Wall clock time and date at job start Sun Mar 7 2021 10:19:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35997 * 116.99812 * 2 1 4 4 C 1.38530 * 120.07284 * 0.02562 * 3 2 1 5 5 C 1.38283 * 119.99775 * 179.97438 * 4 3 2 6 6 C 1.50699 * 119.92553 * 179.97438 * 5 4 3 7 7 O 1.42896 * 109.47508 * 300.00323 * 6 5 4 8 8 Si 1.86297 * 109.46985 * 180.02562 * 6 5 4 9 9 H 1.48510 * 109.47173 * 60.00718 * 8 6 5 10 10 H 1.48505 * 109.47322 * 180.02562 * 8 6 5 11 11 H 1.48498 * 109.47649 * 300.00352 * 8 6 5 12 12 C 1.38216 * 120.14782 * 359.97438 * 5 4 3 13 13 C 1.38286 * 120.14398 * 359.76803 * 12 5 4 14 14 C 1.38521 * 119.99986 * 0.50229 * 13 12 5 15 15 O 1.35998 * 120.07534 * 179.74461 * 14 13 12 16 16 C 1.42898 * 116.99463 * 359.73159 * 15 14 13 17 17 C 1.50706 * 109.47060 * 179.97438 * 16 15 14 18 18 O 1.21281 * 119.99699 * 359.97438 * 17 16 15 19 19 N 1.34773 * 120.00080 * 180.02562 * 17 16 15 20 20 C 1.46506 * 119.99969 * 180.02562 * 19 17 16 21 21 C 1.52998 * 109.47237 * 179.72043 * 20 19 17 22 22 C 1.53573 * 109.47298 * 66.45247 * 21 20 19 23 23 C 1.55142 * 111.29462 * 169.06014 * 22 21 20 24 24 Si 1.89338 * 101.34667 * 331.41516 * 23 22 21 25 25 C 1.86298 * 111.45914 * 120.85141 * 24 23 22 26 26 C 1.86298 * 111.45758 * 245.79617 * 24 23 22 27 27 C 1.55911 * 109.47189 * 186.49640 * 21 20 19 28 28 H 1.08995 * 109.47240 * 300.00029 * 1 2 3 29 29 H 1.09001 * 109.46950 * 60.00103 * 1 2 3 30 30 H 1.09001 * 109.46831 * 180.02562 * 1 2 3 31 31 H 1.07993 * 120.00095 * 359.95867 * 4 3 2 32 32 H 1.08999 * 109.46865 * 60.00920 * 6 5 4 33 33 H 0.96692 * 114.00214 * 300.00462 * 7 6 5 34 34 H 1.07996 * 119.92306 * 180.02562 * 12 5 4 35 35 H 1.07997 * 119.99786 * 180.25521 * 13 12 5 36 36 H 1.09004 * 109.47454 * 60.00063 * 16 15 14 37 37 H 1.08998 * 109.47671 * 299.99844 * 16 15 14 38 38 H 0.97005 * 120.00161 * 359.72088 * 19 17 16 39 39 H 1.09001 * 109.46512 * 299.72412 * 20 19 17 40 40 H 1.08998 * 109.47174 * 59.71534 * 20 19 17 41 41 H 1.08996 * 109.46978 * 306.45199 * 21 20 19 42 42 H 1.09007 * 109.12789 * 289.54725 * 22 21 20 43 43 H 1.09005 * 109.12280 * 48.57219 * 22 21 20 44 44 H 1.08998 * 111.04876 * 89.42814 * 23 22 21 45 45 H 1.08998 * 111.05252 * 213.35911 * 23 22 21 46 46 H 1.09004 * 109.46992 * 60.00035 * 25 24 23 47 47 H 1.09002 * 109.46729 * 180.02562 * 25 24 23 48 48 H 1.08994 * 109.47456 * 299.99907 * 25 24 23 49 49 H 1.09005 * 109.47313 * 59.99743 * 26 24 23 50 50 H 1.09001 * 109.47335 * 179.97438 * 26 24 23 51 51 H 1.08997 * 109.47335 * 299.99813 * 26 24 23 52 52 H 1.08999 * 111.42569 * 316.88203 * 27 21 20 53 53 H 1.08993 * 111.42505 * 81.82823 * 27 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2118 0.0000 4 6 1.2934 2.3745 0.0005 5 6 1.9227 3.6058 0.0011 6 6 1.1019 4.8697 0.0011 7 8 0.2779 4.9026 -1.1659 8 14 2.2368 6.3471 0.0011 9 1 3.0934 6.3133 -1.2116 10 1 1.4280 7.5926 0.0017 11 1 3.0936 6.3133 1.2135 12 6 3.3029 3.6799 0.0016 13 6 4.0605 2.5231 0.0065 14 6 3.4363 1.2864 0.0003 15 8 4.1799 0.1477 -0.0002 16 6 5.6007 0.3008 -0.0001 17 6 6.2523 -1.0581 -0.0001 18 8 5.5675 -2.0590 0.0003 19 7 7.5961 -1.1610 0.0005 20 6 8.2296 -2.4820 0.0000 21 6 9.7508 -2.3182 -0.0062 22 6 10.2030 -1.6863 1.3185 23 6 11.7452 -1.7496 1.4754 24 14 12.1586 -3.2996 0.4696 25 6 13.3286 -2.9133 -0.9277 26 6 12.8284 -4.6577 1.5549 27 6 10.4233 -3.7149 -0.1730 28 1 -0.3633 0.5138 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 0.2148 2.3193 0.0003 32 1 0.4729 4.8943 0.8909 33 1 0.7719 4.8832 -1.9969 34 1 3.7906 4.6435 0.0024 35 1 5.1387 2.5838 0.0110 36 1 5.9069 0.8502 0.8901 37 1 5.9070 0.8510 -0.8898 38 1 8.1439 -0.3604 -0.0031 39 1 7.9267 -3.0304 0.8920 40 1 7.9199 -3.0331 -0.8879 41 1 10.0434 -1.6734 -0.8348 42 1 9.8839 -0.6443 1.3445 43 1 9.7375 -2.2210 2.1465 44 1 12.2189 -0.8667 1.0464 45 1 12.0276 -1.8738 2.5208 46 1 14.2556 -2.5065 -0.5236 47 1 13.5438 -3.8256 -1.4841 48 1 12.8706 -2.1818 -1.5934 49 1 12.0848 -4.9221 2.3068 50 1 13.0545 -5.5322 0.9448 51 1 13.7374 -4.3136 2.0482 52 1 9.9380 -4.4673 0.4486 53 1 10.4488 -4.0221 -1.2185 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_60476.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:19:19 Heat of formation + Delta-G solvation = -161.202382 kcal Electronic energy + Delta-G solvation = -30459.010664 eV Core-core repulsion = 26226.719248 eV Total energy + Delta-G solvation = -4232.291415 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.75693 -40.75961 -39.29064 -38.86662 -37.83573 -36.90737 -34.70185 -32.07119 -31.46878 -30.85052 -29.57958 -29.27584 -28.57385 -28.42333 -26.70876 -26.05014 -24.16706 -23.47148 -22.51292 -21.57224 -20.88134 -19.75390 -18.59776 -18.31274 -17.98268 -17.52429 -17.09467 -16.95659 -16.63592 -16.27469 -16.12267 -15.94878 -15.84774 -15.47939 -15.41842 -15.04989 -14.76150 -14.60628 -14.37120 -14.03904 -13.99623 -13.85843 -13.70806 -13.64287 -13.59814 -13.50048 -13.37764 -13.22234 -12.71182 -12.63302 -12.53595 -12.35682 -12.24220 -12.16030 -12.06973 -12.00299 -11.97377 -11.60992 -11.56724 -10.96228 -10.92278 -10.54295 -10.47578 -10.46024 -10.09804 -9.75901 -8.83059 0.19423 0.30858 1.11722 1.40100 1.44805 1.47679 1.57725 1.58384 1.77722 1.80998 1.87662 2.34181 2.45134 2.59020 2.61266 3.40971 3.49643 3.64408 3.70173 3.78820 3.81368 3.90076 3.93060 3.94617 3.97642 4.14640 4.27142 4.31964 4.36834 4.39844 4.42435 4.49224 4.54738 4.59222 4.62216 4.64057 4.66391 4.67414 4.67881 4.70188 4.86320 4.95783 5.01213 5.04351 5.11143 5.16250 5.27316 5.34211 5.37534 5.37850 5.44177 5.45430 5.57389 5.99322 6.38540 6.51379 6.57568 7.17431 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.302 6.302 3 C 0.107 3.893 4 C -0.144 4.144 5 C -0.116 4.116 6 C -0.078 4.078 7 O -0.539 6.539 8 Si 0.952 3.048 9 H -0.251 1.251 10 H -0.254 1.254 11 H -0.250 1.250 12 C -0.122 4.122 13 C -0.169 4.169 14 C 0.104 3.896 15 O -0.276 6.276 16 C 0.038 3.962 17 C 0.514 3.486 18 O -0.510 6.510 19 N -0.729 5.729 20 C 0.129 3.871 21 C -0.097 4.097 22 C -0.112 4.112 23 C -0.399 4.399 24 Si 0.969 3.031 25 C -0.443 4.443 26 C -0.443 4.443 27 C -0.391 4.391 28 H 0.056 0.944 29 H 0.057 0.943 30 H 0.103 0.897 31 H 0.143 0.857 32 H 0.118 0.882 33 H 0.377 0.623 34 H 0.126 0.874 35 H 0.138 0.862 36 H 0.094 0.906 37 H 0.093 0.907 38 H 0.401 0.599 39 H 0.071 0.929 40 H 0.071 0.929 41 H 0.080 0.920 42 H 0.061 0.939 43 H 0.065 0.935 44 H 0.076 0.924 45 H 0.078 0.922 46 H 0.070 0.930 47 H 0.069 0.931 48 H 0.070 0.930 49 H 0.071 0.929 50 H 0.069 0.931 51 H 0.069 0.931 52 H 0.083 0.917 53 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.805 3.171 -0.114 5.758 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.215 6.215 3 C 0.061 3.939 4 C -0.163 4.163 5 C -0.117 4.117 6 C -0.189 4.189 7 O -0.344 6.344 8 Si 0.775 3.225 9 H -0.175 1.175 10 H -0.178 1.178 11 H -0.174 1.174 12 C -0.140 4.140 13 C -0.188 4.188 14 C 0.058 3.942 15 O -0.189 6.189 16 C -0.041 4.041 17 C 0.298 3.702 18 O -0.384 6.384 19 N -0.384 5.384 20 C 0.006 3.994 21 C -0.116 4.116 22 C -0.150 4.150 23 C -0.485 4.485 24 Si 1.167 2.833 25 C -0.551 4.551 26 C -0.552 4.552 27 C -0.478 4.478 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.121 0.879 31 H 0.160 0.840 32 H 0.136 0.864 33 H 0.224 0.776 34 H 0.143 0.857 35 H 0.156 0.844 36 H 0.111 0.889 37 H 0.111 0.889 38 H 0.235 0.765 39 H 0.089 0.911 40 H 0.089 0.911 41 H 0.098 0.902 42 H 0.079 0.921 43 H 0.084 0.916 44 H 0.094 0.906 45 H 0.097 0.903 46 H 0.089 0.911 47 H 0.089 0.911 48 H 0.089 0.911 49 H 0.090 0.910 50 H 0.089 0.911 51 H 0.088 0.912 52 H 0.102 0.898 53 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 4.406 2.731 0.335 5.194 hybrid contribution 0.307 0.363 -0.339 0.584 sum 4.713 3.094 -0.004 5.638 Atomic orbital electron populations 1.23136 0.78097 1.04404 1.01405 1.86254 1.21356 1.25319 1.88535 1.18287 0.88983 0.85603 1.00988 1.20928 1.00468 0.90267 1.04620 1.20010 0.93536 0.95362 1.02753 1.24957 1.00439 1.01530 0.91953 1.86506 1.35638 1.96913 1.15344 0.85656 0.77948 0.77189 0.81744 1.17461 1.17819 1.17417 1.20711 0.93063 0.98044 1.02198 1.20965 1.00404 0.90721 1.06703 1.18287 0.88364 0.85755 1.01745 1.86284 1.16071 1.27696 1.88819 1.22492 0.81270 0.96443 1.03878 1.20008 0.82531 0.90488 0.77180 1.90799 1.62660 1.38029 1.46866 1.45910 1.05820 1.10144 1.76488 1.21525 0.91449 0.83565 1.02876 1.21885 0.93655 0.97475 0.98611 1.21779 0.95578 1.00765 0.96833 1.26499 0.98629 1.14818 1.08581 0.80494 0.67412 0.67867 0.67575 1.26026 1.10626 1.05214 1.13228 1.26027 1.06556 1.12763 1.09819 1.26766 1.17260 0.97354 1.06373 0.92529 0.92424 0.87895 0.83956 0.86385 0.77591 0.85692 0.84404 0.88867 0.88870 0.76458 0.91072 0.91056 0.90202 0.92076 0.91595 0.90556 0.90312 0.91113 0.91135 0.91128 0.91029 0.91133 0.91179 0.89800 0.90000 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.00 16 2 O -0.30 -1.39 10.28 -34.21 -0.35 -1.75 16 3 C 0.11 0.39 6.70 -39.12 -0.26 0.13 16 4 C -0.14 -0.24 8.60 -39.46 -0.34 -0.57 16 5 C -0.12 -0.07 5.39 -104.61 -0.56 -0.64 16 6 C -0.08 0.05 2.82 36.00 0.10 0.15 16 7 O -0.54 -0.03 12.76 -35.23 -0.45 -0.48 16 8 Si 0.95 -0.96 25.06 -169.99 -4.26 -5.22 16 9 H -0.25 0.24 7.11 56.52 0.40 0.64 16 10 H -0.25 -0.14 7.11 56.52 0.40 0.27 16 11 H -0.25 0.15 7.11 56.52 0.40 0.55 16 12 C -0.12 -0.02 8.66 -39.57 -0.34 -0.37 16 13 C -0.17 -0.07 9.04 -39.46 -0.36 -0.43 16 14 C 0.10 0.33 6.70 -39.12 -0.26 0.07 16 15 O -0.28 -1.25 9.46 -47.35 -0.45 -1.70 16 16 C 0.04 0.00 5.22 36.01 0.19 0.19 16 17 C 0.51 1.26 7.91 -10.98 -0.09 1.17 16 18 O -0.51 -3.97 16.50 -14.35 -0.24 -4.21 16 19 N -0.73 0.68 5.37 -60.29 -0.32 0.35 16 20 C 0.13 -0.04 5.05 -4.04 -0.02 -0.06 16 21 C -0.10 0.24 2.19 -88.77 -0.19 0.05 16 22 C -0.11 0.28 5.16 -25.30 -0.13 0.15 16 23 C -0.40 1.11 5.85 38.29 0.22 1.34 16 24 Si 0.97 -3.56 13.36 -169.99 -2.27 -5.83 16 25 C -0.44 1.11 8.65 101.05 0.87 1.99 16 26 C -0.44 0.96 8.65 101.05 0.87 1.83 16 27 C -0.39 1.01 5.29 38.71 0.20 1.22 16 28 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 30 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.14 0.06 6.30 -52.49 -0.33 -0.27 16 32 H 0.12 -0.17 7.96 -51.93 -0.41 -0.58 16 33 H 0.38 -1.14 8.70 45.56 0.40 -0.74 16 34 H 0.13 -0.19 4.86 -52.49 -0.26 -0.44 16 35 H 0.14 -0.36 6.30 -52.49 -0.33 -0.69 16 36 H 0.09 -0.25 7.65 -51.93 -0.40 -0.65 16 37 H 0.09 -0.26 7.68 -51.93 -0.40 -0.66 16 38 H 0.40 -1.66 7.84 -40.82 -0.32 -1.98 16 39 H 0.07 0.06 8.07 -51.93 -0.42 -0.36 16 40 H 0.07 0.07 8.14 -51.93 -0.42 -0.36 16 41 H 0.08 -0.26 8.13 -51.93 -0.42 -0.69 16 42 H 0.06 -0.19 7.55 -51.92 -0.39 -0.58 16 43 H 0.07 -0.12 8.04 -51.93 -0.42 -0.53 16 44 H 0.08 -0.22 8.04 -51.93 -0.42 -0.64 16 45 H 0.08 -0.19 8.04 -51.93 -0.42 -0.61 16 46 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 47 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 48 H 0.07 -0.17 7.96 -51.93 -0.41 -0.59 16 49 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 50 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 51 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 52 H 0.08 -0.18 8.03 -51.93 -0.42 -0.60 16 53 H 0.08 -0.21 8.06 -51.93 -0.42 -0.63 16 LS Contribution 426.44 15.07 6.43 6.43 Total: 0.00 -10.21 426.44 -9.30 -19.51 By element: Atomic # 1 Polarization: -6.04 SS G_CDS: -8.29 Total: -14.33 kcal Atomic # 6 Polarization: 6.32 SS G_CDS: 0.90 Total: 7.22 kcal Atomic # 7 Polarization: 0.68 SS G_CDS: -0.32 Total: 0.35 kcal Atomic # 8 Polarization: -6.64 SS G_CDS: -1.49 Total: -8.13 kcal Atomic # 14 Polarization: -4.52 SS G_CDS: -6.53 Total: -11.05 kcal Total LS contribution 6.43 Total: 6.43 kcal Total: -10.21 -9.30 -19.51 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_60476.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -141.693 kcal (2) G-P(sol) polarization free energy of solvation -10.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.899 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.509 kcal (6) G-S(sol) free energy of system = (1) + (5) -161.202 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds