Wall clock time and date at job start Sun Mar 7 2021 08:17:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 117.00173 * 2 1 4 4 C 1.39156 * 120.07300 * 179.97438 * 3 2 1 5 5 O 1.36000 * 120.07113 * 0.02562 * 4 3 2 6 6 C 1.42904 * 116.99781 * 180.02562 * 5 4 3 7 7 C 1.50701 * 109.46896 * 179.97438 * 6 5 4 8 8 O 1.21277 * 120.00331 * 359.97438 * 7 6 5 9 9 N 1.34782 * 119.99847 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99668 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84810 * 336.18852 * 10 9 7 12 12 C 1.53775 * 113.61506 * 107.50265 * 10 9 7 13 13 C 1.53777 * 87.08286 * 89.11078 * 12 10 9 14 14 O 1.42903 * 113.61525 * 270.88124 * 13 12 10 15 15 C 1.42898 * 114.00028 * 162.81240 * 14 13 12 16 16 C 1.53008 * 113.69026 * 139.99022 * 13 12 10 17 17 F 1.39897 * 109.46995 * 327.15219 * 16 13 12 18 18 F 1.39904 * 109.46859 * 87.15088 * 16 13 12 19 19 F 1.39895 * 109.47282 * 207.15126 * 16 13 12 20 20 C 1.53775 * 87.08279 * 25.43286 * 13 12 10 21 21 C 1.38561 * 119.85514 * 180.02562 * 4 3 2 22 22 C 1.38239 * 119.99753 * 0.02562 * 21 4 3 23 23 C 1.38248 * 120.14851 * 0.02562 * 22 21 4 24 24 C 1.50700 * 119.92853 * 180.02562 * 23 22 21 25 25 O 1.42895 * 109.47361 * 244.97802 * 24 23 22 26 26 Si 1.86304 * 109.47018 * 4.97795 * 24 23 22 27 27 C 1.38243 * 120.14473 * 359.97438 * 23 22 21 28 28 H 1.08997 * 109.47561 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47235 * 300.00345 * 1 2 3 30 30 H 1.09004 * 109.46865 * 59.99974 * 1 2 3 31 31 H 1.08997 * 109.47119 * 300.00200 * 6 5 4 32 32 H 1.09003 * 109.47040 * 60.00048 * 6 5 4 33 33 H 0.97000 * 120.00058 * 359.97438 * 9 7 6 34 34 H 1.09000 * 113.61102 * 203.66108 * 12 10 9 35 35 H 1.08999 * 113.61736 * 334.55952 * 12 10 9 36 36 H 1.08998 * 109.47079 * 183.22593 * 15 14 13 37 37 H 1.09004 * 109.46956 * 303.22491 * 15 14 13 38 38 H 1.09002 * 109.46839 * 63.22244 * 15 14 13 39 39 H 1.08999 * 113.61321 * 220.02056 * 20 13 12 40 40 H 1.08998 * 113.62072 * 89.11358 * 20 13 12 41 41 H 1.08005 * 119.99902 * 180.02562 * 21 4 3 42 42 H 1.08001 * 119.92436 * 180.02562 * 22 21 4 43 43 H 1.09000 * 109.47439 * 124.97485 * 24 23 22 44 44 H 0.96706 * 113.99940 * 59.99902 * 25 24 23 45 45 H 1.48505 * 110.00072 * 179.97438 * 26 24 23 46 46 H 1.48499 * 109.99916 * 301.31935 * 26 24 23 47 47 H 1.07999 * 119.99635 * 179.72385 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 0.0005 5 8 4.1795 0.1475 0.0005 6 6 5.6003 0.3005 0.0017 7 6 6.2518 -1.0585 0.0021 8 8 5.5669 -2.0593 0.0020 9 7 7.5957 -1.1615 0.0037 10 6 8.2290 -2.4826 0.0036 11 1 7.5827 -3.2618 0.4078 12 6 8.8790 -2.8540 -1.3396 13 6 10.1591 -2.1814 -0.8164 14 8 10.2332 -0.7849 -1.1104 15 6 11.1903 -0.0749 -0.3217 16 6 11.4412 -2.9337 -1.1792 17 9 11.1823 -4.3081 -1.2106 18 9 11.8878 -2.5144 -2.4370 19 9 12.4255 -2.6663 -0.2218 20 6 9.6461 -2.4863 0.6008 21 6 4.0604 2.5232 0.0011 22 6 3.3030 3.6797 0.0016 23 6 1.9225 3.6056 0.0021 24 6 1.1018 4.8695 0.0021 25 8 0.3649 4.9590 1.2232 26 14 2.2311 6.3433 -0.1511 27 6 1.2933 2.3747 0.0016 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 5.9072 0.8507 -0.8878 32 1 5.9059 0.8498 0.8922 33 1 8.1435 -0.3610 0.0042 34 1 8.9815 -3.9283 -1.4927 35 1 8.4360 -2.3439 -2.1950 36 1 11.1452 0.9868 -0.5645 37 1 10.9659 -0.2156 0.7356 38 1 12.1897 -0.4543 -0.5347 39 1 9.8224 -1.6793 1.3119 40 1 9.9583 -3.4600 0.9782 41 1 5.1387 2.5838 0.0011 42 1 3.7910 4.6432 0.0016 43 1 0.4095 4.8533 -0.8397 44 1 0.9183 4.9781 2.0160 45 1 1.4338 7.5962 -0.1529 46 1 3.2007 6.3593 0.9736 47 1 0.2147 2.3196 0.0065 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17312452_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:17:18 Heat of formation + Delta-G solvation = -255.568178 kcal Electronic energy + Delta-G solvation = -37335.151273 eV Core-core repulsion = 31651.930452 eV Total energy + Delta-G solvation = -5683.220820 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -51.22882 -48.77513 -48.66162 -42.01864 -41.66200 -40.34499 -39.16525 -38.89702 -37.39266 -36.98476 -34.46494 -32.06990 -31.48124 -30.04472 -28.81796 -28.42482 -28.17504 -27.00734 -26.23993 -24.34021 -23.48282 -22.58660 -21.89596 -21.19700 -19.91572 -19.73684 -19.51894 -19.27204 -18.59948 -18.33575 -17.95628 -17.55622 -17.34747 -17.24339 -16.90582 -16.62442 -16.57020 -16.16142 -15.96205 -15.87815 -15.80614 -15.65222 -15.56944 -15.41032 -15.33452 -15.13441 -14.89466 -14.84439 -14.73674 -14.41853 -14.28957 -13.99668 -13.77282 -13.58958 -13.55764 -13.48175 -13.41346 -12.84273 -12.65186 -12.56971 -12.48102 -12.20303 -12.14003 -12.01342 -11.89659 -11.64927 -11.13924 -10.94758 -10.63801 -10.32006 -9.80069 -8.87387 -4.99626 0.16122 0.28558 1.24398 1.32299 1.41716 1.47567 1.55147 1.87929 1.92501 2.30742 2.41361 2.48108 2.54130 2.55070 2.73343 3.19896 3.28541 3.32954 3.38773 3.46083 3.61030 3.73834 3.76896 3.87261 3.88912 3.92742 3.99905 4.06686 4.11183 4.21850 4.23750 4.24700 4.28392 4.32772 4.36798 4.47772 4.51861 4.54028 4.57483 4.62951 4.64618 4.98697 5.08881 5.20572 5.35728 5.49449 5.54101 5.94126 6.26040 6.36627 6.53075 7.03375 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.039 3.961 7 C 0.520 3.480 8 O -0.505 6.505 9 N -0.708 5.708 10 C 0.138 3.862 11 H 0.123 0.877 12 C -0.131 4.131 13 C 0.040 3.960 14 O -0.334 6.334 15 C 0.008 3.992 16 C 0.438 3.562 17 F -0.174 7.174 18 F -0.174 7.174 19 F -0.181 7.181 20 C -0.161 4.161 21 C -0.169 4.169 22 C -0.115 4.115 23 C -0.113 4.113 24 C -0.073 4.073 25 O -0.530 6.530 26 Si 0.688 3.312 27 C -0.146 4.146 28 H 0.103 0.897 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.097 0.903 32 H 0.094 0.906 33 H 0.407 0.593 34 H 0.124 0.876 35 H 0.101 0.899 36 H 0.104 0.896 37 H 0.056 0.944 38 H 0.055 0.945 39 H 0.098 0.902 40 H 0.120 0.880 41 H 0.139 0.861 42 H 0.133 0.867 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.258 1.258 46 H -0.260 1.260 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.924 3.748 0.509 4.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.040 4.040 7 C 0.305 3.695 8 O -0.378 6.378 9 N -0.363 5.363 10 C 0.032 3.968 11 H 0.141 0.859 12 C -0.169 4.169 13 C -0.003 4.003 14 O -0.251 6.251 15 C -0.088 4.088 16 C 0.383 3.617 17 F -0.155 7.155 18 F -0.155 7.155 19 F -0.163 7.163 20 C -0.199 4.199 21 C -0.188 4.188 22 C -0.133 4.133 23 C -0.113 4.113 24 C -0.183 4.183 25 O -0.336 6.336 26 Si 0.589 3.411 27 C -0.165 4.165 28 H 0.121 0.879 29 H 0.075 0.925 30 H 0.075 0.925 31 H 0.115 0.885 32 H 0.112 0.888 33 H 0.243 0.757 34 H 0.142 0.858 35 H 0.119 0.881 36 H 0.122 0.878 37 H 0.074 0.926 38 H 0.073 0.927 39 H 0.117 0.883 40 H 0.138 0.862 41 H 0.157 0.843 42 H 0.150 0.850 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.183 1.183 46 H -0.185 1.185 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.102 3.437 0.321 4.042 hybrid contribution 0.685 0.195 1.172 1.372 sum 2.786 3.632 1.493 4.815 Atomic orbital electron populations 1.23133 0.78105 1.04420 1.01369 1.86248 1.21341 1.25324 1.88530 1.18279 0.89011 0.85575 1.01011 1.18274 0.88286 0.85736 1.01791 1.86275 1.15964 1.27781 1.88876 1.22449 0.81332 0.96038 1.04135 1.20030 0.82187 0.90692 0.76566 1.90805 1.62532 1.37951 1.46509 1.45467 1.05918 1.08749 1.76170 1.21579 0.93220 0.86552 0.95454 0.85899 1.23730 0.90697 1.02254 1.00267 1.24043 0.91410 0.84755 1.00078 1.88079 1.59912 1.15326 1.61803 1.23185 0.92307 0.97856 0.95465 1.21115 0.86830 0.78560 0.75170 1.93190 1.93880 1.32209 1.96219 1.93227 1.90650 1.89757 1.41844 1.93194 1.65448 1.93476 1.64166 1.24007 0.95558 1.05598 0.94709 1.20988 1.00454 0.90677 1.06698 1.20734 0.92897 0.98033 1.01592 1.19971 0.93685 0.95094 1.02590 1.25010 1.01682 1.01717 0.89853 1.86602 1.36176 1.95488 1.15369 0.94928 0.79623 0.76431 0.90089 1.20943 1.00381 0.90409 1.04741 0.87861 0.92536 0.92497 0.88511 0.88783 0.75747 0.85790 0.88053 0.87804 0.92593 0.92676 0.88313 0.86159 0.84309 0.85006 0.86416 0.77618 1.18267 1.18470 0.84197 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.21 10.28 -34.22 -0.35 -1.56 16 3 C 0.11 0.32 6.70 -39.12 -0.26 0.06 16 4 C 0.10 0.24 6.70 -39.12 -0.26 -0.02 16 5 O -0.28 -0.93 9.46 -47.37 -0.45 -1.38 16 6 C 0.04 -0.04 5.22 36.01 0.19 0.14 16 7 C 0.52 0.46 7.91 -10.98 -0.09 0.38 16 8 O -0.51 -2.95 16.10 -14.35 -0.23 -3.18 16 9 N -0.71 1.54 5.15 -53.02 -0.27 1.27 16 10 C 0.14 -0.28 4.33 -67.12 -0.29 -0.57 16 11 H 0.12 -0.12 7.46 -51.93 -0.39 -0.51 16 12 C -0.13 0.25 7.13 -25.92 -0.18 0.06 16 13 C 0.04 -0.07 0.84 -89.81 -0.08 -0.15 16 14 O -0.33 0.63 9.06 -35.23 -0.32 0.32 16 15 C 0.01 -0.03 10.33 101.05 1.04 1.02 16 16 C 0.44 0.03 2.52 37.16 0.09 0.12 16 17 F -0.17 -0.07 15.82 2.25 0.04 -0.03 16 18 F -0.17 -0.33 17.10 2.25 0.04 -0.29 16 19 F -0.18 -0.06 15.35 2.25 0.03 -0.02 16 20 C -0.16 0.56 6.66 -25.92 -0.17 0.39 16 21 C -0.17 0.11 9.04 -39.46 -0.36 -0.25 16 22 C -0.11 0.10 8.66 -39.58 -0.34 -0.24 16 23 C -0.11 -0.01 5.35 -104.62 -0.56 -0.57 16 24 C -0.07 0.04 2.80 36.01 0.10 0.15 16 25 O -0.53 -0.46 12.83 -35.23 -0.45 -0.91 16 26 Si 0.69 -1.08 29.88 -169.99 -5.08 -6.15 16 27 C -0.15 -0.18 8.67 -39.46 -0.34 -0.52 16 28 H 0.10 -0.13 8.14 -51.93 -0.42 -0.55 16 29 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 30 H 0.06 -0.06 7.67 -51.93 -0.40 -0.46 16 31 H 0.10 -0.37 7.66 -51.93 -0.40 -0.76 16 32 H 0.09 -0.37 7.67 -51.93 -0.40 -0.77 16 33 H 0.41 -1.80 7.59 -40.82 -0.31 -2.11 16 34 H 0.12 -0.32 7.03 -51.93 -0.36 -0.69 16 35 H 0.10 -0.12 8.14 -51.93 -0.42 -0.54 16 36 H 0.10 -0.53 8.14 -51.93 -0.42 -0.96 16 37 H 0.06 -0.28 6.60 -51.93 -0.34 -0.62 16 38 H 0.05 -0.13 6.58 -51.93 -0.34 -0.47 16 39 H 0.10 -0.45 6.68 -51.93 -0.35 -0.80 16 40 H 0.12 -0.50 8.04 -51.93 -0.42 -0.92 16 41 H 0.14 -0.52 6.30 -52.48 -0.33 -0.86 16 42 H 0.13 -0.38 4.83 -52.49 -0.25 -0.63 16 43 H 0.12 -0.15 7.96 -51.93 -0.41 -0.57 16 44 H 0.38 -0.71 8.70 45.56 0.40 -0.32 16 45 H -0.26 -0.49 7.11 56.52 0.40 -0.09 16 46 H -0.26 -0.02 7.01 56.52 0.40 0.38 16 47 H 0.14 0.03 6.30 -52.49 -0.33 -0.30 16 LS Contribution 396.95 15.07 5.98 5.98 Total: 0.00 -10.90 396.95 -7.09 -17.99 By element: Atomic # 1 Polarization: -7.49 SS G_CDS: -5.51 Total: -12.99 kcal Atomic # 6 Polarization: 1.51 SS G_CDS: -0.52 Total: 0.99 kcal Atomic # 7 Polarization: 1.54 SS G_CDS: -0.27 Total: 1.27 kcal Atomic # 8 Polarization: -4.92 SS G_CDS: -1.80 Total: -6.72 kcal Atomic # 9 Polarization: -0.46 SS G_CDS: 0.11 Total: -0.35 kcal Atomic # 14 Polarization: -1.08 SS G_CDS: -5.08 Total: -6.15 kcal Total LS contribution 5.98 Total: 5.98 kcal Total: -10.90 -7.09 -17.99 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -237.583 kcal (2) G-P(sol) polarization free energy of solvation -10.898 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -248.481 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.087 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.985 kcal (6) G-S(sol) free energy of system = (1) + (5) -255.568 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds