Wall clock time and date at job start Sun Mar 7 2021 07:02:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42897 * 1 3 3 C 1.42896 * 113.99867 * 2 1 4 4 C 1.53003 * 112.85214 * 294.01181 * 3 2 1 5 5 F 1.39892 * 109.47174 * 195.88973 * 4 3 2 6 6 F 1.39903 * 109.46818 * 315.89261 * 4 3 2 7 7 F 1.39897 * 109.47066 * 75.88766 * 4 3 2 8 8 C 1.53784 * 113.69164 * 162.74222 * 3 2 1 9 9 C 1.53778 * 87.08332 * 270.87307 * 8 3 2 10 10 H 1.08997 * 113.68955 * 220.00549 * 9 8 3 11 11 C 1.52995 * 113.61419 * 89.11356 * 9 8 3 12 12 N 1.46508 * 109.47188 * 87.50551 * 11 9 8 13 13 C 1.34773 * 120.00157 * 180.02562 * 12 11 9 14 14 O 1.21280 * 119.99932 * 359.97438 * 13 12 11 15 15 C 1.50697 * 120.00307 * 179.97438 * 13 12 11 16 16 O 1.42903 * 109.47536 * 179.97438 * 15 13 12 17 17 C 1.35913 * 116.99738 * 180.02562 * 16 15 13 18 18 C 1.38792 * 120.05393 * 180.02562 * 17 16 15 19 19 Br 1.89095 * 120.03734 * 359.97438 * 18 17 16 20 20 C 1.38242 * 119.92715 * 179.97438 * 18 17 16 21 21 C 1.38245 * 120.04487 * 359.97438 * 20 18 17 22 22 C 1.50697 * 119.94023 * 179.97438 * 21 20 18 23 23 O 1.42904 * 109.46798 * 299.99791 * 22 21 20 24 24 Si 1.86297 * 109.47123 * 179.97438 * 22 21 20 25 25 C 1.38282 * 120.11565 * 0.24961 * 21 20 18 26 26 C 1.38144 * 120.07553 * 359.50074 * 25 21 20 27 27 C 1.53780 * 113.61678 * 65.20899 * 3 2 1 28 28 H 1.09004 * 109.47177 * 64.84434 * 1 2 3 29 29 H 1.09001 * 109.47100 * 184.84365 * 1 2 3 30 30 H 1.08997 * 109.47262 * 304.84412 * 1 2 3 31 31 H 1.08999 * 113.61268 * 156.32165 * 8 3 2 32 32 H 1.09006 * 113.61192 * 25.41998 * 8 3 2 33 33 H 1.09001 * 109.47869 * 327.50430 * 11 9 8 34 34 H 1.08998 * 109.47450 * 207.50200 * 11 9 8 35 35 H 0.96998 * 119.99795 * 359.97438 * 12 11 9 36 36 H 1.09003 * 109.47069 * 59.99249 * 15 13 12 37 37 H 1.09000 * 109.47238 * 300.00063 * 15 13 12 38 38 H 1.07997 * 119.97913 * 180.02562 * 20 18 17 39 39 H 1.08998 * 109.47633 * 59.99783 * 22 21 20 40 40 H 0.96697 * 114.00009 * 299.99719 * 23 22 21 41 41 H 1.48500 * 110.00395 * 179.97438 * 24 22 21 42 42 H 1.48501 * 110.00211 * 301.31686 * 24 22 21 43 43 H 1.08005 * 119.95925 * 179.71888 * 25 21 20 44 44 H 1.07997 * 120.02617 * 180.25349 * 26 25 21 45 45 H 1.08999 * 113.61248 * 334.65033 * 27 3 2 46 46 H 1.09000 * 113.69374 * 203.76153 * 27 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7277 2.0816 -1.2879 5 9 2.6015 3.1704 -1.3774 6 9 1.9160 1.2406 -2.3900 7 9 0.4072 2.5433 -1.2740 8 6 3.4901 1.3230 0.4178 9 6 2.9981 1.4841 1.8658 10 1 3.5936 2.1809 2.4557 11 6 2.7565 0.1543 2.5826 12 7 4.0030 -0.2981 3.2057 13 6 4.0299 -1.4551 3.8964 14 8 3.0222 -2.1215 4.0025 15 6 5.3121 -1.9206 4.5369 16 8 5.0866 -3.1627 5.2065 17 6 6.1496 -3.7234 5.8413 18 6 6.0018 -4.9298 6.5114 19 35 4.3209 -5.7954 6.5430 20 6 7.0849 -5.4979 7.1558 21 6 8.3140 -4.8655 7.1323 22 6 9.4930 -5.4867 7.8360 23 8 9.1998 -5.6216 9.2281 24 14 10.9897 -4.3989 7.6186 25 6 8.4622 -3.6612 6.4691 26 6 7.3844 -3.0917 5.8193 27 6 1.7210 2.1085 1.2792 28 1 -0.3634 0.4369 -0.9302 29 1 -0.3633 -1.0240 0.0868 30 1 -0.3633 0.5871 0.8434 31 1 4.0389 2.1875 0.0443 32 1 4.0067 0.3808 0.2345 33 1 2.4193 -0.5909 1.8622 34 1 1.9945 0.2884 3.3503 35 1 4.8090 0.2348 3.1205 36 1 5.6497 -1.1757 5.2575 37 1 6.0741 -2.0546 3.7690 38 1 6.9710 -6.4368 7.6771 39 1 9.6938 -6.4697 7.4101 40 1 9.0106 -4.7843 9.6732 41 1 12.1592 -5.0001 8.3085 42 1 11.2859 -4.2253 6.1738 43 1 9.4225 -3.1671 6.4563 44 1 7.5019 -2.1531 5.2981 45 1 0.8094 1.8006 1.7913 46 1 1.7857 3.1880 1.1426 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17317796_6201210.mol2 46 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:01 Heat of formation + Delta-G solvation = -224.406398 kcal Electronic energy + Delta-G solvation = -36504.928043 eV Core-core repulsion = 30801.922688 eV Total energy + Delta-G solvation = -5703.005355 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 454.048 amu Computer time = 1.37 seconds Orbital eigenvalues (eV) -51.24341 -48.77634 -48.72157 -41.74460 -41.43402 -40.41489 -39.06892 -37.41724 -37.17114 -35.38327 -33.60191 -31.94163 -31.02134 -30.33020 -29.28241 -28.13773 -26.93135 -26.71640 -26.12754 -23.97158 -23.28189 -22.39040 -21.70054 -20.60059 -19.75772 -19.55430 -19.51926 -19.25300 -18.44062 -18.04227 -17.51796 -17.25524 -17.05442 -16.93883 -16.47469 -16.38212 -16.03847 -15.96892 -15.70632 -15.65343 -15.62740 -15.55710 -15.20161 -15.12685 -14.94764 -14.87309 -14.73142 -14.66595 -14.41855 -14.26942 -14.06117 -13.79272 -13.75538 -13.62066 -13.18325 -13.01287 -12.68909 -12.35307 -12.19811 -12.13043 -12.09644 -11.99392 -11.89811 -11.81534 -11.61139 -11.21829 -11.00876 -10.83518 -10.41956 -10.12352 -9.95928 -9.29681 -4.96385 -0.03909 0.13651 0.65639 1.35323 1.44234 1.51283 1.56090 1.67373 2.03159 2.12148 2.41670 2.50843 2.61083 2.67124 2.92929 3.33451 3.35149 3.49966 3.50769 3.58287 3.68384 3.72856 3.78254 3.87869 4.06385 4.12282 4.13884 4.21737 4.26122 4.35760 4.39253 4.48164 4.52202 4.55487 4.65882 4.66187 4.71998 4.78946 4.84623 4.86371 4.88423 5.01847 5.14223 5.25167 5.37792 5.50416 5.73804 6.09124 6.50328 6.80421 7.19472 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.346 6.346 3 C 0.029 3.971 4 C 0.430 3.570 5 F -0.174 7.174 6 F -0.191 7.191 7 F -0.188 7.188 8 C -0.111 4.111 9 C -0.095 4.095 10 H 0.134 0.866 11 C 0.132 3.868 12 N -0.705 5.705 13 C 0.510 3.490 14 O -0.571 6.571 15 C 0.032 3.968 16 O -0.306 6.306 17 C 0.149 3.851 18 C -0.145 4.145 19 Br -0.056 7.056 20 C -0.036 4.036 21 C -0.153 4.153 22 C -0.077 4.077 23 O -0.558 6.558 24 Si 0.790 3.210 25 C -0.055 4.055 26 C -0.188 4.188 27 C -0.141 4.141 28 H 0.045 0.955 29 H 0.104 0.896 30 H 0.068 0.932 31 H 0.131 0.869 32 H 0.093 0.907 33 H 0.067 0.933 34 H 0.064 0.936 35 H 0.423 0.577 36 H 0.136 0.864 37 H 0.130 0.870 38 H 0.134 0.866 39 H 0.104 0.896 40 H 0.396 0.604 41 H -0.306 1.306 42 H -0.274 1.274 43 H 0.166 0.834 44 H 0.182 0.818 45 H 0.096 0.904 46 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.396 10.141 1.549 12.089 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.088 4.088 2 O -0.264 6.264 3 C -0.014 4.014 4 C 0.376 3.624 5 F -0.156 7.156 6 F -0.172 7.172 7 F -0.169 7.169 8 C -0.148 4.148 9 C -0.114 4.114 10 H 0.152 0.848 11 C 0.008 3.992 12 N -0.360 5.360 13 C 0.296 3.704 14 O -0.450 6.450 15 C -0.045 4.045 16 O -0.219 6.219 17 C 0.101 3.899 18 C -0.225 4.225 19 Br 0.029 6.971 20 C -0.056 4.056 21 C -0.154 4.154 22 C -0.186 4.186 23 O -0.367 6.367 24 Si 0.695 3.305 25 C -0.072 4.072 26 C -0.207 4.207 27 C -0.179 4.179 28 H 0.063 0.937 29 H 0.123 0.877 30 H 0.087 0.913 31 H 0.149 0.851 32 H 0.112 0.888 33 H 0.085 0.915 34 H 0.082 0.918 35 H 0.261 0.739 36 H 0.154 0.846 37 H 0.148 0.852 38 H 0.152 0.848 39 H 0.121 0.879 40 H 0.246 0.754 41 H -0.234 1.234 42 H -0.201 1.201 43 H 0.183 0.817 44 H 0.199 0.801 45 H 0.114 0.886 46 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 5.801 8.559 1.128 10.401 hybrid contribution -0.524 -0.307 -0.901 1.087 sum 5.277 8.252 0.227 9.798 Atomic orbital electron populations 1.23200 0.79129 1.04879 1.01567 1.88088 1.21711 1.22827 1.93806 1.24321 1.01420 0.86117 0.89519 1.21625 0.74068 0.78755 0.87964 1.93166 1.69262 1.56487 1.96642 1.93185 1.94861 1.71377 1.57779 1.93177 1.37123 1.89758 1.96867 1.23390 0.89946 1.05975 0.95450 1.22289 0.97563 0.96321 0.95191 0.84822 1.21246 0.86141 0.95288 0.96516 1.45566 1.14402 1.22601 1.53461 1.20516 0.89893 0.81264 0.78761 1.90797 1.37255 1.56171 1.60734 1.22875 0.96172 0.86029 0.99424 1.86251 1.33269 1.37172 1.65183 1.18809 0.87637 0.91473 0.91993 1.21281 0.93696 0.98003 1.09547 1.96759 1.24001 1.78147 1.98202 1.20856 0.90493 0.99272 0.94986 1.20371 0.95257 0.97052 1.02757 1.25288 1.03185 1.06711 0.83379 1.86485 1.92829 1.37723 1.19620 0.93751 0.72604 0.85087 0.79063 1.21266 0.99496 0.93119 0.93336 1.21581 0.90243 1.03516 1.05336 1.23657 1.00403 1.01471 0.92325 0.93666 0.87717 0.91307 0.85123 0.88796 0.91478 0.91794 0.73884 0.84636 0.85229 0.84789 0.87875 0.75412 1.23405 1.20092 0.81688 0.80073 0.88580 0.85775 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 113.37 1.17 1.16 16 2 O -0.35 -0.41 8.37 -148.98 -1.25 -1.65 16 3 C 0.03 -0.09 0.84 -10.27 -0.01 -0.09 16 4 C 0.43 0.47 2.52 71.98 0.18 0.65 16 5 F -0.17 0.02 15.81 44.97 0.71 0.73 16 6 F -0.19 -1.11 17.10 44.97 0.77 -0.34 16 7 F -0.19 -0.48 15.39 44.97 0.69 0.21 16 8 C -0.11 0.91 6.89 31.12 0.21 1.13 16 9 C -0.10 1.01 3.94 -10.27 -0.04 0.97 16 10 H 0.13 -2.17 8.14 -2.39 -0.02 -2.19 16 11 C 0.13 -0.61 5.26 86.38 0.45 -0.16 16 12 N -0.71 5.34 5.56 -463.06 -2.57 2.77 16 13 C 0.51 0.13 7.91 87.66 0.69 0.82 16 14 O -0.57 -7.55 16.50 16.01 0.26 -7.28 16 15 C 0.03 -0.21 5.22 71.24 0.37 0.16 16 16 O -0.31 -1.18 9.00 -73.54 -0.66 -1.84 16 17 C 0.15 0.23 6.68 22.52 0.15 0.38 16 18 C -0.15 -0.78 6.24 22.40 0.14 -0.64 16 19 Br -0.06 -0.54 33.16 -20.37 -0.68 -1.22 16 20 C -0.04 -0.10 9.35 22.27 0.21 0.11 16 21 C -0.15 0.33 5.39 -19.85 -0.11 0.22 16 22 C -0.08 0.21 2.82 71.24 0.20 0.41 16 23 O -0.56 0.59 12.77 -148.98 -1.90 -1.31 16 24 Si 0.79 -4.83 29.78 68.60 2.04 -2.79 16 25 C -0.05 0.37 8.66 22.26 0.19 0.56 16 26 C -0.19 1.24 9.04 22.36 0.20 1.44 16 27 C -0.14 1.14 6.51 31.12 0.20 1.34 16 28 H 0.04 0.01 6.69 -2.38 -0.02 -0.01 16 29 H 0.10 -0.23 8.14 -2.39 -0.02 -0.25 16 30 H 0.07 -0.29 6.55 -2.39 -0.02 -0.30 16 31 H 0.13 -1.45 7.02 -2.39 -0.02 -1.46 16 32 H 0.09 -0.66 8.10 -2.38 -0.02 -0.68 16 33 H 0.07 0.08 6.13 -2.39 -0.01 0.07 16 34 H 0.06 -0.13 8.14 -2.39 -0.02 -0.15 16 35 H 0.42 -6.87 8.47 -92.71 -0.79 -7.65 16 36 H 0.14 -1.95 7.66 -2.39 -0.02 -1.97 16 37 H 0.13 -1.73 7.66 -2.39 -0.02 -1.75 16 38 H 0.13 0.48 8.06 -2.91 -0.02 0.45 16 39 H 0.10 -0.08 7.96 -2.39 -0.02 -0.09 16 40 H 0.40 -3.73 8.70 -74.06 -0.64 -4.37 16 41 H -0.31 -0.84 7.11 99.48 0.71 -0.14 16 42 H -0.27 0.83 7.11 99.48 0.71 1.54 16 43 H 0.17 -2.13 4.87 -2.91 -0.01 -2.14 16 44 H 0.18 -2.78 6.30 -2.91 -0.02 -2.80 16 45 H 0.10 -0.75 6.63 -2.39 -0.02 -0.76 16 46 H 0.12 -1.31 8.05 -2.39 -0.02 -1.33 16 Total: 0.00 -31.60 408.48 1.34 -30.26 By element: Atomic # 1 Polarization: -25.69 SS G_CDS: -0.30 Total: -26.00 kcal Atomic # 6 Polarization: 4.24 SS G_CDS: 4.22 Total: 8.46 kcal Atomic # 7 Polarization: 5.34 SS G_CDS: -2.57 Total: 2.77 kcal Atomic # 8 Polarization: -8.55 SS G_CDS: -3.55 Total: -12.09 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 2.17 Total: 0.60 kcal Atomic # 14 Polarization: -4.83 SS G_CDS: 2.04 Total: -2.79 kcal Atomic # 35 Polarization: -0.54 SS G_CDS: -0.68 Total: -1.22 kcal Total: -31.60 1.34 -30.26 kcal The number of atoms in the molecule is 46 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17317796_6201210.mol2 46 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.150 kcal (2) G-P(sol) polarization free energy of solvation -31.596 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -225.746 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.340 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.256 kcal (6) G-S(sol) free energy of system = (1) + (5) -224.406 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.37 seconds