Wall clock time and date at job start Sun Mar 7 2021 07:02:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42907 * 1 3 3 C 1.42907 * 113.99527 * 2 1 4 4 C 1.53002 * 112.85191 * 294.01302 * 3 2 1 5 5 F 1.39890 * 109.47163 * 195.89367 * 4 3 2 6 6 F 1.39898 * 109.47069 * 315.89760 * 4 3 2 7 7 F 1.39897 * 109.46837 * 75.89052 * 4 3 2 8 8 C 1.53783 * 113.68563 * 162.74833 * 3 2 1 9 9 C 1.53785 * 87.08116 * 270.87241 * 8 3 2 10 10 H 1.08995 * 113.69170 * 220.01422 * 9 8 3 11 11 C 1.52995 * 113.61370 * 89.11513 * 9 8 3 12 12 N 1.46506 * 109.46863 * 87.50423 * 11 9 8 13 13 C 1.34782 * 119.99756 * 179.97438 * 12 11 9 14 14 O 1.21280 * 120.00136 * 0.02562 * 13 12 11 15 15 C 1.50696 * 119.99618 * 180.02562 * 13 12 11 16 16 N 1.46503 * 109.47188 * 180.02562 * 15 13 12 17 17 C 1.36827 * 125.05879 * 264.97612 * 16 15 13 18 18 C 1.34243 * 109.93469 * 179.97438 * 17 16 15 19 19 C 1.50703 * 126.49823 * 179.97438 * 18 17 16 20 20 O 1.42895 * 109.47222 * 255.02463 * 19 18 17 21 21 Si 1.86295 * 109.47189 * 15.02835 * 19 18 17 22 22 C 1.46490 * 106.99846 * 0.24075 * 18 17 16 23 23 C 1.39592 * 134.03480 * 180.41808 * 22 18 17 24 24 C 1.36658 * 119.76581 * 179.61341 * 23 22 18 25 25 C 1.38787 * 120.52857 * 359.76704 * 24 23 22 26 26 C 1.37794 * 120.66332 * 359.97438 * 25 24 23 27 27 C 1.37695 * 125.06144 * 84.97039 * 16 15 13 28 28 C 1.53780 * 113.61300 * 65.21552 * 3 2 1 29 29 H 1.09002 * 109.46398 * 184.83596 * 1 2 3 30 30 H 1.08996 * 109.46760 * 304.83765 * 1 2 3 31 31 H 1.08996 * 109.46968 * 64.84241 * 1 2 3 32 32 H 1.08998 * 113.61126 * 156.32921 * 8 3 2 33 33 H 1.09000 * 113.61834 * 25.42204 * 8 3 2 34 34 H 1.09003 * 109.47561 * 327.50628 * 11 9 8 35 35 H 1.08993 * 109.47677 * 207.50477 * 11 9 8 36 36 H 0.96999 * 119.99791 * 0.02562 * 12 11 9 37 37 H 1.08995 * 109.47677 * 60.00045 * 15 13 12 38 38 H 1.09007 * 109.47069 * 299.99807 * 15 13 12 39 39 H 1.07997 * 125.03968 * 0.02562 * 17 16 15 40 40 H 1.08999 * 109.46773 * 135.02878 * 19 18 17 41 41 H 0.96703 * 113.99992 * 60.00616 * 20 19 18 42 42 H 1.48502 * 110.00235 * 58.67972 * 21 19 18 43 43 H 1.48498 * 110.00109 * 179.97438 * 21 19 18 44 44 H 1.08004 * 120.11901 * 359.36388 * 23 22 18 45 45 H 1.08004 * 119.73914 * 179.74650 * 24 23 22 46 46 H 1.08001 * 119.66734 * 179.97438 * 25 24 23 47 47 H 1.08005 * 120.10725 * 180.02562 * 26 25 24 48 48 H 1.09003 * 113.61199 * 334.64276 * 28 3 2 49 49 H 1.09000 * 113.61295 * 203.74489 * 28 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0102 1.3056 0.0000 4 6 1.7277 2.0817 -1.2879 5 9 2.6015 3.1705 -1.3774 6 9 1.9159 1.2408 -2.3900 7 9 0.4071 2.5434 -1.2739 8 6 3.4901 1.3230 0.4177 9 6 2.9982 1.4841 1.8658 10 1 3.5936 2.1809 2.4556 11 6 2.7567 0.1542 2.5825 12 7 4.0032 -0.2981 3.2055 13 6 4.0299 -1.4547 3.8970 14 8 3.0222 -2.1212 4.0032 15 6 5.3119 -1.9197 4.5383 16 7 5.0808 -3.1932 5.2245 17 6 4.7841 -3.3274 6.5535 18 6 4.6331 -4.6256 6.8600 19 6 4.3028 -5.1940 8.2161 20 8 5.4756 -5.7781 8.7863 21 14 3.6846 -3.8318 9.3265 22 6 4.8568 -5.3854 5.6276 23 6 4.8329 -6.7439 5.3074 24 6 5.0850 -7.1432 4.0250 25 6 5.3600 -6.2084 3.0367 26 6 5.3833 -4.8622 3.3297 27 6 5.1298 -4.4334 4.6282 28 6 1.7211 2.1085 1.2793 29 1 -0.3632 -1.0241 0.0866 30 1 -0.3633 0.5870 0.8435 31 1 -0.3633 0.4369 -0.9302 32 1 4.0390 2.1876 0.0443 33 1 4.0068 0.3809 0.2343 34 1 2.4194 -0.5909 1.8620 35 1 1.9947 0.2882 3.3502 36 1 4.8090 0.2352 3.1209 37 1 5.6491 -1.1744 5.2586 38 1 6.0742 -2.0541 3.7707 39 1 4.6851 -2.5099 7.2523 40 1 3.5309 -5.9565 8.1121 41 1 6.2057 -5.1556 8.9080 42 1 2.4835 -3.1951 8.7289 43 1 3.3548 -4.3795 10.6668 44 1 4.6200 -7.4771 6.0713 45 1 5.0705 -8.1946 3.7786 46 1 5.5576 -6.5394 2.0279 47 1 5.5979 -4.1424 2.5536 48 1 0.8095 1.8005 1.7914 49 1 1.7863 3.1878 1.1414 There are 73 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 73 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17317796_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 07:02:36 Heat of formation + Delta-G solvation = -155.098035 kcal Electronic energy + Delta-G solvation = -38356.714336 eV Core-core repulsion = 32837.798801 eV Total energy + Delta-G solvation = -5518.915535 eV No. of doubly occupied orbitals = 73 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 399.149 amu Computer time = 1.46 seconds Orbital eigenvalues (eV) -51.26452 -48.79722 -48.74227 -42.51403 -41.57426 -40.37999 -38.09898 -37.65464 -37.36700 -35.38465 -34.04133 -31.60600 -30.40102 -30.21140 -28.93159 -28.16282 -26.99993 -26.74634 -25.49609 -23.75609 -23.33532 -22.65091 -21.69166 -20.77935 -20.50390 -19.77057 -19.55281 -19.27631 -18.54194 -18.29668 -17.73634 -17.30308 -17.24204 -16.70018 -16.54380 -16.45937 -16.41768 -16.02898 -15.77271 -15.67478 -15.60972 -15.41930 -15.37129 -15.22661 -15.09766 -14.91116 -14.84792 -14.74051 -14.65272 -14.46979 -14.23034 -14.04803 -14.02142 -13.63715 -13.26109 -13.16178 -12.96540 -12.71947 -12.70102 -12.57356 -12.25428 -12.19832 -12.11326 -12.01668 -11.81327 -11.64600 -11.14431 -10.87979 -10.54184 -10.29679 -10.12507 -9.14984 -8.61318 -5.04451 0.14846 0.63585 1.35533 1.44448 1.51204 1.53900 1.65951 1.77373 2.01267 2.08969 2.22180 2.58190 2.64493 2.90335 2.95022 3.31158 3.34892 3.48802 3.61729 3.69735 3.71225 3.72497 3.81738 3.89913 4.06478 4.17960 4.20061 4.22196 4.22897 4.31071 4.36595 4.45374 4.49373 4.52902 4.56616 4.62665 4.68728 4.72398 4.76377 4.79359 4.81878 4.85648 4.89001 5.12540 5.13698 5.38394 5.50686 5.66068 5.70739 5.73644 5.76121 6.21532 6.25311 6.52238 6.90556 7.19185 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.008 3.992 2 O -0.346 6.346 3 C 0.029 3.971 4 C 0.430 3.570 5 F -0.174 7.174 6 F -0.190 7.190 7 F -0.188 7.188 8 C -0.110 4.110 9 C -0.095 4.095 10 H 0.133 0.867 11 C 0.132 3.868 12 N -0.707 5.707 13 C 0.488 3.512 14 O -0.577 6.577 15 C 0.088 3.912 16 N -0.466 5.466 17 C 0.081 3.919 18 C -0.227 4.227 19 C -0.042 4.042 20 O -0.560 6.560 21 Si 0.805 3.195 22 C -0.118 4.118 23 C -0.092 4.092 24 C -0.154 4.154 25 C -0.110 4.110 26 C -0.132 4.132 27 C 0.091 3.909 28 C -0.141 4.141 29 H 0.103 0.897 30 H 0.068 0.932 31 H 0.045 0.955 32 H 0.130 0.870 33 H 0.093 0.907 34 H 0.064 0.936 35 H 0.061 0.939 36 H 0.422 0.578 37 H 0.171 0.829 38 H 0.144 0.856 39 H 0.210 0.790 40 H 0.086 0.914 41 H 0.394 0.606 42 H -0.294 1.294 43 H -0.299 1.299 44 H 0.116 0.884 45 H 0.135 0.865 46 H 0.144 0.856 47 H 0.133 0.867 48 H 0.095 0.905 49 H 0.124 0.876 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.152 9.649 1.351 11.523 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.087 4.087 2 O -0.264 6.264 3 C -0.013 4.013 4 C 0.376 3.624 5 F -0.155 7.155 6 F -0.172 7.172 7 F -0.169 7.169 8 C -0.147 4.147 9 C -0.113 4.113 10 H 0.151 0.849 11 C 0.008 3.992 12 N -0.361 5.361 13 C 0.274 3.726 14 O -0.456 6.456 15 C -0.036 4.036 16 N -0.148 5.148 17 C -0.044 4.044 18 C -0.234 4.234 19 C -0.151 4.151 20 O -0.368 6.368 21 Si 0.710 3.290 22 C -0.122 4.122 23 C -0.111 4.111 24 C -0.173 4.173 25 C -0.129 4.129 26 C -0.153 4.153 27 C -0.014 4.014 28 C -0.179 4.179 29 H 0.122 0.878 30 H 0.086 0.914 31 H 0.064 0.936 32 H 0.148 0.852 33 H 0.112 0.888 34 H 0.082 0.918 35 H 0.079 0.921 36 H 0.261 0.739 37 H 0.189 0.811 38 H 0.161 0.839 39 H 0.226 0.774 40 H 0.104 0.896 41 H 0.243 0.757 42 H -0.222 1.222 43 H -0.227 1.227 44 H 0.134 0.866 45 H 0.152 0.848 46 H 0.162 0.838 47 H 0.151 0.849 48 H 0.113 0.887 49 H 0.142 0.858 Dipole moment (debyes) X Y Z Total from point charges 4.562 9.103 1.700 10.323 hybrid contribution -0.841 -0.484 -1.299 1.621 sum 3.722 8.619 0.401 9.397 Atomic orbital electron populations 1.23188 0.79182 1.04788 1.01562 1.88091 1.21652 1.22857 1.93812 1.24318 1.01411 0.86080 0.89508 1.21623 0.74072 0.78764 0.87970 1.93166 1.69256 1.56481 1.96641 1.93184 1.94860 1.71372 1.57765 1.93177 1.37125 1.89761 1.96868 1.23381 0.89915 1.05936 0.95481 1.22293 0.97450 0.96400 0.95191 0.84865 1.21194 0.86439 0.95149 0.96391 1.45727 1.14118 1.22961 1.53313 1.21511 0.91124 0.81091 0.78884 1.90815 1.37333 1.56232 1.61180 1.22027 0.95049 0.85327 1.01190 1.43460 1.59741 1.04187 1.07445 1.22083 0.99896 0.97625 0.84793 1.20790 1.14490 0.92948 0.95187 1.24594 0.91358 1.05154 0.94040 1.86452 1.25332 1.41575 1.83472 0.94127 0.82047 0.78805 0.74016 1.19376 1.05593 0.93392 0.93840 1.20441 0.99601 0.94017 0.96992 1.20900 1.02973 1.00566 0.92888 1.21120 0.99608 0.92020 1.00143 1.20247 1.05218 0.96707 0.93110 1.18374 1.03611 0.84917 0.94530 1.23659 1.00408 1.01456 0.92379 0.87826 0.91387 0.93614 0.85165 0.88834 0.91784 0.92087 0.73939 0.81135 0.83880 0.77367 0.89597 0.75675 1.22182 1.22694 0.86644 0.84753 0.83808 0.84900 0.88701 0.85827 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.30 113.37 1.17 1.16 16 2 O -0.35 -0.40 8.37 -148.98 -1.25 -1.64 16 3 C 0.03 -0.09 0.84 -10.27 -0.01 -0.10 16 4 C 0.43 0.47 2.52 71.98 0.18 0.65 16 5 F -0.17 0.02 15.81 44.97 0.71 0.73 16 6 F -0.19 -1.10 17.10 44.97 0.77 -0.33 16 7 F -0.19 -0.48 15.39 44.97 0.69 0.21 16 8 C -0.11 0.92 6.89 31.12 0.21 1.13 16 9 C -0.09 1.03 3.94 -10.27 -0.04 0.99 16 10 H 0.13 -2.19 8.14 -2.39 -0.02 -2.21 16 11 C 0.13 -0.69 5.26 86.38 0.45 -0.23 16 12 N -0.71 6.23 5.56 -463.06 -2.57 3.66 16 13 C 0.49 -1.00 7.90 87.65 0.69 -0.31 16 14 O -0.58 -6.31 16.42 -3.03 -0.05 -6.36 16 15 C 0.09 -0.78 6.48 85.63 0.55 -0.22 16 16 N -0.47 -0.35 2.27 -520.00 -1.18 -1.53 16 17 C 0.08 -0.01 9.89 83.00 0.82 0.81 16 18 C -0.23 -1.27 5.58 -18.62 -0.10 -1.37 16 19 C -0.04 -0.18 3.06 71.24 0.22 0.04 16 20 O -0.56 -2.31 12.88 -148.98 -1.92 -4.23 16 21 Si 0.80 -0.62 30.75 68.60 2.11 1.49 16 22 C -0.12 -1.23 6.35 -20.20 -0.13 -1.36 16 23 C -0.09 -0.98 10.05 22.23 0.22 -0.76 16 24 C -0.15 -1.20 9.97 22.03 0.22 -0.98 16 25 C -0.11 -0.64 10.01 22.30 0.22 -0.42 16 26 C -0.13 -0.76 10.00 22.37 0.22 -0.54 16 27 C 0.09 0.67 6.80 39.03 0.27 0.93 16 28 C -0.14 1.15 6.51 31.12 0.20 1.35 16 29 H 0.10 -0.20 8.14 -2.39 -0.02 -0.22 16 30 H 0.07 -0.27 6.55 -2.39 -0.02 -0.29 16 31 H 0.05 0.01 6.69 -2.39 -0.02 -0.01 16 32 H 0.13 -1.44 7.02 -2.39 -0.02 -1.45 16 33 H 0.09 -0.67 8.10 -2.39 -0.02 -0.69 16 34 H 0.06 0.07 6.13 -2.39 -0.01 0.06 16 35 H 0.06 -0.14 8.14 -2.39 -0.02 -0.16 16 36 H 0.42 -7.21 8.47 -92.71 -0.79 -7.99 16 37 H 0.17 -3.11 8.12 -2.39 -0.02 -3.13 16 38 H 0.14 -1.94 8.14 -2.38 -0.02 -1.96 16 39 H 0.21 -1.95 6.34 -2.91 -0.02 -1.97 16 40 H 0.09 0.69 7.96 -2.39 -0.02 0.67 16 41 H 0.39 -2.05 8.70 -74.05 -0.64 -2.69 16 42 H -0.29 -1.64 7.11 99.48 0.71 -0.94 16 43 H -0.30 -1.92 7.11 99.48 0.71 -1.22 16 44 H 0.12 1.16 8.06 -2.91 -0.02 1.13 16 45 H 0.13 0.51 8.06 -2.91 -0.02 0.48 16 46 H 0.14 0.11 8.06 -2.91 -0.02 0.09 16 47 H 0.13 0.11 8.06 -2.91 -0.02 0.09 16 48 H 0.09 -0.73 6.63 -2.39 -0.02 -0.74 16 49 H 0.12 -1.29 8.04 -2.39 -0.02 -1.31 16 Total: 0.00 -34.02 414.66 2.33 -31.69 By element: Atomic # 1 Polarization: -24.10 SS G_CDS: -0.36 Total: -24.46 kcal Atomic # 6 Polarization: -4.60 SS G_CDS: 5.38 Total: 0.78 kcal Atomic # 7 Polarization: 5.88 SS G_CDS: -3.75 Total: 2.12 kcal Atomic # 8 Polarization: -9.02 SS G_CDS: -3.22 Total: -12.23 kcal Atomic # 9 Polarization: -1.57 SS G_CDS: 2.17 Total: 0.61 kcal Atomic # 14 Polarization: -0.62 SS G_CDS: 2.11 Total: 1.49 kcal Total: -34.02 2.33 -31.69 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17317796_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -123.408 kcal (2) G-P(sol) polarization free energy of solvation -34.023 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -157.431 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -31.690 kcal (6) G-S(sol) free energy of system = (1) + (5) -155.098 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.46 seconds