Wall clock time and date at job start Sun Mar 7 2021 10:22:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86298 * 1 3 3 C 1.86298 * 111.24174 * 2 1 4 4 C 1.89338 * 111.45914 * 125.06523 * 2 1 3 5 5 C 1.55142 * 101.34667 * 120.85141 * 4 2 1 6 6 C 1.53573 * 111.29462 * 331.41516 * 5 4 2 7 7 C 1.52998 * 109.47298 * 169.06014 * 6 5 4 8 8 N 1.46506 * 109.47237 * 66.45247 * 7 6 5 9 9 C 1.34773 * 119.99969 * 179.72043 * 8 7 6 10 10 O 1.21281 * 120.00220 * 0.02562 * 9 8 7 11 11 C 1.50706 * 120.00080 * 180.02562 * 9 8 7 12 12 O 1.42898 * 109.47060 * 180.02562 * 11 9 8 13 13 C 1.35918 * 116.99533 * 179.97438 * 12 11 9 14 14 C 1.38674 * 120.06140 * 359.73202 * 13 12 11 15 15 C 1.38186 * 119.95529 * 179.72069 * 14 13 12 16 16 C 1.38246 * 120.07200 * 0.52571 * 15 14 13 17 17 C 1.50693 * 119.94284 * 179.74617 * 16 15 14 18 18 O 1.42902 * 109.46925 * 120.02120 * 17 16 15 19 19 Si 1.86300 * 109.47145 * 0.02562 * 17 16 15 20 20 H 1.48501 * 109.47371 * 60.00238 * 19 17 16 21 21 H 1.48501 * 109.46925 * 179.97438 * 19 17 16 22 22 H 1.48497 * 109.47382 * 300.00077 * 19 17 16 23 23 C 1.38287 * 120.11518 * 359.76895 * 16 15 14 24 24 C 1.38197 * 120.04683 * 359.95692 * 23 16 15 25 25 Br 1.89098 * 120.03612 * 179.97438 * 24 23 16 26 26 C 1.55911 * 109.50587 * 49.03701 * 6 5 4 27 27 H 1.09004 * 109.46992 * 294.93512 * 1 2 3 28 28 H 1.09002 * 109.46729 * 54.93504 * 1 2 3 29 29 H 1.08994 * 109.47456 * 174.93384 * 1 2 3 30 30 H 1.09005 * 109.47313 * 185.06353 * 3 2 1 31 31 H 1.09001 * 109.47335 * 305.06319 * 3 2 1 32 32 H 1.08997 * 109.47335 * 65.06423 * 3 2 1 33 33 H 1.08998 * 111.04506 * 2.83576 * 4 2 1 34 34 H 1.08998 * 111.08093 * 238.88692 * 4 2 1 35 35 H 1.09007 * 109.12357 * 210.92552 * 5 4 2 36 36 H 1.09005 * 109.12694 * 91.90068 * 5 4 2 37 37 H 1.08996 * 109.47145 * 289.05960 * 6 5 4 38 38 H 1.09001 * 109.47671 * 306.45587 * 7 6 5 39 39 H 1.08998 * 109.47454 * 186.45584 * 7 6 5 40 40 H 0.97005 * 119.99811 * 0.02562 * 8 7 6 41 41 H 1.09004 * 109.46762 * 300.00389 * 11 9 8 42 42 H 1.08998 * 109.46924 * 59.99727 * 11 9 8 43 43 H 1.08003 * 120.02195 * 359.97438 * 14 13 12 44 44 H 1.08003 * 119.96572 * 180.27249 * 15 14 13 45 45 H 1.08996 * 109.47515 * 240.02312 * 17 16 15 46 46 H 0.96705 * 113.99896 * 180.02562 * 18 17 16 47 47 H 1.07993 * 119.97977 * 179.97438 * 23 16 15 48 48 H 1.08999 * 111.42569 * 76.90583 * 26 6 5 49 49 H 1.08993 * 111.42505 * 201.85203 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5380 1.7364 0.0000 4 6 2.5557 -1.0124 1.4423 5 6 3.3933 -2.0805 0.6910 6 6 2.8147 -2.3637 -0.7031 7 6 3.8086 -3.2049 -1.5065 8 7 3.9329 -4.5304 -0.8950 9 6 4.7550 -5.4492 -1.4394 10 8 5.3922 -5.1786 -2.4352 11 6 4.8824 -6.8129 -0.8107 12 8 5.8063 -7.6004 -1.5645 13 6 6.0374 -8.8667 -1.1279 14 6 5.3929 -9.3392 0.0053 15 6 5.6250 -10.6289 0.4439 16 6 6.5074 -11.4448 -0.2395 17 6 6.7627 -12.8487 0.2447 18 8 6.3988 -13.7787 -0.7775 19 14 5.7451 -13.1740 1.7709 20 1 4.3042 -13.0162 1.4481 21 1 5.9963 -14.5578 2.2476 22 1 6.1231 -12.2077 2.8332 23 6 7.1564 -10.9745 -1.3664 24 6 6.9235 -9.6874 -1.8126 25 35 7.8118 -9.0445 -3.3532 26 6 2.5568 -1.0160 -1.4434 27 1 -0.3633 0.4333 0.9319 28 1 -0.3633 0.5904 -0.8412 29 1 -0.3634 -1.0236 -0.0907 30 1 3.6237 1.7042 -0.0907 31 1 2.1193 2.2890 -0.8412 32 1 2.2658 2.2321 0.9318 33 1 1.7532 -1.4764 2.0158 34 1 3.1882 -0.3988 2.0838 35 1 3.3971 -3.0037 1.2705 36 1 4.4176 -1.7225 0.5866 37 1 1.8757 -2.9080 -0.6030 38 1 4.7816 -2.7135 -1.5094 39 1 3.4514 -3.3094 -2.5310 40 1 3.4201 -4.7482 -0.1009 41 1 5.2442 -6.7090 0.2123 42 1 3.9085 -7.3022 -0.8037 43 1 4.7067 -8.7011 0.5424 44 1 5.1198 -10.9986 1.3240 45 1 7.8203 -12.9647 0.4816 46 1 6.5366 -14.7044 -0.5343 47 1 7.8455 -11.6135 -1.8984 48 1 3.4839 -0.5866 -1.8231 49 1 1.8203 -1.1330 -2.2382 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:05 Heat of formation + Delta-G solvation = -121.669978 kcal Electronic energy + Delta-G solvation = -28071.698165 eV Core-core repulsion = 23975.522811 eV Total energy + Delta-G solvation = -4096.175354 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 415.077 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -41.64018 -40.60926 -39.11022 -37.88442 -37.28977 -34.73722 -33.57941 -32.05138 -31.04451 -30.33906 -29.63462 -29.28767 -28.58041 -26.86692 -26.12293 -24.24954 -23.82417 -22.27932 -21.61318 -20.90313 -19.60015 -18.64011 -18.35093 -17.57095 -17.34386 -17.04712 -16.73113 -16.32847 -15.95356 -15.84055 -15.62590 -15.29051 -14.81811 -14.63094 -14.62033 -14.51234 -14.08065 -14.07538 -14.02185 -13.98422 -13.68398 -13.62886 -13.51458 -13.39719 -13.26865 -12.73098 -12.65236 -12.37919 -12.34082 -12.23679 -12.01947 -11.98006 -11.85975 -11.73632 -11.58252 -10.98657 -10.96910 -10.95360 -10.55915 -10.48230 -10.43291 -10.12963 -9.90119 -9.25145 -0.03466 0.13605 0.77226 1.06908 1.33846 1.37022 1.40578 1.52848 1.53930 1.76731 1.80080 1.80944 2.37630 2.43386 2.52006 3.26333 3.42418 3.57816 3.64340 3.72258 3.76734 3.84701 3.87768 3.88252 3.95246 4.06395 4.24519 4.38235 4.40822 4.44169 4.48031 4.61495 4.61751 4.63367 4.65565 4.66709 4.68682 4.81844 4.84537 4.94061 4.95525 5.03024 5.14854 5.23894 5.24824 5.32969 5.36175 5.42371 5.44696 5.46197 6.02581 6.35906 6.51209 7.12587 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.443 4.443 2 Si 0.969 3.031 3 C -0.444 4.444 4 C -0.399 4.399 5 C -0.112 4.112 6 C -0.098 4.098 7 C 0.129 3.871 8 N -0.728 5.728 9 C 0.514 3.486 10 O -0.507 6.507 11 C 0.036 3.964 12 O -0.273 6.273 13 C 0.160 3.840 14 C -0.199 4.199 15 C -0.067 4.067 16 C -0.107 4.107 17 C -0.077 4.077 18 O -0.544 6.544 19 Si 0.944 3.056 20 H -0.246 1.246 21 H -0.254 1.254 22 H -0.249 1.249 23 C -0.020 4.020 24 C -0.123 4.123 25 Br -0.025 7.025 26 C -0.391 4.391 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.070 0.930 30 H 0.071 0.929 31 H 0.070 0.930 32 H 0.069 0.931 33 H 0.076 0.924 34 H 0.078 0.922 35 H 0.060 0.940 36 H 0.065 0.935 37 H 0.080 0.920 38 H 0.071 0.929 39 H 0.072 0.928 40 H 0.401 0.599 41 H 0.097 0.903 42 H 0.097 0.903 43 H 0.141 0.859 44 H 0.130 0.870 45 H 0.079 0.921 46 H 0.382 0.618 47 H 0.145 0.855 48 H 0.083 0.917 49 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.651 0.058 6.676 7.609 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.167 2.833 3 C -0.552 4.552 4 C -0.485 4.485 5 C -0.149 4.149 6 C -0.116 4.116 7 C 0.006 3.994 8 N -0.383 5.383 9 C 0.298 3.702 10 O -0.381 6.381 11 C -0.043 4.043 12 O -0.185 6.185 13 C 0.111 3.889 14 C -0.219 4.219 15 C -0.086 4.086 16 C -0.109 4.109 17 C -0.188 4.188 18 O -0.350 6.350 19 Si 0.766 3.234 20 H -0.170 1.170 21 H -0.178 1.178 22 H -0.173 1.173 23 C -0.040 4.040 24 C -0.203 4.203 25 Br 0.061 6.939 26 C -0.478 4.478 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.089 0.911 30 H 0.090 0.910 31 H 0.089 0.911 32 H 0.088 0.912 33 H 0.094 0.906 34 H 0.097 0.903 35 H 0.079 0.921 36 H 0.084 0.916 37 H 0.098 0.902 38 H 0.090 0.910 39 H 0.090 0.910 40 H 0.236 0.764 41 H 0.115 0.885 42 H 0.115 0.885 43 H 0.158 0.842 44 H 0.147 0.853 45 H 0.097 0.903 46 H 0.229 0.771 47 H 0.163 0.837 48 H 0.102 0.898 49 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges -3.417 1.050 5.596 6.640 hybrid contribution -0.178 -0.816 0.889 1.220 sum -3.595 0.234 6.484 7.418 Atomic orbital electron populations 1.26027 1.19990 1.04538 1.04548 0.80493 0.67495 0.67486 0.67868 1.26027 1.06668 1.17983 1.04492 1.26498 1.05162 1.06676 1.10198 1.21778 0.99901 0.99174 0.94090 1.21887 0.98554 0.96525 0.94669 1.21532 0.99929 0.80904 0.97025 1.45902 1.46115 1.14163 1.32118 1.19941 0.80129 0.85410 0.84757 1.90811 1.43627 1.79371 1.24264 1.22566 0.94755 0.90741 0.96189 1.86289 1.59721 1.21242 1.51204 1.18622 0.93648 0.84199 0.92382 1.21105 1.04800 0.97873 0.98093 1.20885 0.95406 0.93413 0.98853 1.19162 0.99600 0.94652 0.97460 1.24662 1.05064 0.88450 1.00608 1.86516 1.88717 1.18848 1.40944 0.85784 0.80536 0.81216 0.75822 1.16982 1.17794 1.17277 1.20842 0.97056 0.91917 0.94143 1.21135 1.03897 0.96256 0.98982 1.96800 1.75962 1.88151 1.33015 1.26766 1.06860 1.03795 1.10335 0.91113 0.91128 0.91127 0.91026 0.91128 0.91178 0.90553 0.90305 0.92093 0.91591 0.90198 0.91035 0.91016 0.76447 0.88544 0.88539 0.84152 0.85271 0.90276 0.77075 0.83709 0.89791 0.89989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 1.15 8.65 101.05 0.87 2.02 16 2 Si 0.97 -3.66 13.36 -169.99 -2.27 -5.93 16 3 C -0.44 1.00 8.65 101.05 0.87 1.87 16 4 C -0.40 1.17 5.85 38.29 0.22 1.40 16 5 C -0.11 0.31 5.16 -25.30 -0.13 0.18 16 6 C -0.10 0.26 2.19 -88.77 -0.19 0.07 16 7 C 0.13 -0.08 5.05 -4.04 -0.02 -0.10 16 8 N -0.73 1.01 5.37 -60.29 -0.32 0.69 16 9 C 0.51 0.90 7.91 -10.98 -0.09 0.82 16 10 O -0.51 -3.54 16.50 -14.35 -0.24 -3.78 16 11 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 12 O -0.27 -0.91 9.01 -39.39 -0.35 -1.26 16 13 C 0.16 0.40 6.68 -39.20 -0.26 0.14 16 14 C -0.20 0.00 9.04 -39.44 -0.36 -0.36 16 15 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 16 C -0.11 -0.11 5.42 -104.60 -0.57 -0.67 16 17 C -0.08 0.08 2.81 36.00 0.10 0.18 16 18 O -0.54 0.19 12.74 -35.23 -0.45 -0.26 16 19 Si 0.94 -1.46 25.07 -169.99 -4.26 -5.72 16 20 H -0.25 0.06 7.11 56.52 0.40 0.47 16 21 H -0.25 0.32 7.11 56.52 0.40 0.72 16 22 H -0.25 0.31 7.11 56.52 0.40 0.72 16 23 C -0.02 -0.04 9.35 -39.58 -0.37 -0.41 16 24 C -0.12 -0.41 6.24 -39.37 -0.25 -0.66 16 25 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.36 16 26 C -0.39 1.07 5.29 38.71 0.20 1.27 16 27 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 28 H 0.07 -0.16 7.96 -51.93 -0.41 -0.58 16 29 H 0.07 -0.18 7.96 -51.93 -0.41 -0.59 16 30 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 31 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 32 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 33 H 0.08 -0.23 8.04 -51.93 -0.42 -0.65 16 34 H 0.08 -0.20 8.04 -51.93 -0.42 -0.62 16 35 H 0.06 -0.20 7.55 -51.92 -0.39 -0.59 16 36 H 0.07 -0.13 8.04 -51.93 -0.42 -0.55 16 37 H 0.08 -0.28 8.13 -51.93 -0.42 -0.70 16 38 H 0.07 0.04 8.07 -51.93 -0.42 -0.38 16 39 H 0.07 0.05 8.14 -51.93 -0.42 -0.38 16 40 H 0.40 -1.83 7.84 -40.82 -0.32 -2.15 16 41 H 0.10 -0.34 7.65 -51.93 -0.40 -0.74 16 42 H 0.10 -0.33 7.68 -51.93 -0.40 -0.73 16 43 H 0.14 -0.45 6.30 -52.48 -0.33 -0.79 16 44 H 0.13 -0.22 4.87 -52.48 -0.26 -0.48 16 45 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 46 H 0.38 -1.80 8.74 45.56 0.40 -1.41 16 47 H 0.15 0.16 8.06 -52.49 -0.42 -0.26 16 48 H 0.08 -0.19 8.03 -51.93 -0.42 -0.61 16 49 H 0.08 -0.22 8.06 -51.93 -0.42 -0.64 16 LS Contribution 417.66 15.07 6.29 6.29 Total: 0.00 -9.48 417.66 -11.13 -20.60 By element: Atomic # 1 Polarization: -6.65 SS G_CDS: -7.16 Total: -13.81 kcal Atomic # 6 Polarization: 5.65 SS G_CDS: -0.11 Total: 5.54 kcal Atomic # 7 Polarization: 1.01 SS G_CDS: -0.32 Total: 0.69 kcal Atomic # 8 Polarization: -4.27 SS G_CDS: -1.04 Total: -5.31 kcal Atomic # 14 Polarization: -5.11 SS G_CDS: -6.53 Total: -11.65 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.29 Total: 6.29 kcal Total: -9.48 -11.13 -20.60 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -101.066 kcal (2) G-P(sol) polarization free energy of solvation -9.476 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -110.542 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.128 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.604 kcal (6) G-S(sol) free energy of system = (1) + (5) -121.670 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds