Wall clock time and date at job start Sun Mar 7 2021 08:16:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.42904 * 114.00061 * 2 1 4 4 C 1.52999 * 112.90344 * 68.14526 * 3 2 1 5 5 F 1.39895 * 109.47248 * 284.67419 * 4 3 2 6 6 F 1.39901 * 109.47155 * 44.67984 * 4 3 2 7 7 F 1.39905 * 109.47067 * 164.67638 * 4 3 2 8 8 C 1.53772 * 113.61645 * 296.89636 * 3 2 1 9 9 C 1.53781 * 87.08176 * 270.88173 * 8 3 2 10 10 H 1.09002 * 113.61743 * 220.01665 * 9 8 3 11 11 N 1.46505 * 113.61406 * 89.11358 * 9 8 3 12 12 C 1.34782 * 119.99761 * 155.00265 * 11 9 8 13 13 O 1.21278 * 119.99988 * 359.97438 * 12 11 9 14 14 C 1.50703 * 119.99788 * 180.02562 * 12 11 9 15 15 O 1.42895 * 109.46817 * 179.97438 * 14 12 11 16 16 C 1.35899 * 116.99866 * 179.97438 * 15 14 12 17 17 C 1.38716 * 120.05687 * 180.02562 * 16 15 14 18 18 N 1.47996 * 120.02744 * 359.97438 * 17 16 15 19 19 O 1.21802 * 120.00205 * 180.02562 * 18 17 16 20 20 O 1.21799 * 120.00043 * 359.97438 * 18 17 16 21 21 C 1.38170 * 119.94326 * 179.97438 * 17 16 15 22 22 C 1.38241 * 120.05577 * 0.02562 * 21 17 16 23 23 C 1.50706 * 119.94277 * 179.97438 * 22 21 17 24 24 O 1.42897 * 109.46966 * 300.00271 * 23 22 21 25 25 Si 1.86299 * 109.46895 * 179.97438 * 23 22 21 26 26 C 1.38294 * 120.11372 * 359.97438 * 22 21 17 27 27 C 1.38118 * 120.05301 * 359.74217 * 26 22 21 28 28 C 1.53777 * 113.61683 * 199.39580 * 3 2 1 29 29 H 1.09000 * 109.46862 * 178.91599 * 1 2 3 30 30 H 1.08997 * 109.47140 * 298.92028 * 1 2 3 31 31 H 1.09003 * 109.47221 * 58.91750 * 1 2 3 32 32 H 1.08998 * 113.61746 * 156.33424 * 8 3 2 33 33 H 1.09002 * 113.61465 * 25.42522 * 8 3 2 34 34 H 0.96998 * 120.00350 * 335.00481 * 11 9 8 35 35 H 1.08997 * 109.47115 * 300.00070 * 14 12 11 36 36 H 1.09004 * 109.47107 * 60.00276 * 14 12 11 37 37 H 1.07995 * 119.97119 * 179.97438 * 21 17 16 38 38 H 1.08994 * 109.46811 * 60.00465 * 23 22 21 39 39 H 0.96703 * 113.99237 * 179.97438 * 24 23 22 40 40 H 1.48500 * 110.00424 * 298.68666 * 25 23 22 41 41 H 1.48504 * 109.99969 * 60.00549 * 25 23 22 42 42 H 1.07996 * 119.97393 * 180.02562 * 26 22 21 43 43 H 1.08004 * 120.03061 * 180.27339 * 27 26 22 44 44 H 1.09004 * 113.61340 * 334.56818 * 28 3 2 45 45 H 1.08999 * 113.69581 * 203.67755 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7732 2.0628 1.3081 5 9 0.4497 2.5139 1.3525 6 9 2.0117 1.2096 2.3908 7 9 2.6415 3.1577 1.3770 8 6 1.6786 2.1275 -1.2565 9 6 2.9338 1.5106 -1.8957 10 1 3.5106 2.2157 -2.4943 11 7 2.6773 0.2475 -2.5923 12 6 3.4926 -0.1498 -3.5894 13 8 4.4382 0.5385 -3.9101 14 6 3.2284 -1.4487 -4.3063 15 8 4.2219 -1.6471 -5.3141 16 6 4.1284 -2.7806 -6.0579 17 6 5.0598 -3.0372 -7.0533 18 7 6.1565 -2.0763 -7.3068 19 8 6.9739 -2.3018 -8.1813 20 8 6.2413 -1.0595 -6.6417 21 6 4.9628 -4.1906 -7.8079 22 6 3.9384 -5.0882 -7.5719 23 6 3.8347 -6.3452 -8.3968 24 8 3.6811 -5.9993 -9.7747 25 14 2.3598 -7.3358 -7.8363 26 6 3.0085 -4.8347 -6.5801 27 6 3.1044 -3.6861 -5.8192 28 6 3.4749 1.3277 -0.4679 29 1 -0.3633 -1.0275 -0.0194 30 1 -0.3633 0.4970 0.8995 31 1 -0.3634 0.5306 -0.8801 32 1 1.7501 3.2046 -1.1052 33 1 0.7495 1.8279 -1.7416 34 1 1.9208 -0.3028 -2.3360 35 1 3.2649 -2.2717 -3.5926 36 1 2.2427 -1.4137 -4.7704 37 1 5.6875 -4.3906 -8.5832 38 1 4.7400 -6.9387 -8.2698 39 1 3.6083 -6.7613 -10.3657 40 1 2.5227 -7.7288 -6.4135 41 1 1.1186 -6.5379 -8.0038 42 1 2.2093 -5.5378 -6.3974 43 1 2.3806 -3.4906 -5.0418 44 1 3.9962 0.3825 -0.3162 45 1 4.0389 2.1855 -0.1015 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17312452_4549638.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:16:52 Heat of formation + Delta-G solvation = -214.877978 kcal Electronic energy + Delta-G solvation = -39483.042340 eV Core-core repulsion = 33444.789354 eV Total energy + Delta-G solvation = -6038.252985 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 407.116 amu Computer time = 1.22 seconds Orbital eigenvalues (eV) -51.25732 -48.80429 -48.69133 -43.04039 -42.08948 -41.60136 -40.36455 -39.33245 -37.62984 -37.39187 -37.13196 -34.57343 -33.56443 -32.50291 -30.44255 -28.96433 -28.27513 -27.62121 -27.03720 -26.69748 -24.58889 -23.83870 -22.75185 -22.10358 -21.26385 -20.43973 -19.88319 -19.55246 -19.50276 -19.32138 -19.13960 -18.71819 -18.44458 -18.32326 -17.71616 -17.59817 -17.42842 -17.02688 -16.64577 -16.63117 -16.11365 -16.01238 -15.84487 -15.61760 -15.59077 -15.52049 -15.30615 -15.17436 -14.92359 -14.87791 -14.63748 -14.48518 -14.40068 -14.23766 -13.91262 -13.82519 -13.63282 -13.48306 -13.06018 -12.95227 -12.85457 -12.56840 -12.50469 -12.22637 -12.21034 -11.94898 -11.82161 -11.74443 -11.19445 -11.07595 -10.95552 -10.66146 -10.40235 -9.90222 -5.24112 -1.15582 -0.39925 0.36240 0.50980 0.95759 1.00508 1.28951 1.36363 1.43918 1.64229 1.79567 1.89670 2.09944 2.39426 2.50379 2.68494 2.86323 2.98421 3.06051 3.14611 3.23423 3.30743 3.38437 3.42653 3.50276 3.51482 3.59059 3.72417 3.81023 3.94757 4.00870 4.03464 4.12355 4.16728 4.19708 4.26109 4.31302 4.37733 4.42238 4.50288 4.58200 4.65813 4.89228 5.11625 5.39361 5.44539 5.68044 6.14092 6.36825 6.91837 6.93393 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.007 3.993 2 O -0.334 6.334 3 C 0.039 3.961 4 C 0.439 3.561 5 F -0.181 7.181 6 F -0.173 7.173 7 F -0.173 7.173 8 C -0.161 4.161 9 C 0.138 3.862 10 H 0.125 0.875 11 N -0.708 5.708 12 C 0.519 3.481 13 O -0.491 6.491 14 C 0.031 3.969 15 O -0.252 6.252 16 C 0.200 3.800 17 C -0.074 4.074 18 N 0.029 4.971 19 O -0.175 6.175 20 O -0.117 6.117 21 C 0.013 3.987 22 C -0.111 4.111 23 C -0.071 4.071 24 O -0.545 6.545 25 Si 0.691 3.309 26 C -0.032 4.032 27 C -0.207 4.207 28 C -0.131 4.131 29 H 0.103 0.897 30 H 0.056 0.944 31 H 0.055 0.945 32 H 0.122 0.878 33 H 0.099 0.901 34 H 0.406 0.594 35 H 0.103 0.897 36 H 0.102 0.898 37 H 0.167 0.833 38 H 0.083 0.917 39 H 0.388 0.612 40 H -0.251 1.251 41 H -0.247 1.247 42 H 0.140 0.860 43 H 0.156 0.844 44 H 0.101 0.899 45 H 0.125 0.875 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -8.273 -7.586 0.223 11.227 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 O -0.252 6.252 3 C -0.003 4.003 4 C 0.384 3.616 5 F -0.163 7.163 6 F -0.155 7.155 7 F -0.155 7.155 8 C -0.199 4.199 9 C 0.032 3.968 10 H 0.143 0.857 11 N -0.363 5.363 12 C 0.303 3.697 13 O -0.362 6.362 14 C -0.048 4.048 15 O -0.161 6.161 16 C 0.150 3.850 17 C -0.158 4.158 18 N 0.550 4.450 19 O -0.384 6.384 20 O -0.341 6.341 21 C -0.006 4.006 22 C -0.112 4.112 23 C -0.181 4.181 24 O -0.352 6.352 25 Si 0.591 3.409 26 C -0.049 4.049 27 C -0.226 4.226 28 C -0.169 4.169 29 H 0.121 0.879 30 H 0.075 0.925 31 H 0.074 0.926 32 H 0.140 0.860 33 H 0.117 0.883 34 H 0.242 0.758 35 H 0.121 0.879 36 H 0.120 0.880 37 H 0.184 0.816 38 H 0.101 0.899 39 H 0.236 0.764 40 H -0.176 1.176 41 H -0.172 1.172 42 H 0.157 0.843 43 H 0.174 0.826 44 H 0.119 0.881 45 H 0.143 0.857 Dipole moment (debyes) X Y Z Total from point charges -8.468 -7.011 0.881 11.029 hybrid contribution -0.356 0.461 0.760 0.958 sum -8.824 -6.550 1.641 11.111 Atomic orbital electron populations 1.23192 0.79434 1.04427 1.01838 1.88076 1.21120 1.22067 1.93940 1.24039 1.00196 0.86328 0.89776 1.21098 0.74160 0.78510 0.87844 1.93191 1.36207 1.89963 1.96925 1.93227 1.94019 1.70107 1.58120 1.93195 1.69693 1.55883 1.96679 1.24012 1.00358 1.01796 0.93693 1.21603 0.96311 0.86295 0.92577 0.85687 1.45433 1.31741 1.23362 1.35736 1.19790 0.83168 0.86639 0.80147 1.90874 1.27796 1.54065 1.63507 1.22701 0.92702 0.98134 0.91223 1.86494 1.49101 1.35615 1.44935 1.18636 0.91670 0.86172 0.88510 1.20574 0.94538 0.96041 1.04660 1.43296 1.00823 1.01178 0.99745 1.94554 1.35819 1.81854 1.26158 1.94694 1.79279 1.14183 1.45958 1.20809 0.96695 0.88269 0.94805 1.19251 0.96007 0.97447 0.98520 1.24642 1.10621 0.97260 0.85593 1.86491 1.96593 1.36928 1.15176 0.94645 0.77025 0.86221 0.83023 1.21113 0.95952 0.95386 0.92482 1.21203 1.00490 0.95770 1.05170 1.23732 0.91404 1.06306 0.95494 0.87875 0.92529 0.92608 0.86028 0.88309 0.75834 0.87886 0.88013 0.81602 0.89923 0.76360 1.17592 1.17174 0.84272 0.82616 0.88082 0.85677 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.03 10.41 101.05 1.05 1.03 16 2 O -0.33 0.71 9.07 -35.23 -0.32 0.39 16 3 C 0.04 -0.08 0.84 -89.81 -0.08 -0.15 16 4 C 0.44 0.00 2.58 37.16 0.10 0.09 16 5 F -0.18 -0.05 15.32 2.25 0.03 -0.01 16 6 F -0.17 -0.33 17.11 2.25 0.04 -0.29 16 7 F -0.17 -0.06 15.80 2.25 0.04 -0.03 16 8 C -0.16 0.59 6.67 -25.92 -0.17 0.42 16 9 C 0.14 -0.32 4.32 -67.12 -0.29 -0.61 16 10 H 0.13 -0.15 7.47 -51.93 -0.39 -0.54 16 11 N -0.71 1.88 5.15 -53.01 -0.27 1.60 16 12 C 0.52 0.16 7.91 -10.98 -0.09 0.07 16 13 O -0.49 -2.69 16.10 -14.35 -0.23 -2.92 16 14 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 15 O -0.25 -0.65 7.68 -49.78 -0.38 -1.03 16 16 C 0.20 0.34 6.67 -39.21 -0.26 0.07 16 17 C -0.07 -0.27 6.87 -79.81 -0.55 -0.82 16 18 N 0.03 0.20 4.45 34.03 0.15 0.35 16 19 O -0.17 -1.30 18.45 -29.46 -0.54 -1.84 16 20 O -0.12 -1.02 17.24 -36.49 -0.63 -1.65 16 21 C 0.01 0.02 9.11 -39.61 -0.36 -0.34 16 22 C -0.11 0.02 5.42 -104.60 -0.57 -0.55 16 23 C -0.07 0.18 2.81 36.01 0.10 0.28 16 24 O -0.54 1.01 12.74 -35.23 -0.45 0.56 16 25 Si 0.69 -2.70 29.78 -169.99 -5.06 -7.77 16 26 C -0.03 0.04 8.66 -39.60 -0.34 -0.30 16 27 C -0.21 0.33 9.04 -39.43 -0.36 -0.02 16 28 C -0.13 0.27 7.13 -25.92 -0.18 0.08 16 29 H 0.10 -0.55 8.14 -51.93 -0.42 -0.98 16 30 H 0.06 -0.15 6.46 -51.93 -0.34 -0.48 16 31 H 0.06 -0.30 6.54 -51.93 -0.34 -0.64 16 32 H 0.12 -0.53 8.02 -51.93 -0.42 -0.94 16 33 H 0.10 -0.48 6.57 -51.93 -0.34 -0.82 16 34 H 0.41 -2.03 7.59 -40.82 -0.31 -2.34 16 35 H 0.10 -0.53 7.65 -51.93 -0.40 -0.93 16 36 H 0.10 -0.54 7.68 -51.93 -0.40 -0.94 16 37 H 0.17 0.18 7.61 -52.49 -0.40 -0.22 16 38 H 0.08 -0.34 7.96 -51.93 -0.41 -0.76 16 39 H 0.39 -2.63 8.74 45.56 0.40 -2.23 16 40 H -0.25 0.49 7.11 56.52 0.40 0.90 16 41 H -0.25 0.28 7.11 56.52 0.40 0.68 16 42 H 0.14 -0.40 4.87 -52.49 -0.26 -0.65 16 43 H 0.16 -0.83 6.30 -52.48 -0.33 -1.16 16 44 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 45 H 0.13 -0.34 7.04 -51.93 -0.37 -0.70 16 LS Contribution 393.56 15.07 5.93 5.93 Total: 0.00 -12.81 393.56 -7.85 -20.65 By element: Atomic # 1 Polarization: -8.98 SS G_CDS: -4.33 Total: -13.32 kcal Atomic # 6 Polarization: 1.19 SS G_CDS: -1.81 Total: -0.62 kcal Atomic # 7 Polarization: 2.08 SS G_CDS: -0.12 Total: 1.96 kcal Atomic # 8 Polarization: -3.95 SS G_CDS: -2.55 Total: -6.50 kcal Atomic # 9 Polarization: -0.44 SS G_CDS: 0.11 Total: -0.33 kcal Atomic # 14 Polarization: -2.70 SS G_CDS: -5.06 Total: -7.77 kcal Total LS contribution 5.93 Total: 5.93 kcal Total: -12.81 -7.85 -20.65 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_4549638.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.227 kcal (2) G-P(sol) polarization free energy of solvation -12.806 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -207.033 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.845 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.651 kcal (6) G-S(sol) free energy of system = (1) + (5) -214.878 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.22 seconds