Wall clock time and date at job start Sun Mar 7 2021 08:17:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35993 * 117.00173 * 2 1 4 4 C 1.39156 * 120.07300 * 179.97438 * 3 2 1 5 5 O 1.36000 * 120.07113 * 0.02562 * 4 3 2 6 6 C 1.42904 * 116.99781 * 180.02562 * 5 4 3 7 7 C 1.50701 * 109.46896 * 179.97438 * 6 5 4 8 8 O 1.21277 * 120.00331 * 359.97438 * 7 6 5 9 9 N 1.34782 * 119.99847 * 180.02562 * 7 6 5 10 10 C 1.46502 * 119.99668 * 180.02562 * 9 7 6 11 11 H 1.09001 * 112.84810 * 336.18852 * 10 9 7 12 12 C 1.53775 * 113.61506 * 107.50265 * 10 9 7 13 13 C 1.53777 * 87.08286 * 89.11078 * 12 10 9 14 14 O 1.42903 * 113.61525 * 270.88124 * 13 12 10 15 15 C 1.42898 * 114.00028 * 162.81240 * 14 13 12 16 16 C 1.53008 * 113.69026 * 139.99022 * 13 12 10 17 17 F 1.39897 * 109.46995 * 327.15219 * 16 13 12 18 18 F 1.39904 * 109.46859 * 87.15088 * 16 13 12 19 19 F 1.39895 * 109.47282 * 207.15126 * 16 13 12 20 20 C 1.53775 * 87.08279 * 25.43286 * 13 12 10 21 21 C 1.38561 * 119.85514 * 180.02562 * 4 3 2 22 22 C 1.38239 * 119.99753 * 0.02562 * 21 4 3 23 23 C 1.38248 * 120.14851 * 0.02562 * 22 21 4 24 24 C 1.50700 * 119.92853 * 180.02562 * 23 22 21 25 25 O 1.42895 * 109.47361 * 244.97802 * 24 23 22 26 26 Si 1.86304 * 109.47018 * 4.97795 * 24 23 22 27 27 C 1.38243 * 120.14473 * 359.97438 * 23 22 21 28 28 H 1.08997 * 109.47561 * 179.97438 * 1 2 3 29 29 H 1.09003 * 109.47235 * 300.00345 * 1 2 3 30 30 H 1.09004 * 109.46865 * 59.99974 * 1 2 3 31 31 H 1.08997 * 109.47119 * 300.00200 * 6 5 4 32 32 H 1.09003 * 109.47040 * 60.00048 * 6 5 4 33 33 H 0.97000 * 120.00058 * 359.97438 * 9 7 6 34 34 H 1.09000 * 113.61102 * 203.66108 * 12 10 9 35 35 H 1.08999 * 113.61736 * 334.55952 * 12 10 9 36 36 H 1.08998 * 109.47079 * 183.22593 * 15 14 13 37 37 H 1.09004 * 109.46956 * 303.22491 * 15 14 13 38 38 H 1.09002 * 109.46839 * 63.22244 * 15 14 13 39 39 H 1.08999 * 113.61321 * 220.02056 * 20 13 12 40 40 H 1.08998 * 113.62072 * 89.11358 * 20 13 12 41 41 H 1.08005 * 119.99902 * 180.02562 * 21 4 3 42 42 H 1.08001 * 119.92436 * 180.02562 * 22 21 4 43 43 H 1.09000 * 109.47439 * 124.97485 * 24 23 22 44 44 H 0.96706 * 113.99940 * 59.99902 * 25 24 23 45 45 H 1.48505 * 110.00072 * 179.97438 * 26 24 23 46 46 H 1.48499 * 109.99916 * 301.31935 * 26 24 23 47 47 H 1.07999 * 119.99635 * 179.72385 * 27 23 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4360 1.2862 0.0005 5 8 4.1795 0.1475 0.0005 6 6 5.6003 0.3005 0.0017 7 6 6.2518 -1.0585 0.0021 8 8 5.5669 -2.0593 0.0020 9 7 7.5957 -1.1615 0.0037 10 6 8.2290 -2.4826 0.0036 11 1 7.5827 -3.2618 0.4078 12 6 8.8790 -2.8540 -1.3396 13 6 10.1591 -2.1814 -0.8164 14 8 10.2332 -0.7849 -1.1104 15 6 11.1903 -0.0749 -0.3217 16 6 11.4412 -2.9337 -1.1792 17 9 11.1823 -4.3081 -1.2106 18 9 11.8878 -2.5144 -2.4370 19 9 12.4255 -2.6663 -0.2218 20 6 9.6461 -2.4863 0.6008 21 6 4.0604 2.5232 0.0011 22 6 3.3030 3.6797 0.0016 23 6 1.9225 3.6056 0.0021 24 6 1.1018 4.8695 0.0021 25 8 0.3649 4.9590 1.2232 26 14 2.2311 6.3433 -0.1511 27 6 1.2933 2.3747 0.0016 28 1 -0.3634 -1.0276 -0.0005 29 1 -0.3634 0.5139 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 5.9072 0.8507 -0.8878 32 1 5.9059 0.8498 0.8922 33 1 8.1435 -0.3610 0.0042 34 1 8.9815 -3.9283 -1.4927 35 1 8.4360 -2.3439 -2.1950 36 1 11.1452 0.9868 -0.5645 37 1 10.9659 -0.2156 0.7356 38 1 12.1897 -0.4543 -0.5347 39 1 9.8224 -1.6793 1.3119 40 1 9.9583 -3.4600 0.9782 41 1 5.1387 2.5838 0.0011 42 1 3.7910 4.6432 0.0016 43 1 0.4095 4.8533 -0.8397 44 1 0.9183 4.9781 2.0160 45 1 1.4338 7.5962 -0.1529 46 1 3.2007 6.3593 0.9736 47 1 0.2147 2.3196 0.0065 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17312452_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 08:17:17 Heat of formation + Delta-G solvation = -258.097697 kcal Electronic energy + Delta-G solvation = -37335.260961 eV Core-core repulsion = 31651.930452 eV Total energy + Delta-G solvation = -5683.330509 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 392.137 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -51.24697 -48.78308 -48.71713 -41.95019 -41.61185 -40.34280 -39.22131 -38.90086 -37.25247 -36.98174 -34.43908 -32.04449 -31.45480 -29.97485 -28.69018 -28.37357 -28.01671 -26.78309 -26.20132 -24.26871 -23.44273 -22.58106 -21.84449 -21.09798 -19.87968 -19.72130 -19.53230 -19.21549 -18.58573 -18.32731 -17.94215 -17.51630 -17.24450 -17.19785 -16.81890 -16.65164 -16.38507 -16.12705 -15.87162 -15.79949 -15.72842 -15.66714 -15.57862 -15.43334 -15.29908 -15.15983 -14.93521 -14.88650 -14.69757 -14.35623 -14.27564 -13.84482 -13.76890 -13.52187 -13.43470 -13.40880 -13.20007 -12.63089 -12.61525 -12.57304 -12.28599 -12.15888 -12.12777 -11.98581 -11.72291 -11.61458 -11.05802 -10.93477 -10.60110 -10.25940 -9.77628 -8.91015 -4.87283 0.17937 0.29147 1.34259 1.40110 1.43388 1.53194 1.63903 2.00318 2.07834 2.32129 2.51408 2.56595 2.57979 2.61414 2.84946 3.29254 3.40297 3.42119 3.48324 3.57958 3.67035 3.86780 3.91258 4.05979 4.12435 4.14120 4.15860 4.29308 4.30622 4.31914 4.35507 4.37279 4.44472 4.45644 4.58152 4.63109 4.65734 4.67489 4.70987 4.76621 4.85036 5.02019 5.13757 5.32954 5.38343 5.60300 5.72226 5.97383 6.38328 6.50418 6.54210 7.10145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.020 3.980 2 O -0.334 6.334 3 C 0.077 3.923 4 C 0.086 3.914 5 O -0.313 6.313 6 C 0.034 3.966 7 C 0.518 3.482 8 O -0.566 6.566 9 N -0.690 5.690 10 C 0.133 3.867 11 H 0.110 0.890 12 C -0.133 4.133 13 C 0.044 3.956 14 O -0.341 6.341 15 C 0.001 3.999 16 C 0.433 3.567 17 F -0.178 7.178 18 F -0.187 7.187 19 F -0.183 7.183 20 C -0.147 4.147 21 C -0.160 4.160 22 C -0.111 4.111 23 C -0.115 4.115 24 C -0.085 4.085 25 O -0.551 6.551 26 Si 0.776 3.224 27 C -0.152 4.152 28 H 0.111 0.889 29 H 0.062 0.938 30 H 0.065 0.935 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.421 0.579 34 H 0.127 0.873 35 H 0.092 0.908 36 H 0.121 0.879 37 H 0.073 0.927 38 H 0.040 0.960 39 H 0.117 0.883 40 H 0.129 0.871 41 H 0.175 0.825 42 H 0.157 0.843 43 H 0.121 0.879 44 H 0.386 0.614 45 H -0.308 1.308 46 H -0.273 1.273 47 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.413 5.557 0.934 7.158 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.074 4.074 2 O -0.248 6.248 3 C 0.031 3.969 4 C 0.041 3.959 5 O -0.227 6.227 6 C -0.043 4.043 7 C 0.305 3.695 8 O -0.444 6.444 9 N -0.345 5.345 10 C 0.027 3.973 11 H 0.127 0.873 12 C -0.171 4.171 13 C 0.001 3.999 14 O -0.259 6.259 15 C -0.094 4.094 16 C 0.378 3.622 17 F -0.159 7.159 18 F -0.169 7.169 19 F -0.164 7.164 20 C -0.185 4.185 21 C -0.178 4.178 22 C -0.129 4.129 23 C -0.116 4.116 24 C -0.193 4.193 25 O -0.359 6.359 26 Si 0.681 3.319 27 C -0.170 4.170 28 H 0.129 0.871 29 H 0.080 0.920 30 H 0.084 0.916 31 H 0.145 0.855 32 H 0.145 0.855 33 H 0.259 0.741 34 H 0.145 0.855 35 H 0.111 0.889 36 H 0.139 0.861 37 H 0.092 0.908 38 H 0.059 0.941 39 H 0.135 0.865 40 H 0.147 0.853 41 H 0.193 0.807 42 H 0.174 0.826 43 H 0.139 0.861 44 H 0.236 0.764 45 H -0.237 1.237 46 H -0.199 1.199 47 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges 3.639 5.252 0.746 6.432 hybrid contribution 0.241 -0.330 1.036 1.114 sum 3.879 4.922 1.783 6.516 Atomic orbital electron populations 1.23280 0.76849 1.05194 1.02073 1.86189 1.22949 1.26596 1.89077 1.18667 0.89921 0.85617 1.02666 1.18574 0.88162 0.86509 1.02655 1.86220 1.18124 1.29022 1.89288 1.22757 0.79399 0.95096 1.07082 1.20519 0.82697 0.90924 0.75381 1.90781 1.63936 1.39984 1.49657 1.45345 1.05168 1.09356 1.74607 1.21572 0.93705 0.86391 0.95667 0.87251 1.23750 0.90839 1.02543 0.99996 1.24037 0.90026 0.84820 1.01013 1.88074 1.60233 1.15027 1.62538 1.23365 0.91218 0.98486 0.96337 1.21489 0.87495 0.78578 0.74615 1.93178 1.93902 1.32651 1.96202 1.93194 1.90919 1.89892 1.42885 1.93187 1.65714 1.93469 1.64077 1.23999 0.93617 1.06772 0.94082 1.21372 1.02240 0.89332 1.04842 1.21038 0.92450 0.99098 1.00306 1.20106 0.94417 0.94693 1.02399 1.25306 1.02204 1.02261 0.89544 1.86572 1.37391 1.95597 1.16317 0.93959 0.77337 0.72369 0.88258 1.21017 1.00504 0.90553 1.04973 0.87102 0.91976 0.91603 0.85459 0.85460 0.74064 0.85467 0.88911 0.86074 0.90837 0.94108 0.86524 0.85319 0.80731 0.82567 0.86092 0.76448 1.23668 1.19878 0.84132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.04 9.81 113.37 1.11 1.15 16 2 O -0.33 -3.47 10.28 -79.61 -0.82 -4.29 16 3 C 0.08 0.56 6.70 22.57 0.15 0.71 16 4 C 0.09 0.40 6.70 22.57 0.15 0.55 16 5 O -0.31 -2.32 9.46 -67.14 -0.63 -2.96 16 6 C 0.03 -0.12 5.22 71.24 0.37 0.25 16 7 C 0.52 1.04 7.91 87.66 0.69 1.74 16 8 O -0.57 -7.76 16.10 16.02 0.26 -7.50 16 9 N -0.69 3.46 5.15 -440.03 -2.27 1.19 16 10 C 0.13 -0.53 4.33 45.52 0.20 -0.33 16 11 H 0.11 -0.07 7.46 -2.39 -0.02 -0.09 16 12 C -0.13 0.44 7.13 31.12 0.22 0.67 16 13 C 0.04 -0.18 0.84 -10.27 -0.01 -0.19 16 14 O -0.34 1.67 9.06 -148.98 -1.35 0.32 16 15 C 0.00 -0.01 10.33 113.37 1.17 1.16 16 16 C 0.43 0.09 2.52 71.98 0.18 0.27 16 17 F -0.18 -0.21 15.82 44.97 0.71 0.51 16 18 F -0.19 -0.81 17.10 44.97 0.77 -0.05 16 19 F -0.18 -0.07 15.35 44.97 0.69 0.62 16 20 C -0.15 1.16 6.66 31.12 0.21 1.37 16 21 C -0.16 0.52 9.04 22.35 0.20 0.72 16 22 C -0.11 0.42 8.66 22.27 0.19 0.61 16 23 C -0.12 0.06 5.35 -19.86 -0.11 -0.05 16 24 C -0.09 0.15 2.80 71.24 0.20 0.35 16 25 O -0.55 -0.95 12.83 -148.98 -1.91 -2.86 16 26 Si 0.78 -3.39 29.88 68.60 2.05 -1.34 16 27 C -0.15 -0.48 8.67 22.35 0.19 -0.29 16 28 H 0.11 -0.07 8.14 -2.39 -0.02 -0.09 16 29 H 0.06 0.00 7.66 -2.39 -0.02 -0.01 16 30 H 0.07 -0.04 7.67 -2.39 -0.02 -0.06 16 31 H 0.13 -1.27 7.66 -2.39 -0.02 -1.29 16 32 H 0.13 -1.34 7.67 -2.39 -0.02 -1.36 16 33 H 0.42 -4.54 7.59 -92.71 -0.70 -5.24 16 34 H 0.13 -0.55 7.03 -2.39 -0.02 -0.57 16 35 H 0.09 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.12 -1.50 8.14 -2.39 -0.02 -1.52 16 37 H 0.07 -0.91 6.60 -2.38 -0.02 -0.92 16 38 H 0.04 -0.22 6.58 -2.39 -0.02 -0.24 16 39 H 0.12 -1.33 6.68 -2.39 -0.02 -1.34 16 40 H 0.13 -1.19 8.04 -2.39 -0.02 -1.21 16 41 H 0.18 -2.00 6.30 -2.91 -0.02 -2.02 16 42 H 0.16 -1.40 4.83 -2.91 -0.01 -1.42 16 43 H 0.12 -0.34 7.96 -2.39 -0.02 -0.36 16 44 H 0.39 -1.54 8.70 -74.05 -0.64 -2.18 16 45 H -0.31 -1.29 7.11 99.48 0.71 -0.58 16 46 H -0.27 0.58 7.01 99.48 0.70 1.28 16 47 H 0.14 0.25 6.30 -2.91 -0.02 0.23 16 Total: 0.00 -29.22 396.95 2.38 -26.83 By element: Atomic # 1 Polarization: -18.93 SS G_CDS: -0.25 Total: -19.17 kcal Atomic # 6 Polarization: 3.57 SS G_CDS: 5.13 Total: 8.70 kcal Atomic # 7 Polarization: 3.46 SS G_CDS: -2.27 Total: 1.19 kcal Atomic # 8 Polarization: -12.83 SS G_CDS: -4.46 Total: -17.29 kcal Atomic # 9 Polarization: -1.09 SS G_CDS: 2.17 Total: 1.08 kcal Atomic # 14 Polarization: -3.39 SS G_CDS: 2.05 Total: -1.34 kcal Total: -29.22 2.38 -26.83 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17312452_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -231.264 kcal (2) G-P(sol) polarization free energy of solvation -29.215 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -260.479 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.382 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.834 kcal (6) G-S(sol) free energy of system = (1) + (5) -258.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds