Wall clock time and date at job start Sun Mar 7 2021 08:16:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42900 * 114.00482 * 2 1 4 4 C 1.52989 * 112.90829 * 293.95726 * 3 2 1 5 5 F 1.39899 * 109.47481 * 195.83217 * 4 3 2 6 6 F 1.39907 * 109.47017 * 315.82925 * 4 3 2 7 7 F 1.39903 * 109.47645 * 75.83129 * 4 3 2 8 8 C 1.53785 * 113.61629 * 162.70033 * 3 2 1 9 9 C 1.53779 * 87.08007 * 270.88572 * 8 3 2 10 10 H 1.09003 * 113.69286 * 220.00632 * 9 8 3 11 11 N 1.46502 * 113.61602 * 89.11937 * 9 8 3 12 12 C 1.34775 * 120.00195 * 107.49777 * 11 9 8 13 13 O 1.21273 * 120.00055 * 0.02562 * 12 11 9 14 14 C 1.50703 * 119.99770 * 180.02562 * 12 11 9 15 15 C 1.52999 * 109.47092 * 180.02562 * 14 12 11 16 16 O 1.42895 * 109.47546 * 180.02562 * 15 14 12 17 17 C 1.35897 * 117.00486 * 180.02562 * 16 15 14 18 18 C 1.38716 * 120.05764 * 179.97438 * 17 16 15 19 19 C 1.38168 * 119.94163 * 180.02562 * 18 17 16 20 20 C 1.50702 * 119.96993 * 180.02562 * 19 18 17 21 21 O 1.42901 * 109.47086 * 65.00113 * 20 19 18 22 22 Si 1.86299 * 109.47064 * 185.00108 * 20 19 18 23 23 C 1.38239 * 120.05712 * 0.02562 * 19 18 17 24 24 C 1.38290 * 120.11298 * 0.02562 * 23 19 18 25 25 C 1.38117 * 120.05501 * 359.97438 * 24 23 19 26 26 C 1.53782 * 87.08628 * 334.56791 * 9 8 3 27 27 H 1.08999 * 109.47223 * 304.85589 * 1 2 3 28 28 H 1.09006 * 109.46711 * 64.85029 * 1 2 3 29 29 H 1.09004 * 109.47388 * 184.84841 * 1 2 3 30 30 H 1.08999 * 113.61093 * 156.33946 * 8 3 2 31 31 H 1.08994 * 113.61152 * 25.43432 * 8 3 2 32 32 H 0.97004 * 119.99675 * 287.50362 * 11 9 8 33 33 H 1.08995 * 109.47610 * 59.99919 * 14 12 11 34 34 H 1.09002 * 109.47119 * 299.99807 * 14 12 11 35 35 H 1.09004 * 109.46978 * 59.99648 * 15 14 12 36 36 H 1.09007 * 109.47255 * 299.99939 * 15 14 12 37 37 H 1.07994 * 120.02737 * 359.75293 * 18 17 16 38 38 H 1.09006 * 109.46846 * 305.00089 * 20 19 18 39 39 H 0.96694 * 113.99803 * 60.00264 * 21 20 19 40 40 H 1.48497 * 110.00016 * 179.97438 * 22 20 19 41 41 H 1.48490 * 109.99973 * 301.31962 * 22 20 19 42 42 H 1.08001 * 119.94654 * 179.97438 * 23 19 18 43 43 H 1.08001 * 119.97060 * 179.97438 * 24 23 19 44 44 H 1.08000 * 120.02830 * 180.02562 * 25 24 23 45 45 H 1.08998 * 113.61253 * 139.97987 * 26 9 8 46 46 H 1.09002 * 113.61334 * 270.80105 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7298 2.0822 -1.2878 5 9 2.6034 3.1714 -1.3752 6 9 1.9205 1.2420 -2.3901 7 9 0.4091 2.5436 -1.2760 8 6 3.4899 1.3209 0.4190 9 6 2.9968 1.4823 1.8666 10 1 3.5927 2.1782 2.4573 11 7 2.7634 0.2090 2.5526 12 6 3.6114 -0.2030 3.5157 13 8 4.5674 0.4806 3.8149 14 6 3.3715 -1.5131 4.2208 15 6 4.4705 -1.7413 5.2605 16 8 4.2435 -2.9838 5.9288 17 6 5.1357 -3.3394 6.8902 18 6 4.9758 -4.5326 7.5794 19 6 5.8840 -4.8915 8.5568 20 6 5.7112 -6.1879 9.3055 21 8 5.8627 -7.2840 8.4014 22 14 6.9987 -6.3067 10.6468 23 6 6.9511 -4.0625 8.8484 24 6 7.1122 -2.8719 8.1635 25 6 6.2070 -2.5086 7.1856 26 6 1.7210 2.1085 1.2792 27 1 -0.3633 0.5873 0.8433 28 1 -0.3633 0.4368 -0.9303 29 1 -0.3634 -1.0240 0.0869 30 1 4.0401 2.1848 0.0463 31 1 4.0053 0.3782 0.2359 32 1 1.9985 -0.3376 2.3134 33 1 3.3846 -2.3249 3.4936 34 1 2.4017 -1.4860 4.7178 35 1 4.4570 -0.9294 5.9877 36 1 5.4406 -1.7682 4.7640 37 1 4.1396 -5.1783 7.3553 38 1 4.7173 -6.2198 9.7520 39 1 6.7256 -7.3186 7.9664 40 1 6.8386 -7.5806 11.3930 41 1 8.3581 -6.2322 10.0539 42 1 7.6597 -4.3446 9.6131 43 1 7.9464 -2.2258 8.3935 44 1 6.3335 -1.5789 6.6507 45 1 0.8086 1.8015 1.7906 46 1 1.7872 3.1880 1.1430 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17312452_4549614.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:16:25 Heat of formation + Delta-G solvation = -233.975810 kcal Electronic energy + Delta-G solvation = -34218.261906 eV Core-core repulsion = 28854.659593 eV Total energy + Delta-G solvation = -5363.602313 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.138 amu Computer time = 1.27 seconds Orbital eigenvalues (eV) -51.26561 -48.80011 -48.73885 -41.84840 -41.29040 -40.22600 -39.13140 -37.40957 -37.24560 -34.43220 -33.14869 -32.48446 -30.84171 -29.07417 -28.09318 -27.04701 -26.79995 -25.63592 -23.83930 -23.67265 -22.20688 -21.51304 -21.07320 -19.80811 -19.55374 -19.38606 -19.21595 -18.19917 -17.74343 -17.49094 -17.35664 -17.12722 -16.89555 -16.81636 -16.40311 -16.23725 -15.97242 -15.77575 -15.65146 -15.58703 -15.52463 -15.18822 -14.97828 -14.93397 -14.90897 -14.74227 -14.50389 -14.33283 -14.13592 -14.10151 -13.67087 -13.43887 -13.22043 -13.19709 -12.94765 -12.86255 -12.63708 -12.39417 -12.30345 -11.95844 -11.80801 -11.72984 -11.56011 -11.12901 -10.96373 -10.65121 -10.22653 -9.95050 -9.27128 -4.89692 0.20080 0.39572 1.30062 1.46155 1.51352 1.62131 1.64690 1.96364 2.06204 2.43807 2.54766 2.59968 2.66006 2.83602 3.28138 3.39595 3.42059 3.51148 3.56343 3.65138 3.84418 3.90168 3.95655 4.10060 4.12987 4.23571 4.27152 4.28673 4.32357 4.39378 4.42489 4.44435 4.55143 4.61853 4.64348 4.67686 4.72856 4.74686 4.78154 4.81716 4.98417 5.26235 5.36384 5.38291 5.44404 5.70092 5.70708 6.33059 6.41454 6.47474 7.10118 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.002 3.998 2 O -0.343 6.343 3 C 0.041 3.959 4 C 0.433 3.567 5 F -0.177 7.177 6 F -0.188 7.188 7 F -0.184 7.184 8 C -0.132 4.132 9 C 0.133 3.867 10 H 0.115 0.885 11 N -0.697 5.697 12 C 0.527 3.473 13 O -0.576 6.576 14 C -0.134 4.134 15 C 0.074 3.926 16 O -0.325 6.325 17 C 0.117 3.883 18 C -0.141 4.141 19 C -0.081 4.081 20 C -0.087 4.087 21 O -0.548 6.548 22 Si 0.776 3.224 23 C -0.159 4.159 24 C -0.076 4.076 25 C -0.210 4.210 26 C -0.148 4.148 27 H 0.073 0.927 28 H 0.041 0.959 29 H 0.118 0.882 30 H 0.128 0.872 31 H 0.091 0.909 32 H 0.418 0.582 33 H 0.123 0.877 34 H 0.128 0.872 35 H 0.069 0.931 36 H 0.064 0.936 37 H 0.128 0.872 38 H 0.125 0.875 39 H 0.386 0.614 40 H -0.303 1.303 41 H -0.281 1.281 42 H 0.146 0.854 43 H 0.152 0.848 44 H 0.138 0.862 45 H 0.113 0.887 46 H 0.129 0.871 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.767 2.373 2.368 4.347 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.093 4.093 2 O -0.261 6.261 3 C -0.001 4.001 4 C 0.378 3.622 5 F -0.158 7.158 6 F -0.170 7.170 7 F -0.165 7.165 8 C -0.171 4.171 9 C 0.027 3.973 10 H 0.133 0.867 11 N -0.349 5.349 12 C 0.314 3.686 13 O -0.456 6.456 14 C -0.173 4.173 15 C -0.001 4.001 16 O -0.239 6.239 17 C 0.072 3.928 18 C -0.160 4.160 19 C -0.082 4.082 20 C -0.195 4.195 21 O -0.356 6.356 22 Si 0.681 3.319 23 C -0.176 4.176 24 C -0.093 4.093 25 C -0.228 4.228 26 C -0.186 4.186 27 H 0.092 0.908 28 H 0.060 0.940 29 H 0.136 0.864 30 H 0.146 0.854 31 H 0.109 0.891 32 H 0.256 0.744 33 H 0.141 0.859 34 H 0.146 0.854 35 H 0.087 0.913 36 H 0.082 0.918 37 H 0.146 0.854 38 H 0.143 0.857 39 H 0.235 0.765 40 H -0.231 1.231 41 H -0.207 1.207 42 H 0.163 0.837 43 H 0.170 0.830 44 H 0.156 0.844 45 H 0.132 0.868 46 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -2.130 2.039 2.965 4.181 hybrid contribution -0.291 -0.267 -2.061 2.098 sum -2.421 1.772 0.904 3.133 Atomic orbital electron populations 1.23339 0.78495 1.05664 1.01805 1.88075 1.22151 1.21956 1.93872 1.24082 1.00104 0.86436 0.89528 1.21498 0.74159 0.78714 0.87822 1.93177 1.69431 1.56581 1.96642 1.93193 1.94836 1.71331 1.57616 1.93189 1.36722 1.89735 1.96858 1.23757 0.91158 1.05949 0.96220 1.21585 0.97075 0.86483 0.92175 0.86748 1.45565 1.29860 1.22227 1.37284 1.20563 0.81643 0.87231 0.79135 1.90742 1.30982 1.57791 1.66036 1.21433 1.01570 0.95496 0.98832 1.22449 0.99193 0.83867 0.94631 1.85950 1.49028 1.39917 1.48982 1.19140 0.89686 0.94392 0.89593 1.20337 1.01914 0.95527 0.98189 1.20146 0.94791 0.96783 0.96464 1.25342 1.12288 0.83401 0.98466 1.86575 1.40503 1.48148 1.60414 0.93865 0.74524 0.84037 0.79470 1.21204 0.98701 0.95710 1.02015 1.21242 0.98358 0.96138 0.93604 1.21557 0.96785 1.01643 1.02841 1.24003 1.00275 1.02063 0.92284 0.90850 0.94036 0.86368 0.85358 0.89085 0.74424 0.85903 0.85373 0.91264 0.91752 0.85421 0.85705 0.76461 1.23101 1.20711 0.83664 0.83015 0.84440 0.86826 0.85259 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.02 10.30 113.37 1.17 1.15 16 2 O -0.34 1.21 9.06 -148.98 -1.35 -0.14 16 3 C 0.04 -0.15 0.84 -10.27 -0.01 -0.16 16 4 C 0.43 0.24 2.53 71.98 0.18 0.43 16 5 F -0.18 -0.19 15.81 44.97 0.71 0.52 16 6 F -0.19 -0.93 17.11 44.97 0.77 -0.16 16 7 F -0.18 -0.17 15.40 44.97 0.69 0.52 16 8 C -0.13 0.50 7.13 31.12 0.22 0.72 16 9 C 0.13 -0.65 4.32 45.52 0.20 -0.46 16 10 H 0.11 -0.32 7.46 -2.39 -0.02 -0.34 16 11 N -0.70 3.76 5.15 -440.04 -2.27 1.49 16 12 C 0.53 -0.55 7.83 87.66 0.69 0.14 16 13 O -0.58 -4.09 15.58 -3.01 -0.05 -4.13 16 14 C -0.13 0.65 6.07 29.85 0.18 0.83 16 15 C 0.07 0.02 4.03 71.98 0.29 0.31 16 16 O -0.32 -1.25 10.14 -92.39 -0.94 -2.19 16 17 C 0.12 0.55 6.69 22.51 0.15 0.70 16 18 C -0.14 -0.63 9.63 22.37 0.22 -0.42 16 19 C -0.08 -0.14 5.35 -19.88 -0.11 -0.24 16 20 C -0.09 -0.03 2.80 71.24 0.20 0.17 16 21 O -0.55 -2.01 12.83 -148.98 -1.91 -3.92 16 22 Si 0.78 -1.48 29.88 68.60 2.05 0.57 16 23 C -0.16 0.06 8.67 22.28 0.19 0.25 16 24 C -0.08 0.01 10.04 22.25 0.22 0.23 16 25 C -0.21 -0.51 9.04 22.36 0.20 -0.30 16 26 C -0.15 1.17 6.66 31.12 0.21 1.38 16 27 H 0.07 -0.79 6.55 -2.39 -0.02 -0.80 16 28 H 0.04 -0.17 6.69 -2.38 -0.02 -0.19 16 29 H 0.12 -1.21 8.14 -2.39 -0.02 -1.23 16 30 H 0.13 -0.65 7.02 -2.39 -0.02 -0.67 16 31 H 0.09 -0.16 8.14 -2.39 -0.02 -0.18 16 32 H 0.42 -3.86 7.59 -92.71 -0.70 -4.57 16 33 H 0.12 -0.91 8.14 -2.39 -0.02 -0.93 16 34 H 0.13 -1.12 8.14 -2.39 -0.02 -1.14 16 35 H 0.07 0.06 7.62 -2.38 -0.02 0.05 16 36 H 0.06 0.11 7.62 -2.38 -0.02 0.09 16 37 H 0.13 0.61 8.06 -2.91 -0.02 0.59 16 38 H 0.13 -0.15 7.96 -2.38 -0.02 -0.17 16 39 H 0.39 -0.75 8.70 -74.06 -0.64 -1.40 16 40 H -0.30 -1.73 7.11 99.48 0.71 -1.03 16 41 H -0.28 -0.41 7.01 99.48 0.70 0.29 16 42 H 0.15 -0.64 4.84 -2.91 -0.01 -0.65 16 43 H 0.15 -0.76 8.06 -2.91 -0.02 -0.78 16 44 H 0.14 0.09 6.30 -2.91 -0.02 0.08 16 45 H 0.11 -1.22 6.67 -2.39 -0.02 -1.24 16 46 H 0.13 -1.23 8.05 -2.39 -0.02 -1.25 16 Total: 0.00 -19.82 388.73 1.65 -18.16 By element: Atomic # 1 Polarization: -15.21 SS G_CDS: -0.26 Total: -15.46 kcal Atomic # 6 Polarization: 0.54 SS G_CDS: 4.20 Total: 4.74 kcal Atomic # 7 Polarization: 3.76 SS G_CDS: -2.27 Total: 1.49 kcal Atomic # 8 Polarization: -6.14 SS G_CDS: -4.25 Total: -10.38 kcal Atomic # 9 Polarization: -1.29 SS G_CDS: 2.17 Total: 0.89 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.05 Total: 0.57 kcal Total: -19.82 1.65 -18.16 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_4549614.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -215.813 kcal (2) G-P(sol) polarization free energy of solvation -19.817 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -235.631 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.655 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.163 kcal (6) G-S(sol) free energy of system = (1) + (5) -233.976 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.27 seconds