Wall clock time and date at job start Sun Mar 7 2021 08:16:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42900 * 114.00482 * 2 1 4 4 C 1.52989 * 112.90829 * 293.95726 * 3 2 1 5 5 F 1.39899 * 109.47481 * 195.83217 * 4 3 2 6 6 F 1.39907 * 109.47017 * 315.82925 * 4 3 2 7 7 F 1.39903 * 109.47645 * 75.83129 * 4 3 2 8 8 C 1.53785 * 113.61629 * 162.70033 * 3 2 1 9 9 C 1.53779 * 87.08007 * 270.88572 * 8 3 2 10 10 H 1.09003 * 113.69286 * 220.00632 * 9 8 3 11 11 N 1.46502 * 113.61602 * 89.11937 * 9 8 3 12 12 C 1.34775 * 120.00195 * 107.49777 * 11 9 8 13 13 O 1.21273 * 120.00055 * 0.02562 * 12 11 9 14 14 C 1.50703 * 119.99770 * 180.02562 * 12 11 9 15 15 C 1.52999 * 109.47092 * 180.02562 * 14 12 11 16 16 O 1.42895 * 109.47546 * 180.02562 * 15 14 12 17 17 C 1.35897 * 117.00486 * 180.02562 * 16 15 14 18 18 C 1.38716 * 120.05764 * 179.97438 * 17 16 15 19 19 C 1.38168 * 119.94163 * 180.02562 * 18 17 16 20 20 C 1.50702 * 119.96993 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47086 * 65.00113 * 20 19 18 22 22 Si 1.86299 * 109.47064 * 185.00108 * 20 19 18 23 23 C 1.38239 * 120.05712 * 0.02562 * 19 18 17 24 24 C 1.38290 * 120.11298 * 0.02562 * 23 19 18 25 25 C 1.38117 * 120.05501 * 359.97438 * 24 23 19 26 26 C 1.53782 * 87.08628 * 334.56791 * 9 8 3 27 27 H 1.08999 * 109.47223 * 304.85589 * 1 2 3 28 28 H 1.09006 * 109.46711 * 64.85029 * 1 2 3 29 29 H 1.09004 * 109.47388 * 184.84841 * 1 2 3 30 30 H 1.08999 * 113.61093 * 156.33946 * 8 3 2 31 31 H 1.08994 * 113.61152 * 25.43432 * 8 3 2 32 32 H 0.97004 * 119.99675 * 287.50362 * 11 9 8 33 33 H 1.08995 * 109.47610 * 59.99919 * 14 12 11 34 34 H 1.09002 * 109.47119 * 299.99807 * 14 12 11 35 35 H 1.09004 * 109.46978 * 59.99648 * 15 14 12 36 36 H 1.09007 * 109.47255 * 299.99939 * 15 14 12 37 37 H 1.07994 * 120.02737 * 359.75293 * 18 17 16 38 38 H 1.09006 * 109.46846 * 305.00089 * 20 19 18 39 39 H 0.96694 * 113.99803 * 60.00264 * 21 20 19 40 40 H 1.48497 * 110.00016 * 179.97438 * 22 20 19 41 41 H 1.48490 * 109.99973 * 301.31962 * 22 20 19 42 42 H 1.08001 * 119.94654 * 179.97438 * 23 19 18 43 43 H 1.08001 * 119.97060 * 179.97438 * 24 23 19 44 44 H 1.08000 * 120.02830 * 180.02562 * 25 24 23 45 45 H 1.08998 * 113.61253 * 139.97987 * 26 9 8 46 46 H 1.09002 * 113.61334 * 270.80105 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7298 2.0822 -1.2878 5 9 2.6034 3.1714 -1.3752 6 9 1.9205 1.2420 -2.3901 7 9 0.4091 2.5436 -1.2760 8 6 3.4899 1.3209 0.4190 9 6 2.9968 1.4823 1.8666 10 1 3.5927 2.1782 2.4573 11 7 2.7634 0.2090 2.5526 12 6 3.6114 -0.2030 3.5157 13 8 4.5674 0.4806 3.8149 14 6 3.3715 -1.5131 4.2208 15 6 4.4705 -1.7413 5.2605 16 8 4.2435 -2.9838 5.9288 17 6 5.1357 -3.3394 6.8902 18 6 4.9758 -4.5326 7.5794 19 6 5.8840 -4.8915 8.5568 20 6 5.7112 -6.1879 9.3055 21 8 5.8627 -7.2840 8.4014 22 14 6.9987 -6.3067 10.6468 23 6 6.9511 -4.0625 8.8484 24 6 7.1122 -2.8719 8.1635 25 6 6.2070 -2.5086 7.1856 26 6 1.7210 2.1085 1.2792 27 1 -0.3633 0.5873 0.8433 28 1 -0.3633 0.4368 -0.9303 29 1 -0.3634 -1.0240 0.0869 30 1 4.0401 2.1848 0.0463 31 1 4.0053 0.3782 0.2359 32 1 1.9985 -0.3376 2.3134 33 1 3.3846 -2.3249 3.4936 34 1 2.4017 -1.4860 4.7178 35 1 4.4570 -0.9294 5.9877 36 1 5.4406 -1.7682 4.7640 37 1 4.1396 -5.1783 7.3553 38 1 4.7173 -6.2198 9.7520 39 1 6.7256 -7.3186 7.9664 40 1 6.8386 -7.5806 11.3930 41 1 8.3581 -6.2322 10.0539 42 1 7.6597 -4.3446 9.6131 43 1 7.9464 -2.2258 8.3935 44 1 6.3335 -1.5789 6.6507 45 1 0.8086 1.8015 1.7906 46 1 1.7872 3.1880 1.1430 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17312452_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:16:26 Heat of formation + Delta-G solvation = -234.839829 kcal Electronic energy + Delta-G solvation = -34218.299373 eV Core-core repulsion = 28854.659593 eV Total energy + Delta-G solvation = -5363.639780 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.08 seconds Orbital eigenvalues (eV) -51.23862 -48.78551 -48.67164 -41.97973 -41.27406 -40.27819 -39.09926 -37.46784 -37.29549 -34.50590 -33.22468 -32.44945 -30.82817 -29.19601 -28.28696 -27.03927 -27.01395 -25.66996 -23.92156 -23.64659 -22.22395 -21.57929 -21.19460 -19.84941 -19.53171 -19.38505 -19.24761 -18.21615 -17.73761 -17.52496 -17.51248 -17.12270 -17.02099 -16.80492 -16.58020 -16.22828 -15.99199 -15.92409 -15.62474 -15.56599 -15.49360 -15.16268 -14.95567 -14.93152 -14.86371 -14.76663 -14.52989 -14.38407 -14.22525 -14.05796 -13.76976 -13.58659 -13.45249 -13.20656 -12.99608 -12.87040 -12.81989 -12.49282 -12.38634 -11.91146 -11.89690 -11.82986 -11.52799 -11.16894 -11.08349 -10.61678 -10.33809 -9.90704 -9.21849 -4.93937 0.24482 0.44177 1.27782 1.39280 1.46377 1.55012 1.61659 1.88184 1.97373 2.36175 2.44398 2.52936 2.70145 2.71641 3.18482 3.27885 3.39270 3.40562 3.45923 3.64622 3.78638 3.80109 3.86562 3.89774 3.98971 4.06901 4.07459 4.20171 4.21797 4.22977 4.26523 4.33247 4.36112 4.48458 4.53383 4.54921 4.55724 4.59659 4.61461 4.72341 5.00387 5.20539 5.29585 5.41057 5.47546 5.49330 5.71296 6.23823 6.39189 6.41370 6.98313 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.333 6.333 3 C 0.040 3.960 4 C 0.438 3.562 5 F -0.174 7.174 6 F -0.174 7.174 7 F -0.181 7.181 8 C -0.131 4.131 9 C 0.135 3.865 10 H 0.122 0.878 11 N -0.708 5.708 12 C 0.526 3.474 13 O -0.535 6.535 14 C -0.141 4.141 15 C 0.075 3.925 16 O -0.316 6.316 17 C 0.132 3.868 18 C -0.125 4.125 19 C -0.080 4.080 20 C -0.076 4.076 21 O -0.528 6.528 22 Si 0.690 3.310 23 C -0.156 4.156 24 C -0.073 4.073 25 C -0.202 4.202 26 C -0.161 4.161 27 H 0.056 0.944 28 H 0.054 0.946 29 H 0.104 0.896 30 H 0.123 0.877 31 H 0.100 0.900 32 H 0.408 0.592 33 H 0.109 0.891 34 H 0.108 0.892 35 H 0.073 0.927 36 H 0.073 0.927 37 H 0.133 0.867 38 H 0.120 0.880 39 H 0.376 0.624 40 H -0.257 1.257 41 H -0.260 1.260 42 H 0.129 0.871 43 H 0.130 0.870 44 H 0.133 0.867 45 H 0.098 0.902 46 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.377 2.059 1.759 3.603 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.251 6.251 3 C -0.003 4.003 4 C 0.383 3.617 5 F -0.155 7.155 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.170 4.170 9 C 0.029 3.971 10 H 0.140 0.860 11 N -0.361 5.361 12 C 0.312 3.688 13 O -0.411 6.411 14 C -0.181 4.181 15 C -0.001 4.001 16 O -0.230 6.230 17 C 0.087 3.913 18 C -0.144 4.144 19 C -0.081 4.081 20 C -0.186 4.186 21 O -0.335 6.335 22 Si 0.592 3.408 23 C -0.174 4.174 24 C -0.091 4.091 25 C -0.220 4.220 26 C -0.199 4.199 27 H 0.074 0.926 28 H 0.073 0.927 29 H 0.122 0.878 30 H 0.141 0.859 31 H 0.118 0.882 32 H 0.244 0.756 33 H 0.127 0.873 34 H 0.127 0.873 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.151 0.849 38 H 0.137 0.863 39 H 0.224 0.776 40 H -0.182 1.182 41 H -0.185 1.185 42 H 0.146 0.854 43 H 0.148 0.852 44 H 0.150 0.850 45 H 0.117 0.883 46 H 0.138 0.862 Dipole moment (debyes) X Y Z Total from point charges -1.700 1.713 2.391 3.397 hybrid contribution -0.398 -0.143 -1.825 1.873 sum -2.098 1.570 0.566 2.681 Atomic orbital electron populations 1.23184 0.79358 1.04463 1.01772 1.88083 1.21172 1.21923 1.93921 1.24029 0.99953 0.86278 0.90020 1.21118 0.74336 0.78739 0.87492 1.93188 1.69350 1.56386 1.96602 1.93228 1.94751 1.70876 1.56628 1.93198 1.36541 1.89689 1.96848 1.23722 0.91136 1.06157 0.95941 1.21596 0.96375 0.86515 0.92616 0.85999 1.45634 1.30086 1.22241 1.38115 1.20313 0.82174 0.87120 0.79155 1.90758 1.29206 1.56496 1.64643 1.21459 1.01473 0.96088 0.99098 1.22413 0.98672 0.84588 0.94432 1.85972 1.48884 1.39243 1.48900 1.18955 0.89135 0.94016 0.89197 1.20249 1.01471 0.95300 0.97356 1.20058 0.94795 0.96520 0.96708 1.25076 1.11148 0.83997 0.98347 1.86609 1.39412 1.47588 1.59856 0.94839 0.77011 0.86720 0.82255 1.20978 0.98771 0.95887 1.01764 1.20928 0.98090 0.95869 0.94240 1.21397 0.96757 1.01452 1.02415 1.24003 1.00330 1.01769 0.93823 0.92559 0.92702 0.87781 0.85864 0.88152 0.75586 0.87264 0.87345 0.90830 0.90904 0.84860 0.86254 0.77603 1.18248 1.18525 0.85403 0.85172 0.84964 0.88327 0.86223 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 10.30 101.05 1.04 1.02 16 2 O -0.33 0.52 9.06 -35.23 -0.32 0.20 16 3 C 0.04 -0.07 0.84 -89.81 -0.08 -0.15 16 4 C 0.44 0.06 2.53 37.15 0.09 0.16 16 5 F -0.17 -0.06 15.81 2.25 0.04 -0.03 16 6 F -0.17 -0.36 17.11 2.25 0.04 -0.32 16 7 F -0.18 -0.08 15.40 2.25 0.03 -0.05 16 8 C -0.13 0.27 7.13 -25.92 -0.18 0.08 16 9 C 0.13 -0.32 4.32 -67.12 -0.29 -0.61 16 10 H 0.12 -0.19 7.46 -51.93 -0.39 -0.58 16 11 N -0.71 1.76 5.15 -53.02 -0.27 1.48 16 12 C 0.53 -0.30 7.83 -10.98 -0.09 -0.39 16 13 O -0.53 -1.65 15.58 5.56 0.09 -1.56 16 14 C -0.14 0.32 6.07 -27.88 -0.17 0.15 16 15 C 0.07 -0.01 4.03 37.16 0.15 0.14 16 16 O -0.32 -0.49 10.14 -19.42 -0.20 -0.69 16 17 C 0.13 0.26 6.69 -39.21 -0.26 0.00 16 18 C -0.13 -0.23 9.63 -39.43 -0.38 -0.61 16 19 C -0.08 -0.06 5.35 -104.65 -0.56 -0.62 16 20 C -0.08 -0.01 2.80 36.01 0.10 0.09 16 21 O -0.53 -0.85 12.83 -35.23 -0.45 -1.31 16 22 Si 0.69 -0.55 29.88 -169.99 -5.08 -5.63 16 23 C -0.16 -0.02 8.67 -39.56 -0.34 -0.37 16 24 C -0.07 -0.02 10.04 -39.61 -0.40 -0.41 16 25 C -0.20 -0.21 9.04 -39.43 -0.36 -0.56 16 26 C -0.16 0.57 6.66 -25.91 -0.17 0.40 16 27 H 0.06 -0.26 6.55 -51.93 -0.34 -0.60 16 28 H 0.05 -0.11 6.69 -51.93 -0.35 -0.46 16 29 H 0.10 -0.48 8.14 -51.93 -0.42 -0.90 16 30 H 0.12 -0.35 7.02 -51.93 -0.36 -0.71 16 31 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 32 H 0.41 -1.67 7.59 -40.82 -0.31 -1.98 16 33 H 0.11 -0.36 8.14 -51.93 -0.42 -0.79 16 34 H 0.11 -0.41 8.14 -51.93 -0.42 -0.83 16 35 H 0.07 0.00 7.62 -51.93 -0.40 -0.40 16 36 H 0.07 0.02 7.62 -51.92 -0.40 -0.38 16 37 H 0.13 0.23 8.06 -52.49 -0.42 -0.20 16 38 H 0.12 -0.08 7.96 -51.93 -0.41 -0.49 16 39 H 0.38 -0.44 8.70 45.56 0.40 -0.05 16 40 H -0.26 -0.63 7.11 56.52 0.40 -0.23 16 41 H -0.26 -0.28 7.01 56.52 0.40 0.11 16 42 H 0.13 -0.19 4.84 -52.49 -0.25 -0.45 16 43 H 0.13 -0.24 8.06 -52.49 -0.42 -0.66 16 44 H 0.13 0.00 6.30 -52.49 -0.33 -0.33 16 45 H 0.10 -0.44 6.67 -51.93 -0.35 -0.79 16 46 H 0.12 -0.51 8.05 -51.93 -0.42 -0.93 16 LS Contribution 388.73 15.07 5.86 5.86 Total: 0.00 -8.10 388.73 -7.80 -15.91 By element: Atomic # 1 Polarization: -6.53 SS G_CDS: -5.65 Total: -12.18 kcal Atomic # 6 Polarization: 0.20 SS G_CDS: -1.89 Total: -1.69 kcal Atomic # 7 Polarization: 1.76 SS G_CDS: -0.27 Total: 1.48 kcal Atomic # 8 Polarization: -2.48 SS G_CDS: -0.88 Total: -3.36 kcal Atomic # 9 Polarization: -0.50 SS G_CDS: 0.11 Total: -0.39 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.08 Total: -5.63 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -8.10 -7.80 -15.91 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -218.930 kcal (2) G-P(sol) polarization free energy of solvation -8.105 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -227.035 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.805 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.909 kcal (6) G-S(sol) free energy of system = (1) + (5) -234.840 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.08 seconds