Wall clock time and date at job start Sun Mar 7 2021 08:16:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.42901 * 113.99650 * 2 1 4 4 C 1.52999 * 112.85245 * 294.11538 * 3 2 1 5 5 F 1.39901 * 109.47107 * 195.88169 * 4 3 2 6 6 F 1.39902 * 109.46506 * 315.88287 * 4 3 2 7 7 F 1.39896 * 109.46954 * 75.88261 * 4 3 2 8 8 C 1.53781 * 113.61359 * 162.80592 * 3 2 1 9 9 C 1.53784 * 87.08413 * 270.88586 * 8 3 2 10 10 H 1.08992 * 113.69147 * 220.00770 * 9 8 3 11 11 N 1.46507 * 113.61370 * 89.11277 * 9 8 3 12 12 C 1.34774 * 119.99730 * 107.50929 * 11 9 8 13 13 O 1.21692 * 119.99971 * 359.97438 * 12 11 9 14 14 C 1.46658 * 119.99845 * 180.02562 * 12 11 9 15 15 C 1.36546 * 125.98425 * 179.97438 * 14 12 11 16 16 C 1.50693 * 126.65093 * 359.97438 * 15 14 12 17 17 C 1.40369 * 106.70311 * 180.02562 * 15 14 12 18 18 C 1.35128 * 107.11816 * 359.97438 * 17 15 14 19 19 C 1.50696 * 125.61923 * 179.97438 * 18 17 15 20 20 O 1.42903 * 109.47368 * 89.99828 * 19 18 17 21 21 C 1.35898 * 116.99909 * 179.97438 * 20 19 18 22 22 C 1.38732 * 120.05132 * 180.02562 * 21 20 19 23 23 C 1.38150 * 119.94212 * 180.30149 * 22 21 20 24 24 C 1.38264 * 120.05085 * 359.46617 * 23 22 21 25 25 C 1.50702 * 119.93991 * 180.25459 * 24 23 22 26 26 O 1.42903 * 109.47329 * 245.25541 * 25 24 23 27 27 Si 1.86301 * 109.47148 * 5.25617 * 25 24 23 28 28 C 1.38262 * 120.11695 * 0.51592 * 24 23 22 29 29 C 1.38145 * 120.05214 * 359.75955 * 28 24 23 30 30 O 1.33934 * 108.76834 * 0.22952 * 18 17 15 31 31 C 1.53782 * 87.07848 * 334.56577 * 9 8 3 32 32 H 1.08993 * 109.47364 * 303.22335 * 1 2 3 33 33 H 1.09007 * 109.46985 * 63.22594 * 1 2 3 34 34 H 1.09002 * 109.46962 * 183.22064 * 1 2 3 35 35 H 1.08991 * 113.61731 * 156.33673 * 8 3 2 36 36 H 1.09007 * 113.61157 * 25.42860 * 8 3 2 37 37 H 0.96995 * 120.00147 * 287.50539 * 11 9 8 38 38 H 1.09007 * 109.47020 * 270.00130 * 16 15 14 39 39 H 1.09002 * 109.47157 * 29.99614 * 16 15 14 40 40 H 1.08998 * 109.47594 * 150.00177 * 16 15 14 41 41 H 1.07998 * 126.44039 * 179.97438 * 17 15 14 42 42 H 1.09007 * 109.46921 * 329.99917 * 19 18 17 43 43 H 1.09001 * 109.47225 * 210.00243 * 19 18 17 44 44 H 1.08005 * 120.03168 * 0.02562 * 22 21 20 45 45 H 1.07997 * 119.97176 * 179.69625 * 23 22 21 46 46 H 1.09001 * 109.47206 * 125.25768 * 25 24 23 47 47 H 0.96704 * 113.99776 * 60.00096 * 26 25 24 48 48 H 1.48502 * 109.99852 * 179.97438 * 27 25 24 49 49 H 1.48489 * 110.00151 * 301.31660 * 27 25 24 50 50 H 1.08000 * 119.97679 * 179.74714 * 28 24 23 51 51 H 1.08007 * 120.02612 * 179.97438 * 29 28 24 52 52 H 1.09004 * 113.61228 * 139.97932 * 31 9 8 53 53 H 1.08997 * 113.61617 * 270.79629 * 31 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7256 2.0826 -1.2869 5 9 2.5991 3.1716 -1.3769 6 9 1.9123 1.2424 -2.3898 7 9 0.4050 2.5442 -1.2704 8 6 3.4904 1.3208 0.4165 9 6 2.9999 1.4811 1.8652 10 1 3.5967 2.1765 2.4552 11 7 2.7677 0.2072 2.5505 12 6 3.6172 -0.2054 3.5119 13 8 4.5775 0.4800 3.8105 14 6 3.3851 -1.4809 4.1975 15 6 4.1636 -2.0147 5.1842 16 6 5.4138 -1.4104 5.7697 17 6 3.5744 -3.2361 5.5466 18 6 2.4757 -3.3920 4.7755 19 6 1.5312 -4.5654 4.8206 20 8 0.4905 -4.3032 5.7642 21 6 -0.4523 -5.2683 5.9268 22 6 -1.4916 -5.0798 6.8263 23 6 -2.4453 -6.0650 6.9944 24 6 -2.3708 -7.2335 6.2591 25 6 -3.4157 -8.3042 6.4403 26 8 -2.8087 -9.4734 6.9940 27 14 -4.7427 -7.6880 7.5936 28 6 -1.3362 -7.4237 5.3618 29 6 -0.3769 -6.4439 5.1942 30 8 2.3676 -2.3346 3.9606 31 6 1.7231 2.1076 1.2803 32 1 -0.3634 0.5630 0.8596 33 1 -0.3633 0.4630 -0.9176 34 1 -0.3633 -1.0261 0.0577 35 1 4.0401 2.1850 0.0436 36 1 4.0057 0.3782 0.2319 37 1 2.0025 -0.3392 2.3123 38 1 6.2809 -1.7488 5.2025 39 1 5.3492 -0.3234 5.7206 40 1 5.5155 -1.7218 6.8092 41 1 3.9319 -3.9223 6.3001 42 1 2.0770 -5.4599 5.1208 43 1 1.0960 -4.7196 3.8332 44 1 -1.5526 -4.1654 7.3978 45 1 -3.2518 -5.9207 7.6980 46 1 -3.8581 -8.5473 5.4742 47 1 -2.3940 -9.3307 7.8558 48 1 -5.7796 -8.7345 7.7801 49 1 -4.1474 -7.3231 8.9041 50 1 -1.2779 -8.3391 4.7915 51 1 0.4313 -6.5931 4.4934 52 1 0.8115 1.8002 1.7929 53 1 1.7889 3.1872 1.1448 There are 81 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 81 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17312452_4549632.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:16:37 Heat of formation + Delta-G solvation = -208.180939 kcal Electronic energy + Delta-G solvation = -43891.996562 eV Core-core repulsion = 37670.614566 eV Total energy + Delta-G solvation = -6221.381996 eV No. of doubly occupied orbitals = 81 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 442.153 amu Computer time = 2.24 seconds Orbital eigenvalues (eV) -51.26514 -48.79597 -48.73708 -43.94600 -41.79190 -41.28066 -40.08083 -39.25018 -37.34487 -37.30270 -35.40440 -34.37220 -33.11393 -32.08358 -31.53227 -29.43518 -28.83022 -28.21128 -27.88610 -26.82780 -26.22051 -24.54393 -23.92558 -22.93797 -22.58605 -22.22093 -21.15258 -20.85578 -19.88272 -19.55395 -19.48551 -19.32867 -19.05259 -18.34952 -17.68905 -17.46658 -17.35601 -17.13108 -16.88303 -16.52433 -16.38895 -16.19959 -16.08321 -15.83342 -15.79139 -15.63624 -15.56600 -15.54850 -15.22196 -15.18091 -14.98365 -14.90574 -14.82065 -14.71238 -14.37545 -14.27235 -14.20311 -14.11445 -13.91805 -13.76245 -13.68210 -13.50525 -13.44508 -13.27704 -13.25291 -12.81540 -12.68665 -12.33025 -12.24297 -12.22566 -12.04659 -11.76347 -11.57658 -11.37713 -10.99905 -10.81159 -10.57909 -10.40266 -10.02906 -9.73085 -9.23472 -4.91031 -0.27744 0.26687 0.34472 0.96083 1.32536 1.33726 1.50324 1.60113 1.82921 1.91390 1.97016 2.09945 2.36440 2.52818 2.58644 2.66085 2.81157 3.25327 3.28732 3.37106 3.46608 3.49733 3.63505 3.64887 3.74131 3.79178 3.94095 4.01927 4.07484 4.10105 4.23964 4.27971 4.28736 4.30578 4.37930 4.42929 4.43186 4.46173 4.54307 4.61007 4.61848 4.66158 4.66744 4.72363 4.74176 4.78070 4.97259 5.01356 5.06654 5.18852 5.19897 5.30306 5.36556 5.50644 5.65088 5.68289 5.69383 6.27092 6.28919 6.50782 6.86079 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.003 3.997 2 O -0.345 6.345 3 C 0.039 3.961 4 C 0.435 3.565 5 F -0.175 7.175 6 F -0.187 7.187 7 F -0.183 7.183 8 C -0.129 4.129 9 C 0.131 3.869 10 H 0.124 0.876 11 N -0.691 5.691 12 C 0.608 3.392 13 O -0.538 6.538 14 C -0.094 4.094 15 C -0.093 4.093 16 C -0.095 4.095 17 C -0.188 4.188 18 C 0.012 3.988 19 C 0.137 3.863 20 O -0.324 6.324 21 C 0.125 3.875 22 C -0.155 4.155 23 C -0.080 4.080 24 C -0.157 4.157 25 C -0.076 4.076 26 O -0.550 6.550 27 Si 0.760 3.240 28 C -0.059 4.059 29 C -0.208 4.208 30 O -0.160 6.160 31 C -0.149 4.149 32 H 0.070 0.930 33 H 0.046 0.954 34 H 0.115 0.885 35 H 0.136 0.864 36 H 0.090 0.910 37 H 0.415 0.585 38 H 0.080 0.920 39 H 0.073 0.927 40 H 0.086 0.914 41 H 0.182 0.818 42 H 0.126 0.874 43 H 0.101 0.899 44 H 0.141 0.859 45 H 0.147 0.853 46 H 0.124 0.876 47 H 0.385 0.615 48 H -0.306 1.306 49 H -0.282 1.282 50 H 0.135 0.865 51 H 0.151 0.849 52 H 0.109 0.891 53 H 0.136 0.864 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.467 -0.396 0.958 2.676 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 O -0.263 6.263 3 C -0.004 4.004 4 C 0.381 3.619 5 F -0.156 7.156 6 F -0.169 7.169 7 F -0.164 7.164 8 C -0.168 4.168 9 C 0.026 3.974 10 H 0.142 0.858 11 N -0.342 5.342 12 C 0.396 3.604 13 O -0.418 6.418 14 C -0.146 4.146 15 C -0.096 4.096 16 C -0.152 4.152 17 C -0.207 4.207 18 C -0.040 4.040 19 C 0.063 3.937 20 O -0.238 6.238 21 C 0.080 3.920 22 C -0.173 4.173 23 C -0.097 4.097 24 C -0.158 4.158 25 C -0.185 4.185 26 O -0.358 6.358 27 Si 0.667 3.333 28 C -0.077 4.077 29 C -0.226 4.226 30 O -0.056 6.056 31 C -0.186 4.186 32 H 0.089 0.911 33 H 0.064 0.936 34 H 0.133 0.867 35 H 0.154 0.846 36 H 0.109 0.891 37 H 0.253 0.747 38 H 0.099 0.901 39 H 0.091 0.909 40 H 0.105 0.895 41 H 0.199 0.801 42 H 0.143 0.857 43 H 0.119 0.881 44 H 0.158 0.842 45 H 0.164 0.836 46 H 0.142 0.858 47 H 0.235 0.765 48 H -0.235 1.235 49 H -0.209 1.209 50 H 0.153 0.847 51 H 0.169 0.831 52 H 0.128 0.872 53 H 0.154 0.846 Dipole moment (debyes) X Y Z Total from point charges -2.542 -0.181 1.180 2.808 hybrid contribution 0.351 -0.772 -0.204 0.872 sum -2.191 -0.952 0.976 2.581 Atomic orbital electron populations 1.23321 0.78538 1.05485 1.01877 1.88084 1.22156 1.22196 1.93895 1.24105 1.00151 0.86352 0.89755 1.21397 0.74223 0.78696 0.87619 1.93180 1.69365 1.56470 1.96613 1.93193 1.94885 1.71335 1.57470 1.93188 1.36710 1.89704 1.96832 1.23765 0.91135 1.06226 0.95649 1.21712 0.97613 0.85597 0.92513 0.85842 1.45526 1.29205 1.22629 1.36791 1.16537 0.82460 0.82377 0.79048 1.90862 1.30210 1.54920 1.65779 1.21821 0.93377 0.94499 1.04927 1.20969 0.98322 0.94936 0.95336 1.20463 0.92245 1.01329 1.01119 1.21883 0.96893 0.98667 1.03247 1.22362 0.98213 0.89768 0.93650 1.21198 0.86301 0.91647 0.94577 1.86103 1.35881 1.42100 1.59740 1.19112 0.89285 0.87967 0.95629 1.20585 0.94470 1.01605 1.00670 1.21023 0.97998 0.92404 0.98296 1.20240 0.99002 0.96556 0.99979 1.25101 0.99906 0.86795 1.06674 1.86573 1.75459 1.34011 1.39745 0.94132 0.76600 0.84314 0.78281 1.20987 0.92370 0.98362 0.96011 1.21513 1.03083 0.94146 1.03860 1.83970 1.43070 1.26845 1.51719 1.24024 0.99955 1.02378 0.92276 0.91149 0.93553 0.86691 0.84612 0.89129 0.74738 0.90128 0.90866 0.89531 0.80070 0.85673 0.88060 0.84155 0.83623 0.85786 0.76532 1.23476 1.20882 0.84675 0.83137 0.87224 0.84564 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.33 113.37 1.17 1.16 16 2 O -0.35 0.35 9.06 -148.98 -1.35 -1.00 16 3 C 0.04 -0.08 0.84 -10.27 -0.01 -0.09 16 4 C 0.44 0.51 2.52 71.98 0.18 0.69 16 5 F -0.17 -0.21 15.82 44.97 0.71 0.51 16 6 F -0.19 -1.01 17.10 44.97 0.77 -0.24 16 7 F -0.18 -0.27 15.35 44.97 0.69 0.42 16 8 C -0.13 0.34 7.13 31.12 0.22 0.56 16 9 C 0.13 -0.36 4.32 45.52 0.20 -0.16 16 10 H 0.12 -0.25 7.46 -2.39 -0.02 -0.27 16 11 N -0.69 0.03 5.15 -444.01 -2.29 -2.26 16 12 C 0.61 3.24 7.79 86.44 0.67 3.92 16 13 O -0.54 -5.41 14.34 -4.32 -0.06 -5.47 16 14 C -0.09 -0.47 7.13 24.07 0.17 -0.30 16 15 C -0.09 -0.35 6.20 -19.74 -0.12 -0.48 16 16 C -0.10 -0.20 9.82 71.23 0.70 0.50 16 17 C -0.19 -0.03 10.73 22.07 0.24 0.20 16 18 C 0.01 0.00 6.94 24.97 0.17 0.17 16 19 C 0.14 -0.65 5.27 71.23 0.38 -0.27 16 20 O -0.32 -0.07 10.12 -92.40 -0.94 -1.00 16 21 C 0.12 -0.07 6.69 22.50 0.15 0.08 16 22 C -0.15 0.13 9.99 22.37 0.22 0.36 16 23 C -0.08 0.19 8.66 22.25 0.19 0.39 16 24 C -0.16 0.29 5.35 -19.85 -0.11 0.19 16 25 C -0.08 0.16 2.80 71.24 0.20 0.36 16 26 O -0.55 -0.68 12.83 -148.98 -1.91 -2.59 16 27 Si 0.76 -2.18 29.89 68.60 2.05 -0.13 16 28 C -0.06 0.12 9.68 22.25 0.22 0.33 16 29 C -0.21 0.62 9.04 22.36 0.20 0.82 16 30 O -0.16 -0.47 10.40 -5.10 -0.05 -0.52 16 31 C -0.15 0.91 6.66 31.12 0.21 1.12 16 32 H 0.07 -0.56 6.59 -2.39 -0.02 -0.57 16 33 H 0.05 -0.13 6.58 -2.38 -0.02 -0.15 16 34 H 0.11 -0.86 8.14 -2.39 -0.02 -0.88 16 35 H 0.14 -0.68 7.03 -2.39 -0.02 -0.70 16 36 H 0.09 -0.02 8.14 -2.38 -0.02 -0.04 16 37 H 0.42 -0.78 7.35 -92.71 -0.68 -1.46 16 38 H 0.08 0.10 8.14 -2.38 -0.02 0.08 16 39 H 0.07 0.41 6.44 -2.39 -0.02 0.39 16 40 H 0.09 -0.13 8.14 -2.39 -0.02 -0.15 16 41 H 0.18 -0.87 8.06 -2.91 -0.02 -0.90 16 42 H 0.13 -1.21 7.66 -2.38 -0.02 -1.23 16 43 H 0.10 -0.78 7.66 -2.39 -0.02 -0.80 16 44 H 0.14 -0.35 8.06 -2.91 -0.02 -0.37 16 45 H 0.15 -0.83 4.83 -2.91 -0.01 -0.85 16 46 H 0.12 -0.46 7.96 -2.39 -0.02 -0.48 16 47 H 0.39 -1.59 8.70 -74.05 -0.64 -2.24 16 48 H -0.31 -1.65 7.11 99.48 0.71 -0.94 16 49 H -0.28 -0.20 7.00 99.48 0.70 0.50 16 50 H 0.14 -0.46 8.06 -2.91 -0.02 -0.48 16 51 H 0.15 -1.17 6.30 -2.91 -0.02 -1.19 16 52 H 0.11 -0.88 6.68 -2.38 -0.02 -0.89 16 53 H 0.14 -1.21 8.05 -2.39 -0.02 -1.23 16 Total: 0.00 -20.20 448.07 2.60 -17.59 By element: Atomic # 1 Polarization: -14.57 SS G_CDS: -0.27 Total: -14.85 kcal Atomic # 6 Polarization: 4.29 SS G_CDS: 5.25 Total: 9.54 kcal Atomic # 7 Polarization: 0.03 SS G_CDS: -2.29 Total: -2.26 kcal Atomic # 8 Polarization: -6.27 SS G_CDS: -4.31 Total: -10.58 kcal Atomic # 9 Polarization: -1.49 SS G_CDS: 2.17 Total: 0.68 kcal Atomic # 14 Polarization: -2.18 SS G_CDS: 2.05 Total: -0.13 kcal Total: -20.20 2.60 -17.59 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_4549632.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -190.587 kcal (2) G-P(sol) polarization free energy of solvation -20.196 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -210.784 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.603 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.594 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.181 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 2.25 seconds