Wall clock time and date at job start Sun Mar 7 2021 14:24:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34228 * 117.00334 * 2 1 4 4 O 1.20826 * 119.99996 * 359.97438 * 3 2 1 5 5 C 1.50695 * 120.00502 * 179.97438 * 3 2 1 6 6 C 1.52999 * 109.47714 * 179.97438 * 5 3 2 7 7 H 1.09000 * 112.84839 * 316.20342 * 6 5 3 8 8 C 1.53783 * 113.68944 * 87.46318 * 6 5 3 9 9 C 1.53779 * 87.08135 * 139.99721 * 8 6 5 10 10 H 1.08992 * 113.68958 * 89.13004 * 9 8 6 11 11 N 1.46503 * 113.61132 * 220.01934 * 9 8 6 12 12 C 1.34771 * 120.00033 * 252.49691 * 11 9 8 13 13 O 1.21620 * 119.99909 * 359.97438 * 12 11 9 14 14 C 1.47303 * 120.00153 * 180.02562 * 12 11 9 15 15 C 1.39824 * 120.13375 * 0.22035 * 14 12 11 16 16 C 1.37586 * 119.96258 * 180.29442 * 15 14 12 17 17 C 1.50702 * 119.87892 * 179.72921 * 16 15 14 18 18 O 1.42892 * 109.47242 * 254.72956 * 17 16 15 19 19 Si 1.86298 * 109.46915 * 14.73495 * 17 16 15 20 20 C 1.39137 * 120.24038 * 359.45960 * 16 15 14 21 21 O 1.35708 * 119.86515 * 180.27094 * 20 16 15 22 22 C 1.42902 * 117.00284 * 180.02562 * 21 20 16 23 23 C 1.38728 * 120.27669 * 0.29714 * 20 16 15 24 24 C 1.38402 * 120.02981 * 359.97438 * 23 20 16 25 25 O 1.35655 * 120.12256 * 180.02562 * 24 23 20 26 26 C 1.42901 * 117.00079 * 359.97438 * 25 24 23 27 27 C 1.53778 * 87.08141 * 334.56795 * 9 8 6 28 28 H 1.09006 * 109.47387 * 60.00107 * 1 2 3 29 29 H 1.09004 * 109.47394 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47616 * 300.00383 * 1 2 3 31 31 H 1.09007 * 109.47196 * 59.99478 * 5 3 2 32 32 H 1.08997 * 109.47211 * 300.00187 * 5 3 2 33 33 H 1.09005 * 113.61471 * 25.44253 * 8 6 5 34 34 H 1.09004 * 113.61510 * 254.54676 * 8 6 5 35 35 H 0.97003 * 120.00026 * 72.50131 * 11 9 8 36 36 H 1.08004 * 120.01665 * 0.04985 * 15 14 12 37 37 H 1.09000 * 109.46724 * 134.73002 * 17 16 15 38 38 H 0.96703 * 114.00176 * 180.02562 * 18 17 16 39 39 H 1.48506 * 109.99834 * 178.68053 * 19 17 16 40 40 H 1.48502 * 110.00011 * 299.99318 * 19 17 16 41 41 H 1.09001 * 109.47031 * 299.99927 * 22 21 20 42 42 H 1.09000 * 109.47219 * 60.00031 * 22 21 20 43 43 H 1.08999 * 109.47048 * 180.02562 * 22 21 20 44 44 H 1.07997 * 119.98925 * 179.97438 * 23 20 16 45 45 H 1.09002 * 109.47401 * 180.02562 * 26 25 24 46 46 H 1.09004 * 109.47084 * 300.00212 * 26 25 24 47 47 H 1.08992 * 109.47133 * 59.99973 * 26 25 24 48 48 H 1.08999 * 113.61689 * 139.97876 * 27 9 8 49 49 H 1.09000 * 113.61373 * 270.80479 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0002 2.7420 -0.0002 7 1 3.4252 3.3531 -0.6960 8 6 4.1150 3.3531 1.4063 9 6 5.3807 4.0692 0.9063 10 1 5.1847 5.0432 0.4582 11 7 6.4635 4.1042 1.8925 12 6 6.7732 5.2601 2.5124 13 8 6.1542 6.2742 2.2528 14 6 7.8623 5.2954 3.5036 15 6 8.5796 4.1324 3.8002 16 6 9.5921 4.1681 4.7310 17 6 10.3600 2.9121 5.0536 18 8 9.9465 2.4151 6.3279 19 14 10.0253 1.6269 3.7471 20 6 9.9134 5.3608 5.3715 21 8 10.9172 5.3885 6.2844 22 6 11.1950 6.6452 6.9053 23 6 9.2116 6.5217 5.0813 24 6 8.1872 6.4975 4.1509 25 8 7.5001 7.6317 3.8652 26 6 7.8863 8.8174 4.5630 27 6 5.5209 2.9347 -0.1224 28 1 -0.3634 0.5138 -0.8900 29 1 -0.3634 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 3.9564 0.7805 -0.8891 32 1 3.9557 0.7809 0.8908 33 1 4.3089 2.6179 2.1874 34 1 3.2991 4.0316 1.6556 35 1 6.9576 3.2954 2.0993 36 1 8.3364 3.2057 3.3016 37 1 11.4267 3.1350 5.0792 38 1 10.4008 1.6062 6.6009 39 1 10.8016 0.3944 4.0365 40 1 8.5742 1.3143 3.7022 41 1 11.4721 7.3736 6.1432 42 1 10.3080 6.9928 7.4348 43 1 12.0173 6.5278 7.6112 44 1 9.4646 7.4448 5.5815 45 1 7.2585 9.6487 4.2423 46 1 7.7651 8.6637 5.6354 47 1 8.9297 9.0442 4.3442 48 1 5.8400 3.2754 -1.1074 49 1 6.1005 2.0857 0.2401 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12297780.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:17 Heat of formation + Delta-G solvation = -160.739052 kcal Electronic energy + Delta-G solvation = -33496.439249 eV Core-core repulsion = 28778.784122 eV Total energy + Delta-G solvation = -4717.655127 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.17 seconds Orbital eigenvalues (eV) -42.01532 -41.55285 -40.70408 -40.00159 -39.07144 -38.33075 -37.33257 -37.06524 -34.62736 -32.32091 -32.06173 -31.08690 -29.04767 -28.48690 -28.15055 -26.70679 -26.05848 -25.22711 -23.89373 -22.64332 -21.67904 -21.35595 -20.51463 -19.91700 -18.59204 -18.52412 -18.42889 -18.08386 -17.68290 -17.46283 -17.19806 -17.04255 -16.62747 -16.52891 -16.35536 -16.08576 -15.73652 -15.62012 -15.45777 -15.33162 -14.81873 -14.44723 -14.28729 -14.19950 -13.85262 -13.82834 -13.63565 -13.54284 -13.45945 -13.33256 -12.93241 -12.88625 -12.76751 -12.58063 -12.49777 -12.15633 -12.07274 -11.90366 -11.82413 -11.71657 -11.58584 -11.36945 -11.27714 -10.61845 -10.42419 -9.90393 -9.83220 -9.07557 -5.05252 -0.13352 0.17208 1.21063 1.29243 1.48551 1.76864 1.83274 1.91747 2.08389 2.19784 2.28478 2.73406 3.32984 3.42717 3.46404 3.54631 3.68859 3.72123 3.80757 3.86298 3.89192 3.93034 3.99879 4.07474 4.15679 4.17777 4.18951 4.20697 4.25627 4.26850 4.29282 4.35874 4.43551 4.46451 4.48130 4.57286 4.64042 4.66641 4.78056 4.84134 4.84896 4.99828 5.04685 5.10263 5.13712 5.33637 5.36134 5.48371 5.67869 6.04123 6.33402 6.49262 6.65284 6.82253 7.45741 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.148 4.148 9 C 0.127 3.873 10 H 0.120 0.880 11 N -0.723 5.723 12 C 0.568 3.432 13 O -0.517 6.517 14 C -0.209 4.209 15 C -0.007 4.007 16 C -0.150 4.150 17 C -0.059 4.059 18 O -0.532 6.532 19 Si 0.678 3.322 20 C 0.222 3.778 21 O -0.298 6.298 22 C 0.022 3.978 23 C -0.314 4.314 24 C 0.234 3.766 25 O -0.274 6.274 26 C 0.018 3.982 27 C -0.140 4.140 28 H 0.063 0.937 29 H 0.102 0.898 30 H 0.063 0.937 31 H 0.110 0.890 32 H 0.107 0.893 33 H 0.084 0.916 34 H 0.077 0.923 35 H 0.396 0.604 36 H 0.140 0.860 37 H 0.077 0.923 38 H 0.378 0.622 39 H -0.257 1.257 40 H -0.252 1.252 41 H 0.060 0.940 42 H 0.059 0.941 43 H 0.106 0.894 44 H 0.145 0.855 45 H 0.107 0.893 46 H 0.057 0.943 47 H 0.058 0.942 48 H 0.082 0.918 49 H 0.090 0.910 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.538 -2.437 -0.191 6.053 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.280 6.280 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.187 4.187 9 C 0.022 3.978 10 H 0.137 0.863 11 N -0.375 5.375 12 C 0.356 3.644 13 O -0.393 6.393 14 C -0.213 4.213 15 C -0.026 4.026 16 C -0.151 4.151 17 C -0.169 4.169 18 O -0.339 6.339 19 Si 0.579 3.421 20 C 0.174 3.826 21 O -0.209 6.209 22 C -0.073 4.073 23 C -0.333 4.333 24 C 0.185 3.815 25 O -0.184 6.184 26 C -0.077 4.077 27 C -0.178 4.178 28 H 0.082 0.918 29 H 0.120 0.880 30 H 0.082 0.918 31 H 0.128 0.872 32 H 0.125 0.875 33 H 0.103 0.897 34 H 0.096 0.904 35 H 0.231 0.769 36 H 0.157 0.843 37 H 0.095 0.905 38 H 0.225 0.775 39 H -0.182 1.182 40 H -0.177 1.177 41 H 0.078 0.922 42 H 0.078 0.922 43 H 0.124 0.876 44 H 0.163 0.837 45 H 0.125 0.875 46 H 0.075 0.925 47 H 0.076 0.924 48 H 0.101 0.899 49 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 4.128 -1.756 -0.639 4.531 hybrid contribution 0.362 -0.429 1.670 1.762 sum 4.490 -2.186 1.032 5.099 Atomic orbital electron populations 1.23291 0.76021 1.03874 1.02694 1.86503 1.23733 1.33609 1.84129 1.23838 0.92330 0.81367 0.72392 1.90696 1.67232 1.36292 1.44755 1.21414 0.87535 0.99019 1.06039 1.22255 0.96248 0.94015 0.99318 0.87412 1.23580 0.98611 1.00208 0.96316 1.22445 0.86361 0.99850 0.89109 0.86253 1.45875 1.37262 1.11305 1.43099 1.17817 0.82704 0.83426 0.80493 1.90846 1.51971 1.33066 1.63449 1.19042 1.03902 0.92167 1.06191 1.20816 0.91144 0.96701 0.93912 1.18295 1.02049 0.92572 1.02218 1.24538 1.00138 0.99178 0.93033 1.86622 1.67409 1.45739 1.34148 0.95335 0.81274 0.78996 0.86500 1.18689 0.85476 0.92342 0.86059 1.86123 1.48554 1.34345 1.51888 1.23208 1.02196 0.84248 0.97670 1.21274 1.03935 0.99891 1.08238 1.18719 0.87466 0.86184 0.89152 1.86404 1.55168 1.15345 1.61436 1.23240 1.01600 0.85911 0.96911 1.23437 0.95589 0.98603 1.00212 0.91777 0.87968 0.91807 0.87179 0.87489 0.89732 0.90400 0.76854 0.84311 0.90543 0.77482 1.18203 1.17671 0.92178 0.92248 0.87574 0.83744 0.87481 0.92452 0.92353 0.89920 0.89144 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 0.00 10.56 101.05 1.07 1.06 16 2 O -0.36 -0.59 10.56 -39.25 -0.41 -1.00 16 3 C 0.46 0.85 7.96 36.00 0.29 1.14 16 4 O -0.50 -2.51 15.51 -18.75 -0.29 -2.80 16 5 C -0.10 0.17 5.65 -27.89 -0.16 0.01 16 6 C -0.10 0.09 3.15 -89.81 -0.28 -0.19 16 7 H 0.11 0.05 7.68 -51.93 -0.40 -0.35 16 8 C -0.15 -0.08 7.43 -25.92 -0.19 -0.27 16 9 C 0.13 0.05 4.24 -67.12 -0.28 -0.23 16 10 H 0.12 0.27 7.46 -51.93 -0.39 -0.12 16 11 N -0.72 -0.55 5.30 -54.13 -0.29 -0.84 16 12 C 0.57 2.35 7.76 -12.58 -0.10 2.25 16 13 O -0.52 -4.09 14.75 -16.66 -0.25 -4.34 16 14 C -0.21 -0.64 5.89 -104.83 -0.62 -1.26 16 15 C -0.01 -0.01 8.14 -39.23 -0.32 -0.33 16 16 C -0.15 -0.24 5.31 -104.53 -0.55 -0.79 16 17 C -0.06 -0.01 2.36 36.01 0.08 0.08 16 18 O -0.53 -0.77 12.86 -35.23 -0.45 -1.23 16 19 Si 0.68 -1.25 30.18 -169.99 -5.13 -6.38 16 20 C 0.22 0.44 6.67 -39.07 -0.26 0.18 16 21 O -0.30 -0.42 9.80 -18.83 -0.18 -0.60 16 22 C 0.02 -0.05 9.80 101.05 0.99 0.95 16 23 C -0.31 -0.45 8.01 -39.34 -0.31 -0.76 16 24 C 0.23 0.78 6.70 -38.73 -0.26 0.52 16 25 O -0.27 -1.12 8.56 -40.59 -0.35 -1.47 16 26 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 27 C -0.14 0.33 7.39 -25.92 -0.19 0.14 16 28 H 0.06 0.00 8.13 -51.93 -0.42 -0.42 16 29 H 0.10 -0.25 8.14 -51.93 -0.42 -0.68 16 30 H 0.06 0.01 8.13 -51.93 -0.42 -0.41 16 31 H 0.11 -0.39 8.14 -51.92 -0.42 -0.81 16 32 H 0.11 -0.33 7.85 -51.93 -0.41 -0.74 16 33 H 0.08 -0.02 7.90 -51.93 -0.41 -0.43 16 34 H 0.08 0.20 8.14 -51.93 -0.42 -0.22 16 35 H 0.40 -0.73 6.74 -40.82 -0.28 -1.01 16 36 H 0.14 -0.21 3.20 -52.48 -0.17 -0.37 16 37 H 0.08 -0.06 7.82 -51.93 -0.41 -0.46 16 38 H 0.38 -0.96 8.74 45.56 0.40 -0.56 16 39 H -0.26 -0.06 7.11 56.52 0.40 0.34 16 40 H -0.25 0.06 6.75 56.52 0.38 0.44 16 41 H 0.06 -0.20 7.65 -51.93 -0.40 -0.59 16 42 H 0.06 -0.15 7.65 -51.93 -0.40 -0.55 16 43 H 0.11 -0.38 8.14 -51.93 -0.42 -0.81 16 44 H 0.15 -0.14 4.50 -52.49 -0.24 -0.38 16 45 H 0.11 -0.15 8.14 -51.93 -0.42 -0.58 16 46 H 0.06 -0.09 7.66 -51.93 -0.40 -0.49 16 47 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 48 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 49 H 0.09 -0.37 8.08 -51.93 -0.42 -0.79 16 LS Contribution 403.88 15.07 6.09 6.09 Total: 0.00 -11.95 403.88 -8.28 -20.23 By element: Atomic # 1 Polarization: -4.24 SS G_CDS: -6.90 Total: -11.14 kcal Atomic # 6 Polarization: 3.60 SS G_CDS: -0.11 Total: 3.48 kcal Atomic # 7 Polarization: -0.55 SS G_CDS: -0.29 Total: -0.84 kcal Atomic # 8 Polarization: -9.50 SS G_CDS: -1.94 Total: -11.44 kcal Atomic # 14 Polarization: -1.25 SS G_CDS: -5.13 Total: -6.38 kcal Total LS contribution 6.09 Total: 6.09 kcal Total: -11.95 -8.28 -20.23 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12297780.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -140.508 kcal (2) G-P(sol) polarization free energy of solvation -11.954 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -152.462 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.277 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.231 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.739 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.17 seconds