Wall clock time and date at job start Sun Mar 7 2021 10:22:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86302 * 1 3 3 C 1.86296 * 111.29248 * 2 1 4 4 C 1.89522 * 111.50035 * 234.84343 * 2 1 3 5 5 C 1.55142 * 101.35640 * 245.87503 * 4 2 1 6 6 C 1.53579 * 111.29168 * 331.41615 * 5 4 2 7 7 C 1.52995 * 109.47126 * 169.06332 * 6 5 4 8 8 N 1.46499 * 109.47347 * 64.95551 * 7 6 5 9 9 C 1.34772 * 120.00390 * 179.97438 * 8 7 6 10 10 O 1.21703 * 119.99877 * 0.02562 * 9 8 7 11 11 C 1.46675 * 120.00641 * 180.02562 * 9 8 7 12 12 C 1.37869 * 126.23871 * 179.69106 * 11 9 8 13 13 C 1.39832 * 107.08731 * 179.84877 * 12 11 9 14 14 C 1.35459 * 107.86449 * 0.41866 * 13 12 11 15 15 C 1.50695 * 125.56269 * 179.72175 * 14 13 12 16 16 O 1.42902 * 109.47158 * 120.02683 * 15 14 13 17 17 Si 1.86294 * 109.47495 * 0.02562 * 15 14 13 18 18 H 1.48501 * 109.47275 * 60.00024 * 17 15 14 19 19 H 1.48502 * 109.47440 * 180.02562 * 17 15 14 20 20 H 1.48505 * 109.47220 * 300.00032 * 17 15 14 21 21 N 1.35528 * 108.86822 * 359.74006 * 14 13 12 22 22 C 1.55915 * 109.50369 * 49.04142 * 6 5 4 23 23 H 1.08996 * 109.47140 * 294.89926 * 1 2 3 24 24 H 1.09003 * 109.46829 * 54.89548 * 1 2 3 25 25 H 1.08996 * 109.47108 * 174.89587 * 1 2 3 26 26 H 1.08994 * 109.47400 * 185.10569 * 3 2 1 27 27 H 1.09005 * 109.47314 * 305.10736 * 3 2 1 28 28 H 1.09006 * 109.47297 * 65.10365 * 3 2 1 29 29 H 1.08998 * 111.03441 * 127.85278 * 4 2 1 30 30 H 1.09008 * 111.08072 * 3.91071 * 4 2 1 31 31 H 1.09003 * 109.12430 * 210.93608 * 5 4 2 32 32 H 1.09003 * 109.12868 * 91.90331 * 5 4 2 33 33 H 1.08998 * 109.47087 * 289.01591 * 6 5 4 34 34 H 1.09005 * 109.47049 * 184.95682 * 7 6 5 35 35 H 1.08998 * 109.47561 * 304.95752 * 7 6 5 36 36 H 0.96999 * 119.99704 * 0.02562 * 8 7 6 37 37 H 1.08000 * 126.45665 * 0.02562 * 12 11 9 38 38 H 1.07999 * 126.07406 * 180.16004 * 13 12 11 39 39 H 1.08998 * 109.46969 * 240.01933 * 15 14 13 40 40 H 0.96701 * 113.99636 * 299.99344 * 16 15 14 41 41 H 0.97006 * 125.67942 * 179.97438 * 21 14 13 42 42 H 1.09002 * 111.42836 * 76.90973 * 22 6 5 43 43 H 1.09001 * 111.42626 * 201.79891 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8630 0.0000 0.0000 3 6 2.5395 1.7358 0.0000 4 6 2.5576 -1.0154 -1.4417 5 6 3.2480 -2.1828 -0.6884 6 6 3.7201 -1.7450 0.7059 7 6 4.1423 -2.9756 1.5110 8 7 5.3118 -3.5936 0.8812 9 6 5.8623 -4.6992 1.4206 10 8 5.3876 -5.1845 2.4307 11 6 7.0335 -5.3177 0.7904 12 6 7.6996 -6.4405 1.2334 13 6 8.7459 -6.6781 0.3367 14 6 8.7074 -5.7121 -0.6122 15 6 9.6610 -5.5843 -1.7719 16 8 8.9321 -5.6607 -2.9987 17 14 10.9097 -6.9652 -1.7045 18 1 10.2077 -8.2715 -1.7825 19 1 11.8498 -6.8389 -2.8470 20 1 11.6672 -6.8858 -0.4297 21 7 7.6715 -4.8792 -0.3478 22 6 2.5568 -1.0151 1.4440 23 1 -0.3633 0.4327 0.9321 24 1 -0.3633 0.5910 -0.8408 25 1 -0.3633 -1.0235 -0.0914 26 1 3.6251 1.7027 -0.0914 27 1 2.1208 2.2890 -0.8407 28 1 2.2684 2.2315 0.9322 29 1 3.2819 -0.4364 -2.0148 30 1 1.7572 -1.3828 -2.0839 31 1 4.1078 -2.5218 -1.2664 32 1 2.5427 -3.0073 -0.5841 33 1 4.5687 -1.0682 0.6063 34 1 4.3936 -2.6755 2.5283 35 1 3.3218 -3.6926 1.5359 36 1 5.6904 -3.2066 0.0763 37 1 7.4571 -7.0278 2.1067 38 1 9.4607 -7.4857 0.3930 39 1 10.1762 -4.6254 -1.7147 40 1 8.4479 -6.4893 -3.1174 41 1 7.4214 -4.1029 -0.8731 42 1 1.8198 -1.7228 1.8236 43 1 2.9319 -0.3711 2.2394 RHF calculation, no. of doubly occupied orbitals= 53 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17310366_6580494.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 10:22:26 Heat of formation + Delta-G solvation = -82.243558 kcal Electronic energy + Delta-G solvation = -21604.528141 eV Core-core repulsion = 18386.900488 eV Total energy + Delta-G solvation = -3217.627652 eV No. of doubly occupied orbitals = 53 Molecular weight (most abundant/longest-lived isotopes) = 296.147 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -42.49018 -40.27756 -37.97293 -37.71998 -34.74884 -32.22872 -31.49279 -30.52085 -29.30968 -28.58687 -27.71454 -26.12064 -24.20732 -22.97770 -21.55631 -21.26289 -20.84008 -19.74494 -18.20286 -17.15010 -16.76047 -16.55911 -16.32694 -15.87712 -15.51853 -15.13159 -14.96881 -14.87289 -14.55539 -14.31741 -14.06587 -14.04018 -14.01017 -13.76347 -13.73089 -13.57475 -13.41927 -13.26860 -12.72136 -12.40639 -12.36028 -12.17759 -12.02445 -11.92170 -11.58396 -11.19892 -10.97245 -10.77398 -10.57023 -10.48595 -10.14700 -10.05904 -9.23369 0.39291 0.97392 1.42465 1.46941 1.49445 1.60231 1.76443 1.79733 1.81474 2.07553 2.15996 2.43350 2.44843 3.26579 3.53951 3.64810 3.79731 3.90583 3.96062 4.24457 4.27547 4.37857 4.39627 4.42736 4.48897 4.61281 4.63252 4.65430 4.66066 4.69359 4.84692 4.93251 5.01654 5.02718 5.09091 5.14611 5.25736 5.32637 5.36518 5.42421 5.44394 5.60653 5.83785 6.22611 6.32788 6.46176 7.16864 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.443 4.443 2 Si 0.968 3.032 3 C -0.443 4.443 4 C -0.399 4.399 5 C -0.111 4.111 6 C -0.098 4.098 7 C 0.128 3.872 8 N -0.732 5.732 9 C 0.588 3.412 10 O -0.525 6.525 11 C -0.050 4.050 12 C -0.098 4.098 13 C -0.207 4.207 14 C 0.021 3.979 15 C -0.068 4.068 16 O -0.542 6.542 17 Si 0.978 3.022 18 H -0.247 1.247 19 H -0.253 1.253 20 H -0.247 1.247 21 N -0.522 5.522 22 C -0.391 4.391 23 H 0.070 0.930 24 H 0.069 0.931 25 H 0.071 0.929 26 H 0.069 0.931 27 H 0.070 0.930 28 H 0.070 0.930 29 H 0.075 0.925 30 H 0.078 0.922 31 H 0.058 0.942 32 H 0.066 0.934 33 H 0.078 0.922 34 H 0.072 0.928 35 H 0.072 0.928 36 H 0.394 0.606 37 H 0.152 0.848 38 H 0.146 0.854 39 H 0.120 0.880 40 H 0.381 0.619 41 H 0.417 0.583 42 H 0.084 0.916 43 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.437 2.599 -3.305 4.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.551 4.551 2 Si 1.165 2.835 3 C -0.551 4.551 4 C -0.485 4.485 5 C -0.149 4.149 6 C -0.117 4.117 7 C 0.005 3.995 8 N -0.384 5.384 9 C 0.375 3.625 10 O -0.401 6.401 11 C -0.164 4.164 12 C -0.124 4.124 13 C -0.231 4.231 14 C -0.097 4.097 15 C -0.178 4.178 16 O -0.348 6.348 17 Si 0.798 3.202 18 H -0.171 1.171 19 H -0.177 1.177 20 H -0.170 1.170 21 N -0.118 5.118 22 C -0.477 4.477 23 H 0.089 0.911 24 H 0.088 0.912 25 H 0.090 0.910 26 H 0.089 0.911 27 H 0.089 0.911 28 H 0.089 0.911 29 H 0.094 0.906 30 H 0.097 0.903 31 H 0.077 0.923 32 H 0.085 0.915 33 H 0.097 0.903 34 H 0.090 0.910 35 H 0.090 0.910 36 H 0.227 0.773 37 H 0.170 0.830 38 H 0.164 0.836 39 H 0.138 0.862 40 H 0.229 0.771 41 H 0.254 0.746 42 H 0.102 0.898 43 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.819 2.360 -2.669 3.655 hybrid contribution -0.442 0.396 -0.538 0.802 sum 0.377 2.756 -3.207 4.246 Atomic orbital electron populations 1.26017 1.19951 1.04631 1.04532 0.80526 0.67549 0.67505 0.67877 1.26025 1.06550 1.17932 1.04575 1.26519 1.05572 1.06226 1.10151 1.21772 1.00417 0.98629 0.94082 1.21887 0.99037 0.96080 0.94683 1.21528 0.87127 0.94098 0.96754 1.45983 1.32769 1.29052 1.30622 1.17057 0.81764 0.79910 0.83726 1.90878 1.62200 1.62836 1.24154 1.20487 1.00595 1.02102 0.93195 1.21313 0.95044 0.95768 1.00306 1.20725 1.03035 1.01746 0.97608 1.21099 0.93786 0.94479 1.00351 1.24903 0.98526 1.12915 0.81459 1.86507 1.67988 1.43749 1.36517 0.85252 0.77351 0.76201 0.81409 1.17055 1.17672 1.17001 1.41919 1.23999 1.24211 1.21690 1.26760 1.02721 1.07869 1.10337 0.91067 0.91185 0.91020 0.91143 0.91108 0.91084 0.90580 0.90286 0.92349 0.91549 0.90337 0.90969 0.90977 0.77251 0.82985 0.83628 0.86232 0.77120 0.74551 0.89756 0.89990 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.44 0.92 8.65 101.05 0.87 1.79 16 2 Si 0.97 -3.36 13.37 -169.99 -2.27 -5.64 16 3 C -0.44 1.03 8.65 101.05 0.87 1.91 16 4 C -0.40 0.99 5.85 38.29 0.22 1.21 16 5 C -0.11 0.23 5.14 -25.30 -0.13 0.10 16 6 C -0.10 0.21 2.21 -88.76 -0.20 0.01 16 7 C 0.13 0.00 5.06 -4.04 -0.02 -0.02 16 8 N -0.73 0.03 5.35 -61.62 -0.33 -0.30 16 9 C 0.59 1.86 7.79 -12.86 -0.10 1.76 16 10 O -0.52 -3.72 16.88 5.19 0.09 -3.64 16 11 C -0.05 -0.10 7.06 -81.98 -0.58 -0.68 16 12 C -0.10 -0.23 10.65 -39.12 -0.42 -0.64 16 13 C -0.21 -0.14 9.32 -39.98 -0.37 -0.52 16 14 C 0.02 -0.01 6.47 -81.95 -0.53 -0.54 16 15 C -0.07 0.14 3.08 36.00 0.11 0.25 16 16 O -0.54 0.81 12.88 -35.23 -0.45 0.35 16 17 Si 0.98 -1.85 25.82 -169.99 -4.39 -6.24 16 18 H -0.25 0.35 7.11 56.52 0.40 0.75 16 19 H -0.25 0.13 7.11 56.52 0.40 0.54 16 20 H -0.25 0.26 7.11 56.52 0.40 0.66 16 21 N -0.52 0.33 5.99 -5.70 -0.03 0.30 16 22 C -0.39 0.95 5.28 38.71 0.20 1.15 16 23 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 24 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 25 H 0.07 -0.13 7.96 -51.93 -0.41 -0.54 16 26 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 27 H 0.07 -0.15 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.15 7.96 -51.93 -0.41 -0.57 16 29 H 0.08 -0.19 8.04 -51.93 -0.42 -0.61 16 30 H 0.08 -0.17 8.05 -51.92 -0.42 -0.59 16 31 H 0.06 -0.14 7.46 -51.93 -0.39 -0.53 16 32 H 0.07 -0.09 8.06 -51.93 -0.42 -0.51 16 33 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 34 H 0.07 0.08 8.14 -51.93 -0.42 -0.35 16 35 H 0.07 0.07 8.10 -51.93 -0.42 -0.35 16 36 H 0.39 -1.05 6.87 -40.82 -0.28 -1.33 16 37 H 0.15 0.32 8.06 -52.49 -0.42 -0.10 16 38 H 0.15 -0.12 6.17 -52.49 -0.32 -0.45 16 39 H 0.12 -0.36 7.96 -51.93 -0.41 -0.77 16 40 H 0.38 -1.61 8.70 45.56 0.40 -1.21 16 41 H 0.42 -1.28 8.19 -40.82 -0.33 -1.62 16 42 H 0.08 -0.18 8.03 -51.93 -0.42 -0.60 16 43 H 0.08 -0.20 8.06 -51.93 -0.42 -0.62 16 LS Contribution 352.63 15.07 5.31 5.31 Total: 0.00 -7.20 352.63 -8.53 -15.73 By element: Atomic # 1 Polarization: -5.27 SS G_CDS: -6.40 Total: -11.67 kcal Atomic # 6 Polarization: 5.85 SS G_CDS: -0.06 Total: 5.79 kcal Atomic # 7 Polarization: 0.36 SS G_CDS: -0.36 Total: -0.01 kcal Atomic # 8 Polarization: -2.92 SS G_CDS: -0.37 Total: -3.28 kcal Atomic # 14 Polarization: -5.21 SS G_CDS: -6.66 Total: -11.88 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -7.20 -8.53 -15.73 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17310366_6580494.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -66.511 kcal (2) G-P(sol) polarization free energy of solvation -7.199 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -73.711 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.533 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.732 kcal (6) G-S(sol) free energy of system = (1) + (5) -82.244 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.44 seconds