Wall clock time and date at job start Sun Mar 7 2021 14:24:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45199 * 1 3 3 C 1.34228 * 116.99590 * 2 1 4 4 O 1.20829 * 120.00025 * 0.02562 * 3 2 1 5 5 C 1.50700 * 120.00085 * 180.02562 * 3 2 1 6 6 C 1.52999 * 109.47223 * 180.02562 * 5 3 2 7 7 H 1.09004 * 112.90563 * 316.24673 * 6 5 3 8 8 C 1.53774 * 113.61652 * 87.50089 * 6 5 3 9 9 C 1.53781 * 87.08078 * 139.98036 * 8 6 5 10 10 H 1.09004 * 113.68924 * 89.13077 * 9 8 6 11 11 N 1.46505 * 113.61448 * 220.01386 * 9 8 6 12 12 C 1.34773 * 120.00241 * 252.50027 * 11 9 8 13 13 O 1.21685 * 120.00092 * 5.18241 * 12 11 9 14 14 C 1.46681 * 119.99749 * 184.91477 * 12 11 9 15 15 C 1.37876 * 126.23191 * 354.61194 * 14 12 11 16 16 C 1.39837 * 107.08196 * 180.02562 * 15 14 12 17 17 C 1.50703 * 126.06476 * 180.02562 * 16 15 14 18 18 O 1.42895 * 109.47599 * 300.00258 * 17 16 15 19 19 Si 1.86299 * 109.46942 * 180.02562 * 17 16 15 20 20 C 1.35451 * 107.86649 * 0.02562 * 16 15 14 21 21 N 1.35541 * 108.87159 * 359.73074 * 20 16 15 22 22 C 1.46499 * 125.67842 * 180.30544 * 21 20 16 23 23 C 1.53777 * 87.08108 * 334.56632 * 9 8 6 24 24 H 1.09005 * 109.46571 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47118 * 299.99155 * 1 2 3 26 26 H 1.08998 * 109.47807 * 60.00234 * 1 2 3 27 27 H 1.08996 * 109.47452 * 59.99836 * 5 3 2 28 28 H 1.09007 * 109.46978 * 300.00089 * 5 3 2 29 29 H 1.08996 * 113.61932 * 25.43201 * 8 6 5 30 30 H 1.09003 * 113.61565 * 254.52619 * 8 6 5 31 31 H 0.97007 * 119.99559 * 72.49608 * 11 9 8 32 32 H 1.07998 * 126.45876 * 359.97438 * 15 14 12 33 33 H 1.09001 * 109.46799 * 60.01007 * 17 16 15 34 34 H 0.96706 * 113.99823 * 300.00483 * 18 17 16 35 35 H 1.48498 * 110.00177 * 180.02562 * 19 17 16 36 36 H 1.48500 * 110.00185 * 301.32181 * 19 17 16 37 37 H 1.07999 * 125.56696 * 179.97438 * 20 16 15 38 38 H 1.09005 * 109.46963 * 274.17651 * 22 21 20 39 39 H 1.09000 * 109.47265 * 34.17491 * 22 21 20 40 40 H 1.08999 * 109.47113 * 154.17461 * 22 21 20 41 41 H 1.09000 * 113.61387 * 139.98326 * 23 9 8 42 42 H 1.09000 * 113.61610 * 270.88300 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4031 2.2093 0.0005 5 6 3.5662 1.2750 -0.0006 6 6 3.9999 2.7423 0.0002 7 1 3.4244 3.3552 -0.6936 8 6 4.1162 3.3495 1.4081 9 6 5.3815 4.0668 0.9087 10 1 5.1851 5.0422 0.4634 11 7 6.4653 4.0993 1.8940 12 6 6.7757 5.2535 2.5166 13 8 6.0966 6.2462 2.3318 14 6 7.9285 5.3116 3.4217 15 6 8.7154 4.2475 3.8083 16 6 9.6929 4.7519 4.6718 17 6 10.7791 3.9534 5.3454 18 8 10.1886 2.9490 6.1728 19 14 11.8230 5.0857 6.3935 20 6 9.4902 6.0854 4.7953 21 7 8.4244 6.4390 4.0362 22 6 7.8881 7.7950 3.8952 23 6 5.5206 2.9351 -0.1231 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5137 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 3.9557 0.7811 -0.8908 28 1 3.9563 0.7807 0.8892 29 1 4.3109 2.6123 2.1870 30 1 3.3007 4.0275 1.6600 31 1 6.9595 3.2899 2.0982 32 1 8.5984 3.2183 3.5026 33 1 11.4041 3.4795 4.5885 34 1 9.6178 3.2996 6.8703 35 1 12.8983 4.3105 7.0628 36 1 12.4172 6.1540 5.5504 37 1 10.0835 6.7579 5.3970 38 1 7.1854 7.9937 4.7045 39 1 8.7051 8.5152 3.9384 40 1 7.3747 7.8849 2.9379 41 1 5.8388 3.2785 -1.1075 42 1 6.0993 2.0845 0.2370 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_10803934.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:05 Heat of formation + Delta-G solvation = -76.192371 kcal Electronic energy + Delta-G solvation = -25077.265412 eV Core-core repulsion = 21218.978737 eV Total energy + Delta-G solvation = -3858.286675 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 309.145 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.54842 -41.62147 -40.69752 -39.16142 -37.67986 -37.36958 -35.03734 -33.77355 -31.89591 -30.60792 -28.49482 -28.26961 -26.80285 -25.84098 -25.03304 -23.22401 -21.76859 -21.24501 -20.89880 -20.18180 -18.83676 -18.49510 -17.83591 -17.66760 -17.50399 -16.93519 -16.76807 -16.66753 -16.15314 -15.83403 -15.49022 -15.42490 -15.01895 -14.83205 -14.51265 -14.35524 -14.07223 -13.88099 -13.65574 -13.52905 -13.40661 -13.27486 -13.19808 -12.97171 -12.85278 -12.22813 -12.17191 -11.92457 -11.91062 -11.75116 -11.45995 -11.34467 -10.96197 -10.34451 -10.09065 -9.68281 -9.24658 -5.02625 0.45235 1.25069 1.35106 1.51407 1.55348 1.68876 1.75053 2.00849 2.33662 2.36891 3.33815 3.37852 3.57176 3.62950 3.71145 3.76184 3.79414 3.86200 3.91641 4.17037 4.17958 4.21162 4.24856 4.27309 4.30436 4.37410 4.42396 4.57958 4.60890 4.64331 4.65947 4.69355 4.74668 4.76855 4.93785 5.04201 5.16128 5.23324 5.43467 5.50187 5.68148 5.90264 6.11932 6.47104 6.68931 6.78150 7.18330 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.146 4.146 9 C 0.127 3.873 10 H 0.118 0.882 11 N -0.709 5.709 12 C 0.591 3.409 13 O -0.546 6.546 14 C -0.054 4.054 15 C -0.113 4.113 16 C -0.208 4.208 17 C -0.030 4.030 18 O -0.543 6.543 19 Si 0.684 3.316 20 C 0.026 3.974 21 N -0.404 5.404 22 C 0.062 3.938 23 C -0.140 4.140 24 H 0.102 0.898 25 H 0.063 0.937 26 H 0.063 0.937 27 H 0.110 0.890 28 H 0.108 0.892 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.404 0.596 32 H 0.145 0.855 33 H 0.110 0.890 34 H 0.378 0.622 35 H -0.256 1.256 36 H -0.258 1.258 37 H 0.173 0.827 38 H 0.081 0.919 39 H 0.084 0.916 40 H 0.105 0.895 41 H 0.082 0.918 42 H 0.092 0.908 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.915 -1.616 0.978 2.099 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.391 6.391 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.185 4.185 9 C 0.022 3.978 10 H 0.136 0.864 11 N -0.359 5.359 12 C 0.380 3.620 13 O -0.425 6.425 14 C -0.167 4.167 15 C -0.139 4.139 16 C -0.214 4.214 17 C -0.142 4.142 18 O -0.348 6.348 19 Si 0.586 3.414 20 C -0.111 4.111 21 N -0.076 5.076 22 C -0.079 4.079 23 C -0.178 4.178 24 H 0.121 0.879 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.128 0.872 28 H 0.126 0.874 29 H 0.105 0.895 30 H 0.097 0.903 31 H 0.239 0.761 32 H 0.163 0.837 33 H 0.128 0.872 34 H 0.225 0.775 35 H -0.180 1.180 36 H -0.183 1.183 37 H 0.190 0.810 38 H 0.099 0.901 39 H 0.103 0.897 40 H 0.124 0.876 41 H 0.100 0.900 42 H 0.110 0.890 Dipole moment (debyes) X Y Z Total from point charges 1.173 -0.280 0.514 1.311 hybrid contribution -0.116 -0.588 -0.416 0.729 sum 1.057 -0.867 0.098 1.371 Atomic orbital electron populations 1.23298 0.75966 1.03918 1.02694 1.86507 1.23772 1.33545 1.84085 1.23822 0.92307 0.81385 0.72377 1.90696 1.67234 1.36315 1.44818 1.21408 0.87599 0.98865 1.06135 1.22250 0.96122 0.94195 0.99240 0.87412 1.23567 0.98314 1.00202 0.96422 1.22503 0.86310 0.99925 0.89021 0.86428 1.45626 1.36873 1.11064 1.42362 1.17009 0.82457 0.83441 0.79103 1.90801 1.52136 1.35110 1.64415 1.20052 1.02123 0.87287 1.07261 1.21168 0.95559 0.97500 0.99698 1.19787 1.02326 0.93301 1.06030 1.24308 0.97651 0.95398 0.96845 1.86475 1.67428 1.33861 1.47085 0.95034 0.81813 0.79811 0.84758 1.21861 0.92875 0.96270 1.00083 1.43820 1.22687 1.07599 1.33459 1.22376 1.00416 0.79177 1.05901 1.23442 0.95757 0.98541 1.00029 0.87931 0.91786 0.91775 0.87167 0.87368 0.89501 0.90344 0.76052 0.83719 0.87221 0.77526 1.18043 1.18262 0.81033 0.90081 0.89707 0.87636 0.89975 0.88968 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.55 101.05 1.07 1.05 16 2 O -0.36 -0.43 10.57 -39.25 -0.41 -0.85 16 3 C 0.46 0.62 7.96 36.01 0.29 0.91 16 4 O -0.50 -2.24 15.51 -18.75 -0.29 -2.53 16 5 C -0.10 0.23 5.65 -27.88 -0.16 0.07 16 6 C -0.10 0.15 3.15 -89.81 -0.28 -0.13 16 7 H 0.11 -0.02 7.68 -51.93 -0.40 -0.42 16 8 C -0.15 0.07 7.43 -25.92 -0.19 -0.12 16 9 C 0.13 -0.07 4.21 -67.12 -0.28 -0.35 16 10 H 0.12 0.14 7.53 -51.93 -0.39 -0.25 16 11 N -0.71 0.28 5.34 -54.32 -0.29 -0.01 16 12 C 0.59 1.51 7.77 -12.85 -0.10 1.41 16 13 O -0.55 -3.01 14.30 5.20 0.07 -2.94 16 14 C -0.05 -0.10 6.88 -81.98 -0.56 -0.66 16 15 C -0.11 -0.07 10.29 -39.12 -0.40 -0.47 16 16 C -0.21 -0.05 5.44 -105.02 -0.57 -0.62 16 17 C -0.03 0.01 3.02 36.01 0.11 0.12 16 18 O -0.54 -0.09 12.88 -35.23 -0.45 -0.54 16 19 Si 0.68 -0.96 30.59 -169.99 -5.20 -6.16 16 20 C 0.03 -0.01 9.94 -16.91 -0.17 -0.18 16 21 N -0.40 -0.42 3.16 -120.23 -0.38 -0.80 16 22 C 0.06 -0.04 10.64 59.85 0.64 0.60 16 23 C -0.14 0.41 7.39 -25.92 -0.19 0.21 16 24 H 0.10 -0.29 8.14 -51.93 -0.42 -0.71 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.44 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 28 H 0.11 -0.40 7.84 -51.93 -0.41 -0.81 16 29 H 0.09 -0.11 7.89 -51.93 -0.41 -0.52 16 30 H 0.08 0.12 8.14 -51.93 -0.42 -0.30 16 31 H 0.40 -1.10 7.63 -40.82 -0.31 -1.41 16 32 H 0.15 -0.16 7.45 -52.49 -0.39 -0.56 16 33 H 0.11 0.02 7.96 -51.93 -0.41 -0.40 16 34 H 0.38 -1.30 8.70 45.56 0.40 -0.91 16 35 H -0.26 -0.52 7.11 56.52 0.40 -0.12 16 36 H -0.26 -0.20 7.11 56.52 0.40 0.20 16 37 H 0.17 -0.52 6.19 -52.49 -0.32 -0.85 16 38 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 39 H 0.08 -0.24 8.14 -51.93 -0.42 -0.67 16 40 H 0.11 0.13 6.23 -51.93 -0.32 -0.20 16 41 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 42 H 0.09 -0.41 8.08 -51.93 -0.42 -0.82 16 LS Contribution 355.17 15.07 5.35 5.35 Total: 0.00 -9.94 355.17 -8.39 -18.33 By element: Atomic # 1 Polarization: -5.71 SS G_CDS: -5.97 Total: -11.68 kcal Atomic # 6 Polarization: 2.65 SS G_CDS: -0.81 Total: 1.84 kcal Atomic # 7 Polarization: -0.14 SS G_CDS: -0.67 Total: -0.81 kcal Atomic # 8 Polarization: -5.77 SS G_CDS: -1.08 Total: -6.86 kcal Atomic # 14 Polarization: -0.96 SS G_CDS: -5.20 Total: -6.16 kcal Total LS contribution 5.35 Total: 5.35 kcal Total: -9.94 -8.39 -18.33 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_10803934.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -57.866 kcal (2) G-P(sol) polarization free energy of solvation -9.937 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -67.803 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.389 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -18.326 kcal (6) G-S(sol) free energy of system = (1) + (5) -76.192 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.70 seconds