Wall clock time and date at job start Sun Mar 7 2021 10:10:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86292 * 1 3 3 C 1.86298 * 111.24319 * 2 1 4 4 C 1.89333 * 111.46296 * 125.06747 * 2 1 3 5 5 C 1.55152 * 101.34862 * 120.85216 * 4 2 1 6 6 C 1.53568 * 111.28923 * 331.41597 * 5 4 2 7 7 C 1.52997 * 109.47109 * 169.06220 * 6 5 4 8 8 N 1.46505 * 109.47419 * 66.45583 * 7 6 5 9 9 C 1.34769 * 119.99920 * 180.02562 * 8 7 6 10 10 O 1.21280 * 120.00761 * 359.97438 * 9 8 7 11 11 C 1.50706 * 119.99849 * 179.97438 * 9 8 7 12 12 C 1.50698 * 109.47178 * 179.97438 * 11 9 8 13 13 C 1.34845 * 125.88977 * 275.02367 * 12 11 9 14 14 C 1.40899 * 107.41955 * 179.97438 * 13 12 11 15 15 C 1.34849 * 107.40982 * 359.73389 * 14 13 12 16 16 C 1.50708 * 125.88737 * 180.25597 * 15 14 13 17 17 O 1.42902 * 109.47043 * 120.20092 * 16 15 14 18 18 Si 1.86292 * 109.47087 * 0.20007 * 16 15 14 19 19 H 1.48502 * 109.47246 * 59.99990 * 18 16 15 20 20 H 1.48503 * 109.47216 * 179.97438 * 18 16 15 21 21 H 1.48495 * 109.47267 * 299.99973 * 18 16 15 22 22 N 1.36341 * 108.22519 * 0.42861 * 15 14 13 23 23 C 1.55915 * 109.50843 * 49.03866 * 6 5 4 24 24 H 1.09004 * 109.47240 * 294.93287 * 1 2 3 25 25 H 1.09005 * 109.47452 * 54.93036 * 1 2 3 26 26 H 1.09000 * 109.47321 * 174.93641 * 1 2 3 27 27 H 1.08995 * 109.47721 * 185.06953 * 3 2 1 28 28 H 1.09002 * 109.47605 * 305.07176 * 3 2 1 29 29 H 1.09000 * 109.47295 * 65.06473 * 3 2 1 30 30 H 1.09002 * 111.04278 * 2.83570 * 4 2 1 31 31 H 1.08997 * 111.08597 * 238.88709 * 4 2 1 32 32 H 1.08996 * 109.12433 * 210.93514 * 5 4 2 33 33 H 1.08992 * 109.12258 * 91.89699 * 5 4 2 34 34 H 1.09004 * 109.47579 * 289.05481 * 6 5 4 35 35 H 1.09004 * 109.47173 * 306.45099 * 7 6 5 36 36 H 1.09001 * 109.47327 * 186.45374 * 7 6 5 37 37 H 0.96999 * 119.99772 * 359.97438 * 8 7 6 38 38 H 1.08999 * 109.46816 * 59.99449 * 11 9 8 39 39 H 1.09001 * 109.46873 * 299.99830 * 11 9 8 40 40 H 1.07997 * 126.29434 * 359.97438 * 13 12 11 41 41 H 1.07996 * 126.29224 * 179.97438 * 14 13 12 42 42 H 1.08997 * 109.46831 * 240.19961 * 16 15 14 43 43 H 0.96703 * 114.00238 * 300.00395 * 17 16 15 44 44 H 0.97001 * 125.64231 * 179.83591 * 22 15 14 45 45 H 1.08994 * 111.42755 * 76.90476 * 23 6 5 46 46 H 1.09002 * 111.42505 * 201.84895 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8629 0.0000 0.0000 3 6 2.5379 1.7364 0.0000 4 6 2.5557 -1.0124 1.4422 5 6 3.3934 -2.0805 0.6908 6 6 2.8147 -2.3636 -0.7032 7 6 3.8085 -3.2047 -1.5067 8 7 3.9328 -4.5303 -0.8954 9 6 4.7595 -5.4470 -1.4363 10 8 5.4003 -5.1749 -2.4294 11 6 4.8878 -6.8104 -0.8071 12 6 5.8666 -7.6389 -1.5987 13 6 5.5799 -8.3649 -2.6982 14 6 6.7750 -8.9800 -3.1209 15 6 7.7475 -8.6017 -2.2668 16 6 9.1950 -9.0156 -2.3368 17 8 10.0161 -7.8546 -2.4783 18 14 9.4496 -10.1386 -3.8012 19 1 9.0796 -9.4195 -5.0467 20 1 10.8760 -10.5459 -3.8706 21 1 8.5964 -11.3450 -3.6542 22 7 7.1949 -7.7832 -1.3269 23 6 2.5568 -1.0158 -1.4434 24 1 -0.3634 0.4332 0.9319 25 1 -0.3634 0.5905 -0.8411 26 1 -0.3634 -1.0236 -0.0907 27 1 3.6236 1.7043 -0.0908 28 1 2.1192 2.2891 -0.8411 29 1 2.2658 2.2320 0.9319 30 1 1.7533 -1.4764 2.0157 31 1 3.1882 -0.3989 2.0838 32 1 3.3972 -3.0037 1.2701 33 1 4.4175 -1.7224 0.5863 34 1 1.8757 -2.9080 -0.6032 35 1 4.7815 -2.7132 -1.5097 36 1 3.4512 -3.3092 -2.5312 37 1 3.4207 -4.7479 -0.1009 38 1 3.9150 -7.3021 -0.8041 39 1 5.2450 -6.7056 0.2173 40 1 4.6122 -8.4578 -3.1685 41 1 6.8915 -9.6314 -3.9744 42 1 9.4665 -9.5434 -1.4226 43 1 9.8291 -7.3350 -3.2722 44 1 7.6691 -7.3686 -0.5892 45 1 3.4838 -0.5864 -1.8233 46 1 1.8202 -1.1328 -2.2383 RHF calculation, no. of doubly occupied orbitals= 56 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_14644196.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:10:33 Heat of formation + Delta-G solvation = -84.412049 kcal Electronic energy + Delta-G solvation = -23116.879745 eV Core-core repulsion = 19743.620440 eV Total energy + Delta-G solvation = -3373.259304 eV No. of doubly occupied orbitals = 56 Molecular weight (most abundant/longest-lived isotopes) = 310.163 amu Computer time = 0.51 seconds Orbital eigenvalues (eV) -42.24180 -40.49649 -37.93457 -37.58629 -34.61448 -33.08179 -31.82002 -30.66239 -29.41951 -29.26513 -28.57330 -26.85878 -24.95329 -24.05566 -21.78264 -21.26755 -21.12463 -20.70165 -18.91013 -18.03865 -17.40397 -16.73295 -16.53683 -16.27685 -16.03782 -15.43648 -15.21615 -14.88232 -14.72011 -14.53384 -14.19590 -14.13679 -14.01078 -13.98241 -13.91218 -13.79703 -13.61864 -13.48295 -13.37825 -13.22740 -12.76582 -12.67036 -12.33760 -12.17801 -11.98326 -11.96391 -11.70752 -11.55623 -10.96135 -10.92207 -10.56724 -10.53498 -10.45523 -10.01362 -9.67167 -8.85067 1.11457 1.26811 1.51746 1.57306 1.61505 1.71282 1.78028 1.81085 1.96624 1.99497 2.36575 2.46738 2.56242 3.50675 3.66849 3.71673 3.86459 3.88935 3.97632 4.04777 4.07139 4.38990 4.41495 4.43718 4.50941 4.51650 4.62024 4.62316 4.64507 4.66429 4.67191 4.71720 4.86221 4.89246 4.97495 5.05089 5.16787 5.31159 5.35090 5.35692 5.38693 5.40374 5.45184 5.49314 6.09274 6.23887 6.49372 6.55705 6.71887 7.28925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.443 4.443 2 Si 0.968 3.032 3 C -0.443 4.443 4 C -0.399 4.399 5 C -0.111 4.111 6 C -0.097 4.097 7 C 0.128 3.872 8 N -0.734 5.734 9 C 0.509 3.491 10 O -0.524 6.524 11 C -0.072 4.072 12 C 0.037 3.963 13 C -0.173 4.173 14 C -0.195 4.195 15 C -0.010 4.010 16 C -0.062 4.062 17 O -0.545 6.545 18 Si 0.978 3.022 19 H -0.250 1.250 20 H -0.256 1.256 21 H -0.249 1.249 22 N -0.533 5.533 23 C -0.391 4.391 24 H 0.070 0.930 25 H 0.069 0.931 26 H 0.070 0.930 27 H 0.070 0.930 28 H 0.069 0.931 29 H 0.069 0.931 30 H 0.076 0.924 31 H 0.078 0.922 32 H 0.060 0.940 33 H 0.064 0.936 34 H 0.079 0.921 35 H 0.067 0.933 36 H 0.069 0.931 37 H 0.400 0.600 38 H 0.116 0.884 39 H 0.099 0.901 40 H 0.136 0.864 41 H 0.136 0.864 42 H 0.114 0.886 43 H 0.380 0.620 44 H 0.413 0.587 45 H 0.082 0.918 46 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.500 1.020 3.695 5.191 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.166 2.834 3 C -0.552 4.552 4 C -0.485 4.485 5 C -0.149 4.149 6 C -0.116 4.116 7 C 0.004 3.996 8 N -0.387 5.387 9 C 0.294 3.706 10 O -0.399 6.399 11 C -0.113 4.113 12 C -0.077 4.077 13 C -0.197 4.197 14 C -0.220 4.220 15 C -0.124 4.124 16 C -0.172 4.172 17 O -0.351 6.351 18 Si 0.799 3.201 19 H -0.173 1.173 20 H -0.180 1.180 21 H -0.172 1.172 22 N -0.128 5.128 23 C -0.477 4.477 24 H 0.089 0.911 25 H 0.089 0.911 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.088 0.912 30 H 0.095 0.905 31 H 0.096 0.904 32 H 0.079 0.921 33 H 0.083 0.917 34 H 0.097 0.903 35 H 0.085 0.915 36 H 0.087 0.913 37 H 0.234 0.766 38 H 0.134 0.866 39 H 0.117 0.883 40 H 0.154 0.846 41 H 0.154 0.846 42 H 0.132 0.868 43 H 0.228 0.772 44 H 0.250 0.750 45 H 0.101 0.899 46 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -2.591 0.559 2.927 3.949 hybrid contribution -0.439 0.543 0.716 1.000 sum -3.030 1.102 3.643 4.865 Atomic orbital electron populations 1.26025 1.19968 1.04550 1.04538 0.80505 0.67525 0.67463 0.67944 1.26027 1.06648 1.18005 1.04485 1.26502 1.05166 1.06686 1.10185 1.21765 0.99794 0.99136 0.94162 1.21876 0.98622 0.96495 0.94621 1.21469 0.99558 0.81594 0.96939 1.46094 1.46191 1.14307 1.32099 1.20590 0.79354 0.86115 0.84523 1.90767 1.44379 1.79756 1.24997 1.20139 0.99947 0.92089 0.99132 1.19474 0.83941 1.03977 1.00309 1.20565 0.98960 1.02601 0.97597 1.20654 0.92983 1.06411 1.01917 1.20791 0.95669 1.01480 0.94456 1.24757 0.85232 0.94799 1.12391 1.86472 1.60005 1.39274 1.49317 0.85275 0.80542 0.78306 0.76025 1.17276 1.17959 1.17244 1.41760 1.07639 1.38881 1.24525 1.26762 1.06774 1.03914 1.10286 0.91115 0.91135 0.91107 0.91052 0.91133 0.91180 0.90548 0.90353 0.92094 0.91731 0.90258 0.91452 0.91307 0.76582 0.86552 0.88272 0.84644 0.84619 0.86799 0.77197 0.75011 0.89892 0.90040 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 1.05 8.65 101.05 0.87 1.93 16 2 Si 0.97 -3.39 13.36 -169.99 -2.27 -5.67 16 3 C -0.44 0.91 8.65 101.05 0.87 1.78 16 4 C -0.40 1.04 5.85 38.30 0.22 1.27 16 5 C -0.11 0.26 5.17 -25.30 -0.13 0.13 16 6 C -0.10 0.22 2.19 -88.77 -0.19 0.03 16 7 C 0.13 -0.03 5.05 -4.04 -0.02 -0.05 16 8 N -0.73 0.79 5.37 -60.29 -0.32 0.46 16 9 C 0.51 0.76 7.82 -10.99 -0.09 0.67 16 10 O -0.52 -3.33 16.03 5.56 0.09 -3.24 16 11 C -0.07 0.08 6.24 -29.03 -0.18 -0.10 16 12 C 0.04 0.07 5.66 -81.79 -0.46 -0.39 16 13 C -0.17 -0.54 10.76 -39.78 -0.43 -0.96 16 14 C -0.19 -0.58 9.37 -39.78 -0.37 -0.95 16 15 C -0.01 -0.02 6.50 -81.79 -0.53 -0.55 16 16 C -0.06 -0.04 3.08 36.01 0.11 0.08 16 17 O -0.55 -0.77 12.88 -35.23 -0.45 -1.23 16 18 Si 0.98 0.21 25.87 -169.99 -4.40 -4.19 16 19 H -0.25 -0.24 7.11 56.52 0.40 0.16 16 20 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 21 H -0.25 -0.18 7.11 56.52 0.40 0.22 16 22 N -0.53 -0.88 6.08 -5.44 -0.03 -0.91 16 23 C -0.39 0.94 5.29 38.71 0.20 1.14 16 24 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 25 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 26 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 27 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 28 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 29 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 30 H 0.08 -0.20 8.04 -51.93 -0.42 -0.62 16 31 H 0.08 -0.18 8.04 -51.93 -0.42 -0.60 16 32 H 0.06 -0.17 7.55 -51.93 -0.39 -0.56 16 33 H 0.06 -0.10 8.04 -51.93 -0.42 -0.52 16 34 H 0.08 -0.24 8.14 -51.93 -0.42 -0.66 16 35 H 0.07 0.07 8.07 -51.93 -0.42 -0.35 16 36 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 37 H 0.40 -1.55 7.84 -40.82 -0.32 -1.87 16 38 H 0.12 -0.39 8.14 -51.93 -0.42 -0.81 16 39 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 40 H 0.14 0.26 8.06 -52.49 -0.42 -0.16 16 41 H 0.14 0.23 6.22 -52.49 -0.33 -0.10 16 42 H 0.11 -0.07 7.96 -51.93 -0.41 -0.48 16 43 H 0.38 -0.36 8.70 45.56 0.40 0.04 16 44 H 0.41 -0.07 8.96 -40.82 -0.37 -0.43 16 45 H 0.08 -0.16 8.03 -51.93 -0.42 -0.58 16 46 H 0.08 -0.20 8.06 -51.93 -0.42 -0.61 16 LS Contribution 375.09 15.07 5.65 5.65 Total: 0.00 -8.25 375.09 -9.18 -17.42 By element: Atomic # 1 Polarization: -5.00 SS G_CDS: -7.32 Total: -12.32 kcal Atomic # 6 Polarization: 4.13 SS G_CDS: -0.12 Total: 4.01 kcal Atomic # 7 Polarization: -0.09 SS G_CDS: -0.36 Total: -0.45 kcal Atomic # 8 Polarization: -4.10 SS G_CDS: -0.36 Total: -4.47 kcal Atomic # 14 Polarization: -3.18 SS G_CDS: -6.67 Total: -9.85 kcal Total LS contribution 5.65 Total: 5.65 kcal Total: -8.25 -9.18 -17.42 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_14644196.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.990 kcal (2) G-P(sol) polarization free energy of solvation -8.247 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -75.237 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.175 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.422 kcal (6) G-S(sol) free energy of system = (1) + (5) -84.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.51 seconds