Wall clock time and date at job start Sun Mar 7 2021 10:05:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50700 * 1 3 3 C 1.36418 * 125.79838 * 2 1 4 4 C 1.47376 * 127.19685 * 0.02562 * 3 2 1 5 5 O 1.21616 * 119.99410 * 359.70474 * 4 3 2 6 6 N 1.34772 * 120.00598 * 179.70789 * 4 3 2 7 7 C 1.46499 * 120.00390 * 180.02562 * 6 4 3 8 8 C 1.52995 * 109.47347 * 179.97438 * 7 6 4 9 9 C 1.53579 * 109.47126 * 64.95551 * 8 7 6 10 10 C 1.55142 * 111.29168 * 169.06332 * 9 8 7 11 11 Si 1.89522 * 101.35640 * 331.41615 * 10 9 8 12 12 C 1.86302 * 111.50035 * 245.87503 * 11 10 9 13 13 C 1.86296 * 111.47438 * 120.81979 * 11 10 9 14 14 C 1.55915 * 109.47284 * 184.99629 * 8 7 6 15 15 C 1.47030 * 105.61523 * 179.75330 * 3 2 1 16 16 C 1.34173 * 105.95008 * 0.22853 * 15 3 2 17 17 C 1.50703 * 125.43518 * 179.97438 * 16 15 3 18 18 O 1.42892 * 109.47320 * 299.99844 * 17 16 15 19 19 Si 1.86298 * 109.47329 * 179.97438 * 17 16 15 20 20 H 1.48501 * 109.47054 * 59.99895 * 19 17 16 21 21 H 1.48498 * 109.47736 * 179.97438 * 19 17 16 22 22 H 1.48500 * 109.47204 * 300.00374 * 19 17 16 23 23 O 1.33652 * 125.80568 * 180.14209 * 2 1 3 24 24 H 1.08992 * 109.47094 * 90.00031 * 1 2 3 25 25 H 1.09002 * 109.46530 * 209.99940 * 1 2 3 26 26 H 1.09000 * 109.47228 * 329.99512 * 1 2 3 27 27 H 0.96999 * 119.99906 * 359.97438 * 6 4 3 28 28 H 1.09005 * 109.47153 * 59.99538 * 7 6 4 29 29 H 1.08998 * 109.46626 * 299.99977 * 7 6 4 30 30 H 1.08998 * 109.43266 * 304.97950 * 8 7 6 31 31 H 1.09003 * 109.12131 * 289.54515 * 9 8 7 32 32 H 1.09003 * 109.12469 * 48.57380 * 9 8 7 33 33 H 1.08998 * 111.05389 * 89.42432 * 10 9 8 34 34 H 1.09008 * 111.04817 * 213.35695 * 10 9 8 35 35 H 1.08996 * 109.47140 * 169.74269 * 12 11 10 36 36 H 1.09003 * 109.46829 * 289.73891 * 12 11 10 37 37 H 1.08996 * 109.47108 * 49.73930 * 12 11 10 38 38 H 1.08994 * 109.47400 * 310.27678 * 13 11 10 39 39 H 1.09005 * 109.47314 * 70.27845 * 13 11 10 40 40 H 1.09006 * 109.47297 * 190.27473 * 13 11 10 41 41 H 1.09002 * 111.42836 * 316.88879 * 14 8 7 42 42 H 1.09001 * 111.42626 * 81.77797 * 14 8 7 43 43 H 1.07999 * 127.02349 * 180.20611 * 15 3 2 44 44 H 1.09004 * 109.47132 * 60.00088 * 17 16 15 45 45 H 0.96697 * 114.00293 * 299.99876 * 18 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3050 1.1065 0.0000 4 6 1.8740 2.5158 0.0005 5 8 0.6889 2.7891 -0.0044 6 7 2.7929 3.5016 0.0064 7 6 2.3644 4.9025 0.0075 8 6 3.5946 5.8122 0.0152 9 6 4.3767 5.6265 -1.2935 10 6 5.4712 6.7141 -1.4547 11 14 4.7094 8.1563 -0.4894 12 6 4.2982 9.5865 -1.6101 13 6 5.8084 8.6923 0.9160 14 6 3.1412 7.2983 0.1443 15 6 3.6850 0.5992 0.0061 16 6 3.5859 -0.7389 0.0040 17 6 4.7460 -1.7009 0.0079 18 8 5.5478 -1.4850 -1.1550 19 14 4.1029 -3.4493 0.0036 20 1 3.2800 -3.6711 -1.2125 21 1 5.2459 -4.3973 0.0069 22 1 3.2699 -3.6733 1.2124 23 8 2.2889 -1.0839 -0.0027 24 1 -0.3633 0.0000 -1.0276 25 1 -0.3632 -0.8900 0.5139 26 1 -0.3634 0.8899 0.5139 27 1 3.7381 3.2836 0.0107 28 1 1.7630 5.0979 0.8954 29 1 1.7705 5.1014 -0.8846 30 1 4.2326 5.5521 0.8597 31 1 4.8476 4.6435 -1.2916 32 1 3.6856 5.6878 -2.1343 33 1 6.4105 6.3943 -1.0037 34 1 5.6120 6.9754 -2.5036 35 1 3.7021 10.3170 -1.0632 36 1 5.2202 10.0548 -1.9547 37 1 3.7318 9.2246 -2.4682 38 1 6.1038 7.8203 1.4994 39 1 6.6975 9.1802 0.5164 40 1 5.2671 9.3904 1.5548 41 1 2.2849 7.5105 -0.4958 42 1 2.9342 7.5628 1.1813 43 1 4.5928 1.1841 0.0109 44 1 5.3497 -1.5384 0.9008 45 1 5.0743 -1.6125 -1.9884 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_13308374.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:05:18 Heat of formation + Delta-G solvation = -113.405310 kcal Electronic energy + Delta-G solvation = -23705.715423 eV Core-core repulsion = 20233.480215 eV Total energy + Delta-G solvation = -3472.235208 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 311.151 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.71743 -40.42162 -38.12341 -37.83097 -34.69650 -33.96599 -33.05872 -30.61679 -29.43728 -29.26115 -28.55114 -27.26478 -25.57038 -24.29566 -23.70915 -21.97685 -21.14782 -20.34999 -18.93061 -17.97428 -17.68491 -17.05382 -16.70986 -16.41648 -15.98193 -15.89292 -15.59664 -15.10373 -14.80006 -14.60520 -14.33935 -14.19473 -14.01293 -13.97546 -13.92275 -13.85441 -13.70453 -13.55982 -13.38390 -13.23303 -12.92952 -12.81947 -12.66122 -12.30102 -12.23347 -12.09071 -11.95227 -11.51120 -11.01061 -10.93253 -10.85322 -10.65220 -10.50552 -10.42393 -9.99376 -9.51791 0.33975 0.85010 1.00226 1.34678 1.42013 1.54245 1.70727 1.81032 1.83964 1.87121 2.28992 2.43398 2.49922 3.14813 3.39518 3.70290 3.80353 3.83217 3.95716 4.03250 4.16006 4.28851 4.44000 4.45479 4.47758 4.54432 4.56644 4.64706 4.66638 4.67404 4.68825 4.69350 4.75238 4.81688 4.92920 5.02136 5.08979 5.13561 5.21244 5.24539 5.35226 5.38595 5.44018 5.47539 5.53829 5.93413 6.30892 6.57427 7.31350 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 C 0.093 3.907 3 C -0.252 4.252 4 C 0.591 3.409 5 O -0.541 6.541 6 N -0.724 5.724 7 C 0.128 3.872 8 C -0.098 4.098 9 C -0.112 4.112 10 C -0.398 4.398 11 Si 0.966 3.034 12 C -0.443 4.443 13 C -0.442 4.442 14 C -0.390 4.390 15 C -0.146 4.146 16 C -0.059 4.059 17 C -0.040 4.040 18 O -0.529 6.529 19 Si 0.956 3.044 20 H -0.249 1.249 21 H -0.245 1.245 22 H -0.246 1.246 23 O -0.173 6.173 24 H 0.092 0.908 25 H 0.081 0.919 26 H 0.111 0.889 27 H 0.400 0.600 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.079 0.921 31 H 0.060 0.940 32 H 0.065 0.935 33 H 0.075 0.925 34 H 0.078 0.922 35 H 0.070 0.930 36 H 0.069 0.931 37 H 0.070 0.930 38 H 0.070 0.930 39 H 0.069 0.931 40 H 0.070 0.930 41 H 0.083 0.917 42 H 0.081 0.919 43 H 0.159 0.841 44 H 0.137 0.863 45 H 0.381 0.619 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.595 0.559 -0.043 2.655 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.142 4.142 2 C 0.040 3.960 3 C -0.256 4.256 4 C 0.379 3.621 5 O -0.420 6.420 6 N -0.376 5.376 7 C 0.005 3.995 8 C -0.116 4.116 9 C -0.149 4.149 10 C -0.484 4.484 11 Si 1.164 2.836 12 C -0.551 4.551 13 C -0.551 4.551 14 C -0.477 4.477 15 C -0.165 4.165 16 C -0.107 4.107 17 C -0.150 4.150 18 O -0.334 6.334 19 Si 0.776 3.224 20 H -0.172 1.172 21 H -0.168 1.168 22 H -0.170 1.170 23 O -0.071 6.071 24 H 0.110 0.890 25 H 0.099 0.901 26 H 0.130 0.870 27 H 0.235 0.765 28 H 0.088 0.912 29 H 0.088 0.912 30 H 0.097 0.903 31 H 0.079 0.921 32 H 0.084 0.916 33 H 0.094 0.906 34 H 0.097 0.903 35 H 0.089 0.911 36 H 0.088 0.912 37 H 0.090 0.910 38 H 0.089 0.911 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.102 0.898 42 H 0.099 0.901 43 H 0.177 0.823 44 H 0.154 0.846 45 H 0.229 0.771 Dipole moment (debyes) X Y Z Total from point charges 1.821 -0.211 0.400 1.876 hybrid contribution 0.347 0.381 -0.383 0.642 sum 2.168 0.170 0.017 2.175 Atomic orbital electron populations 1.20698 0.83370 1.05419 1.04753 1.22904 0.94057 0.82829 0.96193 1.21159 0.93238 0.93882 1.17367 1.17163 0.85437 0.83703 0.75817 1.90777 1.16552 1.84067 1.50606 1.45859 1.09749 1.06267 1.75692 1.21493 0.96616 0.78704 1.02653 1.21878 0.95918 0.95126 0.98726 1.21770 0.96980 0.99205 0.96962 1.26515 1.02056 1.11680 1.08163 0.80545 0.67831 0.67600 0.67629 1.26017 1.05252 1.13671 1.10164 1.26022 1.09882 1.05826 1.13325 1.26755 1.13793 1.00781 1.06325 1.22570 0.96450 0.93422 1.04085 1.22654 0.82843 0.95808 1.09416 1.24361 0.90368 1.07448 0.92840 1.86565 1.38175 1.93335 1.15368 0.85524 0.80073 0.73977 0.82791 1.17168 1.16818 1.16962 1.83670 1.16509 1.35261 1.71617 0.88972 0.90065 0.87041 0.76487 0.91196 0.91192 0.90289 0.92092 0.91648 0.90567 0.90348 0.91107 0.91207 0.91039 0.91105 0.91135 0.91128 0.89839 0.90058 0.82330 0.84594 0.77059 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 -0.05 9.89 36.01 0.36 0.31 16 2 C 0.09 0.21 7.37 -34.96 -0.26 -0.04 16 3 C -0.25 -0.62 6.31 -103.27 -0.65 -1.27 16 4 C 0.59 2.03 7.81 -12.54 -0.10 1.93 16 5 O -0.54 -3.40 14.85 5.26 0.08 -3.32 16 6 N -0.72 -0.53 5.35 -61.40 -0.33 -0.86 16 7 C 0.13 0.05 5.06 -4.04 -0.02 0.03 16 8 C -0.10 0.16 2.21 -88.76 -0.20 -0.04 16 9 C -0.11 0.18 5.14 -25.30 -0.13 0.05 16 10 C -0.40 0.83 5.85 38.29 0.22 1.05 16 11 Si 0.97 -3.07 13.37 -169.99 -2.27 -5.34 16 12 C -0.44 0.82 8.65 101.05 0.87 1.69 16 13 C -0.44 0.91 8.65 101.05 0.87 1.79 16 14 C -0.39 0.82 5.28 38.71 0.20 1.03 16 15 C -0.15 -0.10 10.46 -37.45 -0.39 -0.49 16 16 C -0.06 -0.04 6.20 -35.74 -0.22 -0.26 16 17 C -0.04 0.05 2.97 36.01 0.11 0.16 16 18 O -0.53 0.53 12.86 -35.23 -0.45 0.08 16 19 Si 0.96 -0.80 27.37 -169.99 -4.65 -5.46 16 20 H -0.25 -0.03 7.11 56.52 0.40 0.37 16 21 H -0.25 0.03 7.11 56.52 0.40 0.43 16 22 H -0.25 -0.10 7.11 56.52 0.40 0.30 16 23 O -0.17 -0.34 8.89 7.65 0.07 -0.27 16 24 H 0.09 -0.03 8.14 -51.93 -0.42 -0.45 16 25 H 0.08 -0.09 8.14 -51.93 -0.42 -0.51 16 26 H 0.11 0.19 6.49 -51.93 -0.34 -0.14 16 27 H 0.40 -0.55 6.91 -40.82 -0.28 -0.84 16 28 H 0.07 0.10 8.14 -51.93 -0.42 -0.33 16 29 H 0.07 0.09 8.10 -51.93 -0.42 -0.33 16 30 H 0.08 -0.17 8.14 -51.93 -0.42 -0.60 16 31 H 0.06 -0.10 7.46 -51.93 -0.39 -0.49 16 32 H 0.06 -0.06 8.06 -51.93 -0.42 -0.48 16 33 H 0.08 -0.16 8.04 -51.93 -0.42 -0.58 16 34 H 0.08 -0.14 8.05 -51.92 -0.42 -0.56 16 35 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 36 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 37 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 38 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 39 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 40 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 41 H 0.08 -0.15 8.03 -51.93 -0.42 -0.57 16 42 H 0.08 -0.18 8.06 -51.93 -0.42 -0.60 16 43 H 0.16 -0.23 7.74 -52.49 -0.41 -0.64 16 44 H 0.14 -0.38 7.96 -51.93 -0.41 -0.80 16 45 H 0.38 -1.50 8.70 45.56 0.40 -1.10 16 LS Contribution 369.81 15.07 5.57 5.57 Total: 0.00 -6.58 369.81 -8.22 -14.80 By element: Atomic # 1 Polarization: -4.25 SS G_CDS: -6.91 Total: -11.15 kcal Atomic # 6 Polarization: 5.27 SS G_CDS: 0.67 Total: 5.94 kcal Atomic # 7 Polarization: -0.53 SS G_CDS: -0.33 Total: -0.86 kcal Atomic # 8 Polarization: -3.20 SS G_CDS: -0.31 Total: -3.51 kcal Atomic # 14 Polarization: -3.87 SS G_CDS: -6.93 Total: -10.80 kcal Total LS contribution 5.57 Total: 5.57 kcal Total: -6.58 -8.22 -14.80 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_13308374.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.603 kcal (2) G-P(sol) polarization free energy of solvation -6.580 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.183 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.223 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -14.802 kcal (6) G-S(sol) free energy of system = (1) + (5) -113.405 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds