Wall clock time and date at job start Sun Mar 7 2021 14:24:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45204 * 1 3 3 C 1.34227 * 116.99847 * 2 1 4 4 O 1.20829 * 119.99879 * 359.71974 * 3 2 1 5 5 C 1.50703 * 119.99808 * 180.02562 * 3 2 1 6 6 C 1.53007 * 109.46754 * 179.72013 * 5 3 2 7 7 H 1.09000 * 112.84880 * 314.66662 * 6 5 3 8 8 C 1.53780 * 113.61226 * 85.86341 * 6 5 3 9 9 C 1.53950 * 87.01861 * 139.94968 * 8 6 5 10 10 H 1.09003 * 113.53832 * 89.19102 * 9 8 6 11 11 N 1.46504 * 113.74359 * 220.05319 * 9 8 6 12 12 C 1.34771 * 120.00303 * 252.60042 * 11 9 8 13 13 O 1.21284 * 120.00092 * 359.97438 * 12 11 9 14 14 C 1.50700 * 120.00137 * 179.97438 * 12 11 9 15 15 C 1.53001 * 109.47272 * 300.00086 * 14 12 11 16 16 O 1.42906 * 109.47239 * 179.97438 * 14 12 11 17 17 C 1.35898 * 116.99758 * 204.91480 * 16 14 12 18 18 C 1.38738 * 120.05207 * 174.25248 * 17 16 14 19 19 C 1.38148 * 119.94272 * 179.74371 * 18 17 16 20 20 C 1.38262 * 120.05247 * 0.51267 * 19 18 17 21 21 C 1.50707 * 119.94337 * 179.74374 * 20 19 18 22 22 O 1.42898 * 109.46979 * 120.01960 * 21 20 19 23 23 Si 1.86303 * 109.46811 * 0.02562 * 21 20 19 24 24 C 1.38270 * 120.11547 * 359.76756 * 20 19 18 25 25 C 1.38142 * 120.05316 * 359.97438 * 24 20 19 26 26 C 1.53775 * 113.61142 * 183.46601 * 6 5 3 27 27 H 1.08993 * 109.47467 * 300.00398 * 1 2 3 28 28 H 1.08997 * 109.46731 * 60.00537 * 1 2 3 29 29 H 1.09006 * 109.46582 * 180.02562 * 1 2 3 30 30 H 1.08989 * 109.46940 * 299.71709 * 5 3 2 31 31 H 1.08998 * 109.46930 * 59.72285 * 5 3 2 32 32 H 1.08999 * 113.61695 * 254.53038 * 8 6 5 33 33 H 1.09007 * 113.61748 * 25.42904 * 8 6 5 34 34 H 0.97009 * 119.99757 * 72.59520 * 11 9 8 35 35 H 1.09004 * 109.47113 * 59.99909 * 14 12 11 36 36 H 1.08996 * 109.46804 * 59.99323 * 15 14 12 37 37 H 1.08990 * 109.47099 * 180.02562 * 15 14 12 38 38 H 1.09006 * 109.46463 * 299.99670 * 15 14 12 39 39 H 1.07997 * 120.02686 * 359.97438 * 18 17 16 40 40 H 1.07995 * 119.96965 * 180.28000 * 19 18 17 41 41 H 1.09001 * 109.47120 * 240.02534 * 21 20 19 42 42 H 0.96699 * 114.00095 * 300.00068 * 22 21 20 43 43 H 1.48496 * 109.99970 * 58.68256 * 23 21 20 44 44 H 1.48500 * 109.99939 * 180.02562 * 23 21 20 45 45 H 1.08001 * 119.97212 * 179.97438 * 24 20 19 46 46 H 1.08002 * 120.02278 * 180.02562 * 25 24 20 47 47 H 1.09001 * 113.61593 * 334.57201 * 26 6 5 48 48 H 1.09004 * 113.61297 * 105.47330 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0051 5 6 3.5664 1.2749 -0.0006 6 6 4.0001 2.7421 -0.0075 7 1 3.4428 3.3449 -0.7246 8 6 4.0774 3.3682 1.3950 9 6 5.3578 4.0785 0.9195 10 1 5.1718 5.0477 0.4568 11 7 6.4169 4.1249 1.9307 12 6 6.7108 5.2875 2.5459 13 8 6.0989 6.2954 2.2620 14 6 7.7998 5.3351 3.5865 15 6 7.4492 4.3873 4.7354 16 8 7.9215 6.6677 4.0880 17 6 9.1252 7.0230 4.6095 18 6 9.3516 8.3335 5.0046 19 6 10.5741 8.6911 5.5393 20 6 11.5752 7.7465 5.6709 21 6 12.9099 8.1406 6.2492 22 8 13.1647 7.3718 7.4265 23 14 12.8880 9.9522 6.6834 24 6 11.3540 6.4411 5.2725 25 6 10.1314 6.0773 4.7422 26 6 5.5234 2.9337 -0.0938 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5137 -0.8900 29 1 -0.3633 -1.0278 0.0005 30 1 3.9561 0.7850 0.8916 31 1 3.9559 0.7766 -0.8883 32 1 3.2553 4.0492 1.6151 33 1 4.2504 2.6414 2.1887 34 1 6.9065 3.3188 2.1576 35 1 8.7447 5.0283 3.1379 36 1 7.3565 3.3710 4.3525 37 1 8.2365 4.4221 5.4882 38 1 6.5043 4.6942 5.1839 39 1 8.5714 9.0727 4.8977 40 1 10.7493 9.7101 5.8512 41 1 13.6937 7.9523 5.5155 42 1 12.5054 7.4902 8.1239 43 1 11.8030 10.2276 7.6591 44 1 14.1989 10.3536 7.2542 45 1 12.1377 5.7052 5.3760 46 1 9.9591 5.0574 4.4315 47 1 6.0924 2.0879 0.2921 48 1 5.8671 3.2645 -1.0740 There are 65 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 65 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_10157680.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:00 Heat of formation + Delta-G solvation = -133.260612 kcal Electronic energy + Delta-G solvation = -29913.426965 eV Core-core repulsion = 25515.645585 eV Total energy + Delta-G solvation = -4397.781380 eV No. of doubly occupied orbitals = 65 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.165 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.90366 -41.56444 -40.83689 -39.72737 -38.81920 -37.41998 -37.22961 -35.07445 -33.29378 -32.08980 -31.69950 -31.18144 -28.48465 -26.86970 -26.78361 -25.87680 -24.57705 -23.82980 -22.47779 -21.80136 -21.51911 -20.61131 -19.51678 -18.67575 -18.46060 -18.28326 -17.83127 -17.54214 -17.21298 -16.84965 -16.64788 -16.33990 -16.27041 -16.13560 -15.67122 -15.52734 -15.20903 -14.90971 -14.73072 -14.51707 -14.37458 -14.23206 -13.93632 -13.72177 -13.63434 -13.55495 -13.44707 -13.35502 -13.02346 -12.93594 -12.89523 -12.26179 -12.23402 -12.18367 -12.02856 -11.96192 -11.78506 -11.57692 -11.51651 -11.38805 -10.78879 -10.58579 -10.15063 -10.05061 -9.20113 -4.94382 0.23980 0.33929 1.21190 1.30529 1.42437 1.49674 1.61298 1.71586 1.97776 2.45336 2.64980 3.27126 3.29677 3.38017 3.39168 3.53336 3.60883 3.64721 3.70451 3.72809 3.81526 3.83426 3.84734 4.14037 4.14915 4.19396 4.20988 4.24961 4.25431 4.37148 4.39329 4.45044 4.50305 4.57017 4.57648 4.62835 4.64237 4.69985 4.86177 4.87455 4.98140 4.99063 5.14188 5.18190 5.29062 5.38873 5.44399 5.46932 5.65608 6.23028 6.37712 6.41001 6.74374 7.07961 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.124 3.876 10 H 0.119 0.881 11 N -0.716 5.716 12 C 0.519 3.481 13 O -0.510 6.510 14 C 0.066 3.934 15 C -0.178 4.178 16 O -0.283 6.283 17 C 0.136 3.864 18 C -0.142 4.142 19 C -0.075 4.075 20 C -0.156 4.156 21 C -0.069 4.069 22 O -0.531 6.531 23 Si 0.681 3.319 24 C -0.051 4.051 25 C -0.212 4.212 26 C -0.139 4.139 27 H 0.063 0.937 28 H 0.064 0.936 29 H 0.102 0.898 30 H 0.107 0.893 31 H 0.110 0.890 32 H 0.079 0.921 33 H 0.086 0.914 34 H 0.402 0.598 35 H 0.102 0.898 36 H 0.079 0.921 37 H 0.078 0.922 38 H 0.077 0.923 39 H 0.138 0.862 40 H 0.134 0.866 41 H 0.117 0.883 42 H 0.376 0.624 43 H -0.260 1.260 44 H -0.257 1.257 45 H 0.129 0.871 46 H 0.131 0.869 47 H 0.091 0.909 48 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.639 -5.843 -1.815 6.335 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.300 3.700 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.185 4.185 9 C 0.020 3.980 10 H 0.137 0.863 11 N -0.369 5.369 12 C 0.304 3.696 13 O -0.384 6.384 14 C 0.006 3.994 15 C -0.235 4.235 16 O -0.196 6.196 17 C 0.090 3.910 18 C -0.160 4.160 19 C -0.092 4.092 20 C -0.157 4.157 21 C -0.179 4.179 22 O -0.338 6.338 23 Si 0.583 3.417 24 C -0.069 4.069 25 C -0.231 4.231 26 C -0.177 4.177 27 H 0.082 0.918 28 H 0.083 0.917 29 H 0.121 0.879 30 H 0.125 0.875 31 H 0.128 0.872 32 H 0.097 0.903 33 H 0.104 0.896 34 H 0.237 0.763 35 H 0.119 0.881 36 H 0.098 0.902 37 H 0.097 0.903 38 H 0.096 0.904 39 H 0.155 0.845 40 H 0.151 0.849 41 H 0.135 0.865 42 H 0.223 0.777 43 H -0.185 1.185 44 H -0.182 1.182 45 H 0.147 0.853 46 H 0.149 0.851 47 H 0.110 0.890 48 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 1.368 -4.254 -1.750 4.799 hybrid contribution -0.313 -1.436 0.979 1.766 sum 1.055 -5.690 -0.771 5.838 Atomic orbital electron populations 1.23302 0.75915 1.03937 1.02726 1.86504 1.23812 1.33541 1.84090 1.23816 0.92297 0.81405 0.72441 1.90702 1.67226 1.36306 1.44738 1.21401 0.87640 0.98836 1.06087 1.22243 0.96083 0.94133 0.99333 0.87402 1.23594 0.98316 1.00132 0.96491 1.22562 0.86727 0.99990 0.88733 0.86288 1.45844 1.38804 1.10770 1.41509 1.20120 0.83935 0.83807 0.81767 1.90782 1.50853 1.33764 1.62954 1.22209 0.99096 0.83315 0.94798 1.22362 1.04465 0.98576 0.98115 1.86227 1.30086 1.29639 1.73622 1.19089 0.84266 0.93812 0.93829 1.20418 0.98374 0.93905 1.03347 1.20833 0.92122 0.98781 0.97487 1.20191 0.96563 0.94655 1.04288 1.24937 0.96329 1.07385 0.89250 1.86588 1.53430 1.67489 1.26274 0.95026 0.80305 0.77202 0.89216 1.20791 0.96048 0.95572 0.94480 1.21319 0.94716 0.99644 1.07374 1.23428 0.95769 0.98321 1.00188 0.91780 0.91741 0.87912 0.87451 0.87154 0.90262 0.89578 0.76349 0.88093 0.90227 0.90310 0.90435 0.84462 0.84872 0.86497 0.77665 1.18451 1.18231 0.85274 0.85104 0.89032 0.89912 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.04 16 2 O -0.36 -0.28 10.57 -39.25 -0.41 -0.70 16 3 C 0.46 0.41 7.96 36.01 0.29 0.70 16 4 O -0.50 -2.06 15.54 -18.75 -0.29 -2.35 16 5 C -0.10 0.29 5.64 -27.88 -0.16 0.13 16 6 C -0.10 0.21 3.11 -89.81 -0.28 -0.06 16 7 H 0.11 -0.07 7.73 -51.93 -0.40 -0.47 16 8 C -0.15 0.18 7.45 -25.83 -0.19 -0.02 16 9 C 0.12 -0.17 4.24 -67.03 -0.28 -0.45 16 10 H 0.12 0.11 7.46 -51.93 -0.39 -0.28 16 11 N -0.72 1.44 5.25 -52.93 -0.28 1.16 16 12 C 0.52 0.77 7.23 -10.99 -0.08 0.69 16 13 O -0.51 -3.31 16.10 -14.36 -0.23 -3.54 16 14 C 0.07 -0.03 2.64 -27.88 -0.07 -0.10 16 15 C -0.18 0.45 9.07 37.16 0.34 0.79 16 16 O -0.28 -0.81 9.33 -39.33 -0.37 -1.18 16 17 C 0.14 0.23 6.60 -39.22 -0.26 -0.02 16 18 C -0.14 -0.19 9.99 -39.43 -0.39 -0.58 16 19 C -0.07 -0.01 8.66 -39.61 -0.34 -0.35 16 20 C -0.16 -0.03 5.39 -104.60 -0.56 -0.59 16 21 C -0.07 0.02 2.82 36.01 0.10 0.12 16 22 O -0.53 -0.60 12.77 -35.23 -0.45 -1.05 16 23 Si 0.68 -0.52 29.78 -169.99 -5.06 -5.58 16 24 C -0.05 -0.01 9.60 -39.60 -0.38 -0.39 16 25 C -0.21 0.00 8.24 -39.44 -0.32 -0.33 16 26 C -0.14 0.52 7.39 -25.93 -0.19 0.33 16 27 H 0.06 -0.04 8.14 -51.93 -0.42 -0.46 16 28 H 0.06 -0.04 8.13 -51.93 -0.42 -0.47 16 29 H 0.10 -0.32 8.14 -51.93 -0.42 -0.75 16 30 H 0.11 -0.49 7.87 -51.94 -0.41 -0.90 16 31 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 32 H 0.08 0.09 8.14 -51.93 -0.42 -0.33 16 33 H 0.09 -0.20 7.92 -51.93 -0.41 -0.61 16 34 H 0.40 -2.12 8.15 -40.82 -0.33 -2.46 16 35 H 0.10 -0.27 6.32 -51.93 -0.33 -0.60 16 36 H 0.08 -0.41 7.56 -51.93 -0.39 -0.80 16 37 H 0.08 -0.21 6.90 -51.93 -0.36 -0.57 16 38 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 39 H 0.14 0.10 8.06 -52.49 -0.42 -0.33 16 40 H 0.13 -0.23 4.87 -52.49 -0.26 -0.48 16 41 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 42 H 0.38 -0.58 8.70 45.56 0.40 -0.19 16 43 H -0.26 -0.32 7.11 56.52 0.40 0.08 16 44 H -0.26 -0.66 7.11 56.52 0.40 -0.26 16 45 H 0.13 -0.09 8.06 -52.49 -0.42 -0.52 16 46 H 0.13 -0.30 5.43 -52.49 -0.28 -0.58 16 47 H 0.09 -0.51 8.08 -51.93 -0.42 -0.93 16 48 H 0.08 -0.31 8.14 -51.93 -0.42 -0.73 16 LS Contribution 398.19 15.07 6.00 6.00 Total: 0.00 -11.10 398.19 -9.83 -20.93 By element: Atomic # 1 Polarization: -7.58 SS G_CDS: -7.00 Total: -14.58 kcal Atomic # 6 Polarization: 2.62 SS G_CDS: -1.73 Total: 0.89 kcal Atomic # 7 Polarization: 1.44 SS G_CDS: -0.28 Total: 1.16 kcal Atomic # 8 Polarization: -7.06 SS G_CDS: -1.75 Total: -8.82 kcal Atomic # 14 Polarization: -0.52 SS G_CDS: -5.06 Total: -5.58 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -11.10 -9.83 -20.93 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_10157680.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -112.330 kcal (2) G-P(sol) polarization free energy of solvation -11.105 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -123.435 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.825 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.930 kcal (6) G-S(sol) free energy of system = (1) + (5) -133.261 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds