Wall clock time and date at job start Sun Mar 7 2021 07:02:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42907 * 113.99527 * 2 1 4 4 C 1.53002 * 112.85191 * 294.01302 * 3 2 1 5 5 F 1.39890 * 109.47163 * 195.89367 * 4 3 2 6 6 F 1.39898 * 109.47069 * 315.89760 * 4 3 2 7 7 F 1.39897 * 109.46837 * 75.89052 * 4 3 2 8 8 C 1.53783 * 113.68563 * 162.74833 * 3 2 1 9 9 C 1.53785 * 87.08116 * 270.87241 * 8 3 2 10 10 H 1.08995 * 113.69170 * 220.01422 * 9 8 3 11 11 C 1.52995 * 113.61370 * 89.11513 * 9 8 3 12 12 N 1.46506 * 109.46863 * 87.50423 * 11 9 8 13 13 C 1.34782 * 119.99756 * 179.97438 * 12 11 9 14 14 O 1.21280 * 120.00136 * 0.02562 * 13 12 11 15 15 C 1.50696 * 119.99618 * 180.02562 * 13 12 11 16 16 N 1.46503 * 109.47188 * 180.02562 * 15 13 12 17 17 C 1.36827 * 125.05879 * 264.97612 * 16 15 13 18 18 C 1.34243 * 109.93469 * 179.97438 * 17 16 15 19 19 C 1.50703 * 126.49823 * 179.97438 * 18 17 16 20 20 O 1.42895 * 109.47222 * 255.02463 * 19 18 17 21 21 Si 1.86295 * 109.47189 * 15.02835 * 19 18 17 22 22 C 1.46490 * 106.99846 * 0.24075 * 18 17 16 23 23 C 1.39592 * 134.03480 * 180.41808 * 22 18 17 24 24 C 1.36658 * 119.76581 * 179.61341 * 23 22 18 25 25 C 1.38787 * 120.52857 * 359.76704 * 24 23 22 26 26 C 1.37794 * 120.66332 * 359.97438 * 25 24 23 27 27 C 1.37695 * 125.06144 * 84.97039 * 16 15 13 28 28 C 1.53780 * 113.61300 * 65.21552 * 3 2 1 29 29 H 1.09002 * 109.46398 * 184.83596 * 1 2 3 30 30 H 1.08996 * 109.46760 * 304.83765 * 1 2 3 31 31 H 1.08996 * 109.46968 * 64.84241 * 1 2 3 32 32 H 1.08998 * 113.61126 * 156.32921 * 8 3 2 33 33 H 1.09000 * 113.61834 * 25.42204 * 8 3 2 34 34 H 1.09003 * 109.47561 * 327.50628 * 11 9 8 35 35 H 1.08993 * 109.47677 * 207.50477 * 11 9 8 36 36 H 0.96999 * 119.99791 * 0.02562 * 12 11 9 37 37 H 1.08995 * 109.47677 * 60.00045 * 15 13 12 38 38 H 1.09007 * 109.47069 * 299.99807 * 15 13 12 39 39 H 1.07997 * 125.03968 * 0.02562 * 17 16 15 40 40 H 1.08999 * 109.46773 * 135.02878 * 19 18 17 41 41 H 0.96703 * 113.99992 * 60.00616 * 20 19 18 42 42 H 1.48502 * 110.00235 * 58.67972 * 21 19 18 43 43 H 1.48498 * 110.00109 * 179.97438 * 21 19 18 44 44 H 1.08004 * 120.11901 * 359.36388 * 23 22 18 45 45 H 1.08004 * 119.73914 * 179.74650 * 24 23 22 46 46 H 1.08001 * 119.66734 * 179.97438 * 25 24 23 47 47 H 1.08005 * 120.10725 * 180.02562 * 26 25 24 48 48 H 1.09003 * 113.61199 * 334.64276 * 28 3 2 49 49 H 1.09000 * 113.61295 * 203.74489 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 6 1.7277 2.0817 -1.2879 5 9 2.6015 3.1705 -1.3774 6 9 1.9159 1.2408 -2.3900 7 9 0.4071 2.5434 -1.2739 8 6 3.4901 1.3230 0.4177 9 6 2.9982 1.4841 1.8658 10 1 3.5936 2.1809 2.4556 11 6 2.7567 0.1542 2.5825 12 7 4.0032 -0.2981 3.2055 13 6 4.0299 -1.4547 3.8970 14 8 3.0222 -2.1212 4.0032 15 6 5.3119 -1.9197 4.5383 16 7 5.0808 -3.1932 5.2245 17 6 4.7841 -3.3274 6.5535 18 6 4.6331 -4.6256 6.8600 19 6 4.3028 -5.1940 8.2161 20 8 5.4756 -5.7781 8.7863 21 14 3.6846 -3.8318 9.3265 22 6 4.8568 -5.3854 5.6276 23 6 4.8329 -6.7439 5.3074 24 6 5.0850 -7.1432 4.0250 25 6 5.3600 -6.2084 3.0367 26 6 5.3833 -4.8622 3.3297 27 6 5.1298 -4.4334 4.6282 28 6 1.7211 2.1085 1.2793 29 1 -0.3632 -1.0241 0.0866 30 1 -0.3633 0.5870 0.8435 31 1 -0.3633 0.4369 -0.9302 32 1 4.0390 2.1876 0.0443 33 1 4.0068 0.3809 0.2343 34 1 2.4194 -0.5909 1.8620 35 1 1.9947 0.2882 3.3502 36 1 4.8090 0.2352 3.1209 37 1 5.6491 -1.1744 5.2586 38 1 6.0742 -2.0541 3.7707 39 1 4.6851 -2.5099 7.2523 40 1 3.5309 -5.9565 8.1121 41 1 6.2057 -5.1556 8.9080 42 1 2.4835 -3.1951 8.7289 43 1 3.3548 -4.3795 10.6668 44 1 4.6200 -7.4771 6.0713 45 1 5.0705 -8.1946 3.7786 46 1 5.5576 -6.5394 2.0279 47 1 5.5979 -4.1424 2.5536 48 1 0.8095 1.8005 1.7914 49 1 1.7863 3.1878 1.1414 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17317796_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:38 Heat of formation + Delta-G solvation = -153.354783 kcal Electronic energy + Delta-G solvation = -38356.638743 eV Core-core repulsion = 32837.798801 eV Total energy + Delta-G solvation = -5518.839942 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.149 amu Computer time = 1.38 seconds Orbital eigenvalues (eV) -51.22770 -48.77752 -48.65732 -42.47840 -41.75773 -40.41492 -37.99686 -37.65985 -37.41175 -35.47476 -34.03620 -31.55732 -30.46050 -30.10312 -28.98655 -28.29066 -27.11702 -26.93213 -25.49102 -23.67559 -23.41993 -22.57242 -21.76381 -20.86364 -20.51489 -19.82403 -19.51586 -19.33269 -18.54430 -18.41471 -17.70412 -17.41186 -17.32195 -16.77401 -16.63561 -16.52202 -16.31209 -15.98502 -15.80014 -15.67657 -15.55968 -15.43387 -15.35110 -15.23216 -15.07325 -14.84450 -14.80090 -14.66042 -14.60347 -14.48686 -14.32153 -14.16790 -13.91677 -13.65504 -13.48058 -13.35799 -13.09823 -12.86080 -12.58039 -12.45077 -12.39392 -12.28559 -12.10977 -12.00376 -11.86211 -11.66633 -11.14642 -10.98042 -10.41173 -10.25003 -10.21737 -9.01381 -8.51759 -5.02608 0.28856 0.80334 1.37874 1.39731 1.43848 1.49089 1.66933 1.78628 1.93654 2.06652 2.07229 2.48167 2.55714 2.74025 3.05907 3.13612 3.24689 3.33983 3.45020 3.49198 3.55549 3.66295 3.76290 3.81764 3.86860 4.00061 4.04685 4.07874 4.14170 4.18261 4.26030 4.32498 4.38280 4.39841 4.47831 4.50224 4.58850 4.61005 4.62211 4.72489 4.80522 4.89949 4.91418 4.99662 5.17903 5.26592 5.57211 5.65802 5.81842 5.87277 5.90936 6.13826 6.31430 6.37518 6.76346 6.99582 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.330 6.330 3 C 0.041 3.959 4 C 0.436 3.564 5 F -0.176 7.176 6 F -0.174 7.174 7 F -0.181 7.181 8 C -0.115 4.115 9 C -0.112 4.112 10 H 0.102 0.898 11 C 0.130 3.870 12 N -0.727 5.727 13 C 0.490 3.510 14 O -0.512 6.512 15 C 0.092 3.908 16 N -0.466 5.466 17 C 0.069 3.931 18 C -0.198 4.198 19 C -0.028 4.028 20 O -0.542 6.542 21 Si 0.682 3.318 22 C -0.087 4.087 23 C -0.066 4.066 24 C -0.146 4.146 25 C -0.097 4.097 26 C -0.127 4.127 27 C 0.109 3.891 28 C -0.144 4.144 29 H 0.102 0.898 30 H 0.056 0.944 31 H 0.053 0.947 32 H 0.116 0.884 33 H 0.097 0.903 34 H 0.091 0.909 35 H 0.072 0.928 36 H 0.402 0.598 37 H 0.124 0.876 38 H 0.118 0.882 39 H 0.171 0.829 40 H 0.111 0.889 41 H 0.376 0.624 42 H -0.256 1.256 43 H -0.255 1.255 44 H 0.122 0.878 45 H 0.122 0.878 46 H 0.125 0.875 47 H 0.115 0.885 48 H 0.095 0.905 49 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.348 6.867 0.849 8.172 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.084 4.084 2 O -0.248 6.248 3 C -0.002 4.002 4 C 0.381 3.619 5 F -0.157 7.157 6 F -0.155 7.155 7 F -0.163 7.163 8 C -0.152 4.152 9 C -0.131 4.131 10 H 0.120 0.880 11 C 0.007 3.993 12 N -0.381 5.381 13 C 0.274 3.726 14 O -0.386 6.386 15 C -0.034 4.034 16 N -0.149 5.149 17 C -0.056 4.056 18 C -0.205 4.205 19 C -0.140 4.140 20 O -0.347 6.347 21 Si 0.584 3.416 22 C -0.091 4.091 23 C -0.085 4.085 24 C -0.165 4.165 25 C -0.116 4.116 26 C -0.148 4.148 27 C 0.005 3.995 28 C -0.182 4.182 29 H 0.121 0.879 30 H 0.074 0.926 31 H 0.072 0.928 32 H 0.134 0.866 33 H 0.116 0.884 34 H 0.109 0.891 35 H 0.091 0.909 36 H 0.236 0.764 37 H 0.142 0.858 38 H 0.136 0.864 39 H 0.188 0.812 40 H 0.128 0.872 41 H 0.223 0.777 42 H -0.181 1.181 43 H -0.179 1.179 44 H 0.140 0.860 45 H 0.140 0.860 46 H 0.143 0.857 47 H 0.133 0.867 48 H 0.114 0.886 49 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 2.680 6.278 1.242 6.939 hybrid contribution -0.238 0.377 -1.078 1.167 sum 2.442 6.656 0.164 7.091 Atomic orbital electron populations 1.23142 0.79333 1.04487 1.01477 1.88109 1.21254 1.21616 1.93793 1.23968 0.99832 0.86520 0.89892 1.21201 0.74338 0.78691 0.87627 1.93173 1.69386 1.56528 1.96616 1.93223 1.94783 1.70836 1.56686 1.93196 1.36568 1.89668 1.96842 1.23294 0.91269 1.05517 0.95125 1.22409 0.97758 0.97293 0.95648 0.87989 1.21330 0.86146 0.94665 0.97159 1.45890 1.13637 1.23690 1.54893 1.21011 0.91076 0.81196 0.79362 1.90827 1.34939 1.54235 1.58613 1.21584 0.96159 0.86138 0.99524 1.43198 1.60780 1.03662 1.07306 1.21499 1.02423 0.97351 0.84334 1.20633 1.12443 0.92070 0.95389 1.24327 0.91677 1.04751 0.93244 1.86503 1.24543 1.40131 1.83514 0.95424 0.85275 0.82054 0.78845 1.18943 1.05016 0.92897 0.92242 1.20306 0.98104 0.93605 0.96462 1.20670 1.03160 0.99625 0.93007 1.20828 0.99507 0.91891 0.99367 1.19956 1.05816 0.96220 0.92783 1.18156 1.03258 0.83718 0.94403 1.23582 0.99846 1.00969 0.93809 0.87923 0.92572 0.92844 0.86601 0.88418 0.89103 0.90937 0.76360 0.85820 0.86398 0.81221 0.87196 0.77724 1.18086 1.17946 0.86000 0.85952 0.85726 0.86720 0.88614 0.87150 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 101.05 1.04 1.03 16 2 O -0.33 -0.03 8.37 -35.23 -0.29 -0.33 16 3 C 0.04 -0.06 0.84 -89.81 -0.08 -0.13 16 4 C 0.44 0.18 2.52 37.16 0.09 0.27 16 5 F -0.18 -0.04 15.81 2.25 0.04 0.00 16 6 F -0.17 -0.41 17.10 2.25 0.04 -0.38 16 7 F -0.18 -0.18 15.39 2.25 0.03 -0.15 16 8 C -0.11 0.40 6.89 -25.92 -0.18 0.22 16 9 C -0.11 0.50 3.94 -89.81 -0.35 0.14 16 10 H 0.10 -0.63 8.14 -51.93 -0.42 -1.06 16 11 C 0.13 -0.29 5.26 -4.04 -0.02 -0.31 16 12 N -0.73 2.49 5.56 -60.29 -0.33 2.16 16 13 C 0.49 -0.18 7.90 -10.98 -0.09 -0.27 16 14 O -0.51 -2.65 16.42 5.56 0.09 -2.56 16 15 C 0.09 -0.28 6.48 -5.19 -0.03 -0.31 16 16 N -0.47 -0.43 2.27 -115.71 -0.26 -0.69 16 17 C 0.07 0.03 9.89 -16.73 -0.17 -0.13 16 18 C -0.20 -0.46 5.58 -102.71 -0.57 -1.04 16 19 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 20 O -0.54 -0.83 12.88 -35.23 -0.45 -1.29 16 21 Si 0.68 -0.20 30.75 -169.99 -5.23 -5.43 16 22 C -0.09 -0.37 6.35 -105.14 -0.67 -1.04 16 23 C -0.07 -0.26 10.05 -39.65 -0.40 -0.66 16 24 C -0.15 -0.42 9.97 -39.95 -0.40 -0.82 16 25 C -0.10 -0.23 10.01 -39.54 -0.40 -0.63 16 26 C -0.13 -0.34 10.00 -39.43 -0.39 -0.73 16 27 C 0.11 0.37 6.80 -83.99 -0.57 -0.20 16 28 C -0.14 0.50 6.51 -25.92 -0.17 0.33 16 29 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 30 H 0.06 -0.14 6.55 -51.93 -0.34 -0.48 16 31 H 0.05 -0.04 6.69 -51.93 -0.35 -0.38 16 32 H 0.12 -0.51 7.02 -51.93 -0.36 -0.88 16 33 H 0.10 -0.30 8.10 -51.93 -0.42 -0.72 16 34 H 0.09 0.02 6.13 -51.93 -0.32 -0.30 16 35 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 36 H 0.40 -2.74 8.47 -40.82 -0.35 -3.09 16 37 H 0.12 -0.83 8.12 -51.93 -0.42 -1.25 16 38 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 39 H 0.17 -0.55 6.34 -52.49 -0.33 -0.88 16 40 H 0.11 0.28 7.96 -51.93 -0.41 -0.14 16 41 H 0.38 -0.98 8.70 45.56 0.40 -0.59 16 42 H -0.26 -0.70 7.11 56.52 0.40 -0.30 16 43 H -0.25 -0.73 7.11 56.52 0.40 -0.33 16 44 H 0.12 0.37 8.06 -52.48 -0.42 -0.05 16 45 H 0.12 0.12 8.06 -52.48 -0.42 -0.31 16 46 H 0.12 0.03 8.06 -52.49 -0.42 -0.39 16 47 H 0.11 0.08 8.06 -52.48 -0.42 -0.34 16 48 H 0.10 -0.34 6.63 -51.93 -0.34 -0.69 16 49 H 0.11 -0.47 8.04 -51.93 -0.42 -0.89 16 LS Contribution 414.66 15.07 6.25 6.25 Total: 0.00 -12.19 414.66 -9.61 -21.81 By element: Atomic # 1 Polarization: -8.94 SS G_CDS: -6.25 Total: -15.19 kcal Atomic # 6 Polarization: -0.97 SS G_CDS: -3.24 Total: -4.21 kcal Atomic # 7 Polarization: 2.06 SS G_CDS: -0.60 Total: 1.46 kcal Atomic # 8 Polarization: -3.51 SS G_CDS: -0.66 Total: -4.17 kcal Atomic # 9 Polarization: -0.63 SS G_CDS: 0.11 Total: -0.52 kcal Atomic # 14 Polarization: -0.20 SS G_CDS: -5.23 Total: -5.43 kcal Total LS contribution 6.25 Total: 6.25 kcal Total: -12.19 -9.61 -21.81 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17317796_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -131.548 kcal (2) G-P(sol) polarization free energy of solvation -12.194 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -143.742 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.613 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.807 kcal (6) G-S(sol) free energy of system = (1) + (5) -153.355 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.38 seconds