Wall clock time and date at job start Sun Mar 7 2021 08:14:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35891 * 116.99873 * 2 1 4 4 C 1.38823 * 119.93269 * 180.02562 * 3 2 1 5 5 C 1.37925 * 120.05949 * 179.97438 * 4 3 2 6 6 C 1.39349 * 119.93886 * 359.97438 * 5 4 3 7 7 C 1.48412 * 120.06583 * 179.97438 * 6 5 4 8 8 N 1.31621 * 126.03423 * 324.96855 * 7 6 5 9 9 N 1.40073 * 108.10708 * 180.02562 * 8 7 6 10 10 C 1.46501 * 125.92736 * 179.73411 * 9 8 7 11 11 C 1.50697 * 109.47380 * 305.02754 * 10 9 8 12 12 O 1.21281 * 120.00009 * 0.02562 * 11 10 9 13 13 N 1.34776 * 120.00112 * 180.02562 * 11 10 9 14 14 C 1.46497 * 120.00298 * 180.02562 * 13 11 10 15 15 H 1.08999 * 112.84830 * 25.32788 * 14 13 11 16 16 C 1.53776 * 113.61625 * 156.52926 * 14 13 11 17 17 C 1.53774 * 87.08333 * 89.11487 * 16 14 13 18 18 O 1.42897 * 113.61435 * 270.79994 * 17 16 14 19 19 C 1.42906 * 113.99973 * 294.79861 * 18 17 16 20 20 C 1.53000 * 113.61607 * 139.98057 * 17 16 14 21 21 F 1.39904 * 109.47060 * 54.71468 * 20 17 16 22 22 F 1.39900 * 109.47464 * 174.71597 * 20 17 16 23 23 F 1.39897 * 109.47434 * 294.71513 * 20 17 16 24 24 C 1.53782 * 113.61049 * 254.13712 * 14 13 11 25 25 C 1.35032 * 108.13986 * 0.02562 * 9 8 7 26 26 C 1.35082 * 107.98317 * 359.97438 * 25 9 8 27 27 C 1.50699 * 126.07984 * 179.97438 * 26 25 9 28 28 O 1.42903 * 109.47017 * 255.02531 * 27 26 25 29 29 Si 1.86305 * 109.46802 * 15.02105 * 27 26 25 30 30 C 1.39356 * 119.87160 * 0.24386 * 6 5 4 31 31 C 1.37924 * 119.93523 * 359.52026 * 30 6 5 32 32 H 1.09009 * 109.47096 * 300.00521 * 1 2 3 33 33 H 1.09002 * 109.46736 * 59.99752 * 1 2 3 34 34 H 1.08999 * 109.47066 * 180.02562 * 1 2 3 35 35 H 1.07991 * 119.96932 * 359.97438 * 4 3 2 36 36 H 1.08002 * 120.02766 * 179.97438 * 5 4 3 37 37 H 1.08998 * 109.47101 * 65.02988 * 10 9 8 38 38 H 1.09006 * 109.46986 * 185.02533 * 10 9 8 39 39 H 0.97001 * 119.99669 * 359.97438 * 13 11 10 40 40 H 1.09003 * 113.61551 * 203.66261 * 16 14 13 41 41 H 1.09003 * 113.61798 * 334.47539 * 16 14 13 42 42 H 1.08995 * 109.46739 * 62.40413 * 19 18 17 43 43 H 1.08999 * 109.47053 * 182.40534 * 19 18 17 44 44 H 1.08998 * 109.46979 * 302.40489 * 19 18 17 45 45 H 1.08997 * 113.62049 * 25.42661 * 24 14 13 46 46 H 1.09003 * 113.61547 * 156.33279 * 24 14 13 47 47 H 1.07999 * 126.00631 * 179.97438 * 25 9 8 48 48 H 1.08991 * 109.47347 * 135.02192 * 27 26 25 49 49 H 0.96699 * 114.00226 * 59.99437 * 28 27 26 50 50 H 1.48505 * 109.99815 * 180.02562 * 29 27 26 51 51 H 1.48493 * 109.99941 * 301.31929 * 29 27 26 52 52 H 1.08005 * 120.03136 * 179.73034 * 30 6 5 53 53 H 1.08001 * 119.96987 * 180.22875 * 31 30 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0459 1.2108 0.0000 4 6 3.4323 1.2819 -0.0005 5 6 4.0612 2.5094 -0.0011 6 6 3.3036 3.6789 -0.0016 7 6 3.9773 5.0013 -0.0016 8 7 5.1051 5.2957 0.6098 9 7 5.3954 6.6435 0.3626 10 6 6.5597 7.3780 0.8636 11 6 6.6201 7.2604 2.3648 12 8 5.7741 6.6252 2.9578 13 7 7.6143 7.8611 3.0484 14 6 7.6733 7.7463 4.5076 15 1 7.1782 6.8504 4.8821 16 6 9.0823 7.9588 5.0858 17 6 8.7390 9.4557 5.1641 18 8 9.0652 10.1807 3.9767 19 6 10.4656 10.2402 3.6982 20 6 9.2510 10.1362 6.4352 21 9 10.6278 9.9203 6.5576 22 9 8.9991 11.5104 6.3623 23 9 8.5942 9.6002 7.5481 24 6 7.2601 9.0317 5.2438 25 6 4.4123 7.1500 -0.4123 26 6 3.5224 6.1632 -0.6550 27 6 2.2656 6.2842 -1.4778 28 8 1.1306 6.3252 -0.6105 29 14 2.3326 7.8485 -2.4875 30 6 1.9120 3.6045 0.0035 31 6 1.2886 2.3742 -0.0009 32 1 -0.3634 0.5140 0.8900 33 1 -0.3633 0.5139 -0.8900 34 1 -0.3633 -1.0277 0.0005 35 1 4.0190 0.3752 -0.0005 36 1 5.1398 2.5641 -0.0011 37 1 7.4677 6.9594 0.4295 38 1 6.4745 8.4283 0.5845 39 1 8.2911 8.3689 2.5740 40 1 9.2293 7.4930 6.0602 41 1 9.8824 7.7291 4.3820 42 1 10.8463 9.2323 3.5330 43 1 10.6332 10.8429 2.8056 44 1 10.9853 10.6908 4.5437 45 1 6.5900 9.6691 4.6670 46 1 6.9098 8.8587 6.2614 47 1 4.3487 8.1656 -0.7742 48 1 2.1832 5.4252 -2.1436 49 1 1.1371 7.0660 0.0111 50 1 1.0985 7.9798 -3.3030 51 1 2.4770 9.0247 -1.5926 52 1 1.3223 4.5093 0.0075 53 1 0.2101 2.3158 -0.0006 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17312452_12622750.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:14:46 Heat of formation + Delta-G solvation = -140.457555 kcal Electronic energy + Delta-G solvation = -44332.778218 eV Core-core repulsion = 38146.625679 eV Total energy + Delta-G solvation = -6186.152539 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.159 amu Computer time = 1.79 seconds Orbital eigenvalues (eV) -51.28170 -48.81966 -48.74863 -42.47590 -41.74536 -40.98244 -40.06250 -38.45774 -37.80370 -37.25443 -34.71761 -34.19346 -32.22238 -31.98560 -31.11564 -29.45194 -28.61254 -28.09277 -27.86083 -26.82000 -25.90627 -24.36009 -23.67555 -23.55985 -22.07231 -21.46807 -21.10684 -20.97085 -19.81640 -19.56478 -19.27639 -19.15076 -18.70603 -18.28034 -17.44136 -17.23349 -17.08605 -16.98265 -16.68988 -16.62274 -16.47531 -16.26523 -16.13697 -15.77699 -15.66834 -15.60693 -15.55452 -15.34439 -15.24991 -15.18931 -14.97964 -14.92061 -14.88517 -14.60315 -14.54216 -14.35499 -14.12171 -13.92933 -13.73746 -13.65054 -13.44150 -13.30454 -13.19901 -13.00115 -12.78653 -12.62603 -12.47939 -12.30790 -12.17620 -12.12148 -11.75215 -11.63854 -11.52857 -11.24926 -10.96777 -10.46356 -10.37687 -10.23816 -10.01784 -9.62264 -8.92522 -4.81148 0.08323 0.36428 0.84380 1.32538 1.44707 1.45624 1.50260 1.67965 1.72658 1.93037 2.07667 2.13474 2.32988 2.51893 2.58480 2.81220 2.81568 3.25963 3.37057 3.39766 3.47341 3.49087 3.61703 3.73848 3.90242 3.92420 3.98429 4.11041 4.17263 4.22495 4.27079 4.29634 4.33182 4.36290 4.38834 4.41616 4.42427 4.46244 4.57363 4.60698 4.61513 4.67686 4.71884 4.72276 4.79908 4.83538 4.92866 5.08894 5.10887 5.33711 5.35119 5.55371 5.60280 5.69666 5.73408 5.95079 6.38680 6.42319 6.60330 6.66704 7.12627 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.334 6.334 3 C 0.123 3.877 4 C -0.167 4.167 5 C -0.059 4.059 6 C -0.070 4.070 7 C 0.119 3.881 8 N -0.293 5.293 9 N -0.359 5.359 10 C 0.110 3.890 11 C 0.500 3.500 12 O -0.560 6.560 13 N -0.693 5.693 14 C 0.135 3.865 15 H 0.102 0.898 16 C -0.148 4.148 17 C 0.046 3.954 18 O -0.339 6.339 19 C 0.001 3.999 20 C 0.432 3.568 21 F -0.183 7.183 22 F -0.187 7.187 23 F -0.179 7.179 24 C -0.131 4.131 25 C 0.075 3.925 26 C -0.262 4.262 27 C -0.050 4.050 28 O -0.547 6.547 29 Si 0.782 3.218 30 C -0.066 4.066 31 C -0.214 4.214 32 H 0.062 0.938 33 H 0.066 0.934 34 H 0.118 0.882 35 H 0.141 0.859 36 H 0.133 0.867 37 H 0.147 0.853 38 H 0.176 0.824 39 H 0.420 0.580 40 H 0.125 0.875 41 H 0.116 0.884 42 H 0.074 0.926 43 H 0.120 0.880 44 H 0.041 0.959 45 H 0.093 0.907 46 H 0.123 0.877 47 H 0.216 0.784 48 H 0.107 0.893 49 H 0.384 0.616 50 H -0.307 1.307 51 H -0.264 1.264 52 H 0.159 0.841 53 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.138 4.687 -5.071 8.607 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.248 6.248 3 C 0.078 3.922 4 C -0.185 4.185 5 C -0.078 4.078 6 C -0.072 4.072 7 C -0.047 4.047 8 N -0.114 5.114 9 N -0.140 5.140 10 C -0.013 4.013 11 C 0.286 3.714 12 O -0.437 6.437 13 N -0.347 5.347 14 C 0.029 3.971 15 H 0.120 0.880 16 C -0.186 4.186 17 C 0.003 3.997 18 O -0.257 6.257 19 C -0.094 4.094 20 C 0.377 3.623 21 F -0.164 7.164 22 F -0.168 7.168 23 F -0.160 7.160 24 C -0.169 4.169 25 C -0.070 4.070 26 C -0.274 4.274 27 C -0.159 4.159 28 O -0.355 6.355 29 Si 0.685 3.315 30 C -0.085 4.085 31 C -0.232 4.232 32 H 0.081 0.919 33 H 0.084 0.916 34 H 0.137 0.863 35 H 0.159 0.841 36 H 0.151 0.849 37 H 0.164 0.836 38 H 0.193 0.807 39 H 0.259 0.741 40 H 0.143 0.857 41 H 0.134 0.866 42 H 0.092 0.908 43 H 0.139 0.861 44 H 0.059 0.941 45 H 0.111 0.889 46 H 0.141 0.859 47 H 0.233 0.767 48 H 0.125 0.875 49 H 0.234 0.766 50 H -0.235 1.235 51 H -0.189 1.189 52 H 0.176 0.824 53 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges 5.093 4.060 -4.451 7.889 hybrid contribution -0.718 0.725 1.332 1.678 sum 4.375 4.786 -3.119 7.195 Atomic orbital electron populations 1.23348 0.76466 1.05585 1.02265 1.86048 1.23448 1.26891 1.88409 1.19348 0.92655 0.84687 0.95554 1.20510 0.91706 0.98853 1.07461 1.21086 1.00113 0.90660 0.95959 1.17886 0.92915 0.89586 1.06832 1.20694 0.93248 0.94062 0.96650 1.77690 1.17507 0.93907 1.22312 1.48098 1.19784 1.07289 1.38859 1.21972 0.88588 1.00564 0.90192 1.21118 0.81182 0.78370 0.90726 1.90836 1.40227 1.41521 1.71117 1.45443 1.29349 1.53738 1.06185 1.21488 0.96618 0.98282 0.80734 0.87985 1.23972 0.98445 0.90827 1.05333 1.24053 1.00440 0.92430 0.82736 1.88064 1.26296 1.73585 1.37748 1.23373 0.79540 1.03665 1.02872 1.21520 0.75645 0.77453 0.87637 1.93186 1.32191 1.94485 1.96582 1.93193 1.93867 1.33239 1.96537 1.93177 1.80870 1.85875 1.56112 1.23768 0.91548 0.97509 1.04110 1.22812 0.88466 1.00683 0.95088 1.20515 1.02371 0.93169 1.11317 1.24584 0.81833 1.13924 0.95532 1.86437 1.43996 1.53028 1.52045 0.94055 0.85164 0.72340 0.79945 1.21781 0.93464 0.99068 0.94160 1.21396 1.01058 0.91642 1.09114 0.91919 0.91572 0.86344 0.84135 0.84912 0.83578 0.80664 0.74093 0.85707 0.86551 0.90797 0.86134 0.94055 0.88870 0.85886 0.76723 0.87538 0.76628 1.23497 1.18933 0.82417 0.83572 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 113.37 1.11 1.11 16 2 O -0.33 -2.68 10.49 -92.32 -0.97 -3.65 16 3 C 0.12 1.14 6.69 22.55 0.15 1.30 16 4 C -0.17 -1.52 9.97 22.34 0.22 -1.30 16 5 C -0.06 -0.57 9.74 22.46 0.22 -0.35 16 6 C -0.07 -0.73 5.80 -20.03 -0.12 -0.85 16 7 C 0.12 1.10 6.73 42.53 0.29 1.39 16 8 N -0.29 -2.94 11.63 -48.16 -0.56 -3.50 16 9 N -0.36 -0.38 3.40 -351.92 -1.20 -1.57 16 10 C 0.11 -0.88 6.99 85.63 0.60 -0.29 16 11 C 0.50 -0.38 7.86 87.66 0.69 0.31 16 12 O -0.56 -6.39 15.32 -3.03 -0.05 -6.43 16 13 N -0.69 4.54 5.14 -440.05 -2.26 2.28 16 14 C 0.14 -0.57 4.29 45.52 0.20 -0.38 16 15 H 0.10 0.01 7.50 -2.39 -0.02 -0.01 16 16 C -0.15 1.14 6.66 31.12 0.21 1.35 16 17 C 0.05 -0.20 0.85 -10.18 -0.01 -0.21 16 18 O -0.34 1.90 9.09 -148.98 -1.35 0.54 16 19 C 0.00 -0.01 10.43 113.37 1.18 1.18 16 20 C 0.43 0.09 2.51 71.98 0.18 0.27 16 21 F -0.18 -0.09 15.24 44.97 0.69 0.59 16 22 F -0.19 -0.77 17.09 44.97 0.77 0.00 16 23 F -0.18 -0.26 15.82 44.97 0.71 0.45 16 24 C -0.13 0.47 7.15 31.21 0.22 0.70 16 25 C 0.07 -0.17 9.96 83.47 0.83 0.66 16 26 C -0.26 -0.71 5.34 -19.95 -0.11 -0.81 16 27 C -0.05 -0.01 2.00 71.24 0.14 0.13 16 28 O -0.55 -1.31 10.09 -148.98 -1.50 -2.82 16 29 Si 0.78 -3.48 30.81 68.60 2.11 -1.37 16 30 C -0.07 -0.60 8.94 22.46 0.20 -0.40 16 31 C -0.21 -1.63 9.02 22.33 0.20 -1.43 16 32 H 0.06 -0.07 7.66 -2.38 -0.02 -0.09 16 33 H 0.07 -0.11 7.65 -2.39 -0.02 -0.13 16 34 H 0.12 -0.45 8.14 -2.39 -0.02 -0.47 16 35 H 0.14 0.88 8.06 -2.92 -0.02 0.86 16 36 H 0.13 1.09 8.06 -2.91 -0.02 1.07 16 37 H 0.15 -1.93 8.14 -2.39 -0.02 -1.94 16 38 H 0.18 -3.09 8.07 -2.38 -0.02 -3.11 16 39 H 0.42 -5.21 7.63 -92.71 -0.71 -5.92 16 40 H 0.12 -1.06 8.06 -2.39 -0.02 -1.08 16 41 H 0.12 -1.30 6.74 -2.39 -0.02 -1.31 16 42 H 0.07 -0.95 6.76 -2.39 -0.02 -0.97 16 43 H 0.12 -1.52 8.14 -2.39 -0.02 -1.54 16 44 H 0.04 -0.24 6.25 -2.39 -0.01 -0.25 16 45 H 0.09 -0.22 8.14 -2.39 -0.02 -0.23 16 46 H 0.12 -0.48 7.01 -2.39 -0.02 -0.50 16 47 H 0.22 -2.41 6.33 -2.91 -0.02 -2.42 16 48 H 0.11 0.16 7.84 -2.39 -0.02 0.14 16 49 H 0.38 -1.08 8.70 -74.06 -0.64 -1.72 16 50 H -0.31 -1.26 7.11 99.48 0.71 -0.55 16 51 H -0.26 0.99 6.99 99.48 0.70 1.68 16 52 H 0.16 1.28 4.51 -2.91 -0.01 1.27 16 53 H 0.15 0.47 6.28 -2.91 -0.02 0.45 16 Total: 0.00 -32.40 444.67 2.50 -29.90 By element: Atomic # 1 Polarization: -16.49 SS G_CDS: -0.30 Total: -16.79 kcal Atomic # 6 Polarization: -4.05 SS G_CDS: 6.41 Total: 2.37 kcal Atomic # 7 Polarization: 1.23 SS G_CDS: -4.02 Total: -2.79 kcal Atomic # 8 Polarization: -8.48 SS G_CDS: -3.87 Total: -12.35 kcal Atomic # 9 Polarization: -1.13 SS G_CDS: 2.17 Total: 1.04 kcal Atomic # 14 Polarization: -3.48 SS G_CDS: 2.11 Total: -1.37 kcal Total: -32.40 2.50 -29.90 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_12622750.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -110.561 kcal (2) G-P(sol) polarization free energy of solvation -32.397 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -142.958 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.501 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.897 kcal (6) G-S(sol) free energy of system = (1) + (5) -140.458 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.79 seconds