 32 H 0.96695 * 114.00721 * 299.99905 * 6 5 4 33 33 H 1.07997 * 125.02384 * 180.02562 * 11 4 3 34 34 H 0.97005 * 124.94278 * 180.02562 * 12 11 4 35 35 H 1.08000 * 119.30827 * 180.28890 * 15 14 13 36 36 H 0.97001 * 120.00750 * 0.02562 * 19 17 16 37 37 H 1.08998 * 109.47034 * 59.99770 * 20 19 17 38 38 H 1.09002 * 109.47186 * 300.00115 * 20 19 17 39 39 H 1.09001 * 109.43104 * 304.97563 * 21 20 19 40 40 H 1.09000 * 109.12149 * 289.54533 * 22 21 20 41 41 H 1.08995 * 109.12113 * 48.57350 * 22 21 20 42 42 H 1.09004 * 111.04863 * 89.42738 * 23 22 21 43 43 H 1.08998 * 111.05251 * 213.35457 * 23 22 21 44 44 H 1.09001 * 109.47276 * 169.73184 * 25 24 23 45 45 H 1.08991 * 109.47228 * 289.73883 * 25 24 23 46 46 H 1.09002 * 109.46989 * 49.73703 * 25 24 23 47 47 H 1.08998 * 109.46866 * 310.27793 * 26 24 23 48 48 H 1.09002 * 109.46646 * 70.26951 * 26 24 23 49 49 H 1.08999 * 109.47305 * 190.27510 * 26 24 23 50 50 H 1.09000 * 111.42681 * 316.88223 * 27 21 20 51 51 H 1.09004 * 111.42790 * 81.76950 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2251 1.1934 0.0000 4 6 1.8516 2.6100 -0.0008 5 6 0.4527 3.1705 -0.0015 6 8 -0.1188 3.0233 -1.3029 7 14 0.5071 4.9766 0.4521 8 1 1.3350 5.7110 -0.5379 9 1 -0.8715 5.5287 0.4521 10 1 1.1010 5.1296 1.8046 11 6 2.9948 3.3125 -0.0009 12 7 4.0669 2.4604 0.0004 13 6 3.6348 1.1587 0.0019 14 7 4.2721 -0.0066 0.0031 15 6 3.6266 -1.1502 0.0094 16 6 2.2274 -1.1976 0.0005 17 6 1.5224 -2.4951 0.0017 18 8 0.3119 -2.5290 0.1085 19 7 2.2210 -3.6416 -0.1158 20 6 1.5216 -4.9289 -0.1152 21 6 2.5391 -6.0622 -0.2599 22 6 3.4502 -6.0933 0.9761 23 6 4.3138 -7.3817 1.0072 24 14 3.1996 -8.6005 0.0773 25 6 2.6059 -9.9700 1.1921 26 6 4.0460 -9.2798 -1.4369 27 6 1.7876 -7.4224 -0.3869 28 1 -0.3633 -0.1112 1.0217 29 1 -0.3633 0.9403 -0.4146 30 1 -0.3633 -0.8292 -0.6070 31 1 -0.1550 2.6314 0.7254 32 1 0.3712 3.4782 -2.0015 33 1 3.0599 4.3905 -0.0011 34 1 4.9966 2.7372 0.0009 35 1 4.1869 -2.0735 0.0148 36 1 3.1869 -3.6145 -0.2007 37 1 0.8199 -4.9615 -0.9487 38 1 0.9780 -5.0466 0.8222 39 1 3.1428 -5.8959 -1.1521 40 1 4.1069 -5.2235 0.9576 41 1 2.8344 -6.0543 1.8746 42 1 5.2568 -7.2337 0.4807 43 1 4.4875 -7.7121 2.0312 44 1 1.8312 -10.5432 0.6826 45 1 3.4408 -10.6259 1.4381 46 1 2.1981 -9.5420 2.1078 47 1 4.4600 -8.4581 -2.0212 48 1 4.8497 -9.9509 -1.1335 49 1 3.3237 -9.8280 -2.0418 50 1 0.9633 -7.4897 0.3230 51 1 1.4449 -7.5942 -1.4073 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:01:18 Heat of formation + Delta-G solvation = -49.627245 kcal Electronic energy + Delta-G solvation = -29997.245696 eV Core-core repulsion = 26019.852823 eV Total energy + Delta-G solvation = -3977.392873 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 361.173 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.81116 -40.82003 -38.79747 -37.93588 -37.63726 -35.08612 -34.48281 -31.94188 -31.35614 -30.25183 -29.25641 -28.75882 -28.53368 -27.05000 -26.25423 -24.52535 -24.18898 -23.55108 -21.64394 -20.89088 -20.60379 -19.24317 -18.72536 -17.80604 -17.51181 -17.00022 -16.63921 -16.51353 -16.17040 -15.82538 -15.75257 -15.49993 -15.30850 -14.86521 -14.69788 -14.46467 -14.39587 -14.01713 -13.98522 -13.91277 -13.75005 -13.60910 -13.56500 -13.47007 -13.35148 -13.22618 -13.10224 -12.90096 -12.63260 -12.44106 -12.27035 -12.19924 -11.92567 -11.82550 -11.48864 -11.02365 -10.99145 -10.91609 -10.60088 -10.43420 -10.35800 -10.13253 -9.97450 -9.54032 -9.11108 -0.17761 -0.01909 1.10144 1.33120 1.39514 1.49165 1.56165 1.63531 1.82799 1.85657 1.87885 2.01545 2.24009 2.51426 2.91328 3.31350 3.46217 3.53391 3.62506 3.75555 3.78027 3.86089 3.97798 4.04444 4.11724 4.26860 4.31849 4.47830 4.49705 4.55588 4.59817 4.66311 4.68908 4.70447 4.70871 4.71118 4.77278 4.82546 4.95181 5.02134 5.04281 5.10921 5.11253 5.22842 5.23222 5.35927 5.40045 5.44160 5.48444 5.49143 5.52819 5.65370 5.82765 6.11801 6.56808 6.58992 6.89053 7.34174 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.178 4.178 5 C -0.051 4.051 6 O -0.536 6.536 7 Si 0.946 3.054 8 H -0.251 1.251 9 H -0.248 1.248 10 H -0.249 1.249 11 C 0.060 3.940 12 N -0.570 5.570 13 C 0.307 3.693 14 N -0.505 5.505 15 C 0.180 3.820 16 C -0.233 4.233 17 C 0.570 3.430 18 O -0.530 6.530 19 N -0.729 5.729 20 C 0.129 3.871 21 C -0.098 4.098 22 C -0.112 4.112 23 C -0.398 4.398 24 Si 0.966 3.034 25 C -0.443 4.443 26 C -0.443 4.443 27 C -0.390 4.390 28 H 0.081 0.919 29 H 0.085 0.915 30 H 0.098 0.902 31 H 0.118 0.882 32 H 0.375 0.625 33 H 0.180 0.820 34 H 0.425 0.575 35 H 0.161 0.839 36 H 0.398 0.602 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.079 0.921 40 H 0.060 0.940 41 H 0.065 0.935 42 H 0.075 0.925 43 H 0.077 0.923 44 H 0.070 0.930 45 H 0.068 0.932 46 H 0.070 0.930 47 H 0.070 0.930 48 H 0.069 0.931 49 H 0.069 0.931 50 H 0.083 0.917 51 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.438 0.642 -0.345 3.514 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.078 3.922 3 C -0.154 4.154 4 C -0.186 4.186 5 C -0.162 4.162 6 O -0.341 6.341 7 Si 0.768 3.232 8 H -0.175 1.175 9 H -0.171 1.171 10 H -0.172 1.172 11 C -0.066 4.066 12 N -0.175 5.175 13 C 0.074 3.926 14 N -0.218 5.218 15 C 0.012 3.988 16 C -0.241 4.241 17 C 0.357 3.643 18 O -0.408 6.408 19 N -0.382 5.382 20 C 0.006 3.994 21 C -0.117 4.117 22 C -0.150 4.150 23 C -0.484 4.484 24 Si 1.164 2.836 25 C -0.551 4.551 26 C -0.551 4.551 27 C -0.476 4.476 28 H 0.100 0.900 29 H 0.104 0.896 30 H 0.117 0.883 31 H 0.136 0.864 32 H 0.222 0.778 33 H 0.197 0.803 34 H 0.264 0.736 35 H 0.178 0.822 36 H 0.233 0.767 37 H 0.089 0.911 38 H 0.089 0.911 39 H 0.098 0.902 40 H 0.079 0.921 41 H 0.084 0.916 42 H 0.094 0.906 43 H 0.096 0.904 44 H 0.089 0.911 45 H 0.088 0.912 46 H 0.090 0.910 47 H 0.089 0.911 48 H 0.088 0.912 49 H 0.089 0.911 50 H 0.102 0.898 51 H 0.099 0.901 Dipole moment (debyes) X Y Z Total from point charges 3.173 1.260 0.277 3.425 hybrid contribution 0.815 0.072 -0.383 0.904 sum 3.988 1.331 -0.106 4.206 Atomic orbital electron populations 1.21286 0.88707 1.05142 1.03866 1.19936 0.97245 0.89077 0.85972 1.19442 0.92726 0.93449 1.09828 1.20668 0.95263 0.91195 1.11498 1.24398 0.90938 1.11492 0.89353 1.86527 1.53686 1.77727 1.16151 0.85786 0.82014 0.74329 0.81111 1.17494 1.17079 1.17242 1.21750 0.85290 0.95876 1.03700 1.41484 1.09521 1.02737 1.63799 1.18493 0.89394 0.85842 0.98879 1.66440 1.40572 0.95999 1.18765 1.22504 0.90151 0.94388 0.91804 1.20472 0.94725 0.93909 1.14946 1.17862 0.86843 0.83270 0.76306 1.90758 1.13514 1.87070 1.49414 1.45987 1.10751 1.05995 1.75448 1.21488 0.94700 0.80565 1.02679 1.21887 0.96138 0.94601 0.99090 1.21775 0.97354 0.98086 0.97746 1.26513 1.06102 1.07705 1.08112 0.80537 0.67967 0.67499 0.67569 1.26021 1.06055 1.12916 1.10132 1.26025 1.07695 1.06592 1.14765 1.26750 1.09972 1.05330 1.05571 0.90037 0.89620 0.88334 0.86374 0.77769 0.80299 0.73645 0.82175 0.76689 0.91135 0.91145 0.90241 0.92078 0.91591 0.90571 0.90369 0.91121 0.91240 0.91044 0.91100 0.91169 0.91141 0.89837 0.90057 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.43 8.46 36.01 0.30 -0.13 16 2 C 0.09 0.30 5.98 -103.67 -0.62 -0.32 16 3 C -0.15 -0.42 6.16 -105.13 -0.65 -1.07 16 4 C -0.18 -0.09 5.57 -102.72 -0.57 -0.66 16 5 C -0.05 0.03 1.88 36.01 0.07 0.10 16 6 O -0.54 0.02 11.67 -35.23 -0.41 -0.39 16 7 Si 0.95 -1.65 26.09 -169.99 -4.44 -6.08 16 8 H -0.25 0.61 7.03 56.52 0.40 1.00 16 9 H -0.25 0.00 7.11 56.52 0.40 0.40 16 10 H -0.25 0.25 7.11 56.52 0.40 0.65 16 11 C 0.06 -0.08 10.44 -16.70 -0.17 -0.25 16 12 N -0.57 0.22 6.04 -12.12 -0.07 0.15 16 13 C 0.31 0.81 8.42 -155.71 -1.31 -0.50 16 14 N -0.50 -1.50 10.37 -11.96 -0.12 -1.63 16 15 C 0.18 0.27 10.67 -17.11 -0.18 0.09 16 16 C -0.23 -0.65 5.89 -104.82 -0.62 -1.26 16 17 C 0.57 1.79 7.72 -12.41 -0.10 1.69 16 18 O -0.53 -3.24 13.49 5.30 0.07 -3.17 16 19 N -0.73 -0.12 5.30 -61.31 -0.33 -0.45 16 20 C 0.13 0.01 5.06 -4.04 -0.02 -0.01 16 21 C -0.10 0.19 2.21 -88.76 -0.20 -0.01 16 22 C -0.11 0.21 5.14 -25.30 -0.13 0.08 16 23 C -0.40 0.90 5.85 38.29 0.22 1.13 16 24 Si 0.97 -3.17 13.37 -169.99 -2.27 -5.44 16 25 C -0.44 0.83 8.65 101.05 0.87 1.71 16 26 C -0.44 0.93 8.65 101.05 0.87 1.81 16 27 C -0.39 0.88 5.28 38.72 0.20 1.09 16 28 H 0.08 0.25 8.14 -51.93 -0.42 -0.18 16 29 H 0.09 0.23 4.79 -51.93 -0.25 -0.02 16 30 H 0.10 0.47 5.95 -51.93 -0.31 0.16 16 31 H 0.12 -0.08 7.13 -51.93 -0.37 -0.45 16 32 H 0.38 -1.24 8.70 45.56 0.40 -0.85 16 33 H 0.18 -0.80 6.30 -52.49 -0.33 -1.13 16 34 H 0.42 -1.26 8.96 -40.82 -0.37 -1.62 16 35 H 0.16 -0.32 6.43 -52.49 -0.34 -0.66 16 36 H 0.40 -0.90 5.82 -40.82 -0.24 -1.14 16 37 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 38 H 0.07 0.07 8.10 -51.93 -0.42 -0.35 16 39 H 0.08 -0.20 8.14 -51.93 -0.42 -0.63 16 40 H 0.06 -0.14 7.46 -51.93 -0.39 -0.53 16 41 H 0.07 -0.08 8.06 -51.93 -0.42 -0.50 16 42 H 0.08 -0.17 8.04 -51.93 -0.42 -0.59 16 43 H 0.08 -0.15 8.04 -51.93 -0.42 -0.57 16 44 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 46 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 47 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 48 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 49 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 50 H 0.08 -0.16 8.03 -51.93 -0.42 -0.58 16 51 H 0.08 -0.19 8.06 -51.93 -0.42 -0.61 16 LS Contribution 401.67 15.07 6.05 6.05 Total: 0.00 -8.48 401.67 -10.78 -19.26 By element: Atomic # 1 Polarization: -4.53 SS G_CDS: -7.25 Total: -11.77 kcal Atomic # 6 Polarization: 5.49 SS G_CDS: -2.02 Total: 3.47 kcal Atomic # 7 Polarization: -1.40 SS G_CDS: -0.52 Total: -1.93 kcal Atomic # 8 Polarization: -3.22 SS G_CDS: -0.34 Total: -3.56 kcal Atomic # 14 Polarization: -4.82 SS G_CDS: -6.71 Total: -11.52 kcal Total LS contribution 6.05 Total: 6.05 kcal Total: -8.48 -10.78 -19.26 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.364 kcal (2) G-P(sol) polarization free energy of solvation -8.479 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -38.844 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.784 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.263 kcal (6) G-S(sol) free energy of system = (1) + (5) -49.627 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds