Wall clock time and date at job start Sun Mar 7 2021 14:24:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45198 * 1 3 3 C 1.34227 * 116.99964 * 2 1 4 4 O 1.20830 * 120.00267 * 0.02562 * 3 2 1 5 5 C 1.50701 * 119.99958 * 180.02562 * 3 2 1 6 6 C 1.53001 * 109.47124 * 180.02562 * 5 3 2 7 7 H 1.09003 * 112.90715 * 316.25339 * 6 5 3 8 8 C 1.53780 * 113.61378 * 87.50034 * 6 5 3 9 9 C 1.53782 * 87.07973 * 139.98153 * 8 6 5 10 10 H 1.08998 * 113.69005 * 89.13056 * 9 8 6 11 11 N 1.46499 * 113.61315 * 220.01554 * 9 8 6 12 12 C 1.34777 * 120.00195 * 252.49517 * 11 9 8 13 13 O 1.21573 * 119.99941 * 0.02562 * 12 11 9 14 14 C 1.47689 * 119.99887 * 180.27913 * 12 11 9 15 15 C 1.39826 * 120.16655 * 179.73019 * 14 12 11 16 16 F 1.35097 * 120.10941 * 359.97438 * 15 14 12 17 17 C 1.38325 * 119.78064 * 180.02562 * 15 14 12 18 18 C 1.38197 * 120.11523 * 359.97438 * 17 15 14 19 19 C 1.38460 * 120.34267 * 0.02562 * 18 17 15 20 20 C 1.50703 * 119.89418 * 179.97438 * 19 18 17 21 21 O 1.42891 * 109.47232 * 245.00298 * 20 19 18 22 22 Si 1.86304 * 109.46767 * 5.00118 * 20 19 18 23 23 C 1.37860 * 120.21506 * 359.71625 * 19 18 17 24 24 C 1.53775 * 87.08323 * 334.56980 * 9 8 6 25 25 H 1.09002 * 109.47206 * 299.99501 * 1 2 3 26 26 H 1.09001 * 109.47448 * 60.00180 * 1 2 3 27 27 H 1.09001 * 109.47259 * 179.97438 * 1 2 3 28 28 H 1.08995 * 109.47545 * 59.99971 * 5 3 2 29 29 H 1.09000 * 109.47274 * 299.99976 * 5 3 2 30 30 H 1.08993 * 113.61656 * 25.43476 * 8 6 5 31 31 H 1.09004 * 113.61428 * 254.52777 * 8 6 5 32 32 H 0.97000 * 120.00069 * 72.50245 * 11 9 8 33 33 H 1.07995 * 119.94206 * 180.02562 * 17 15 14 34 34 H 1.08000 * 119.83014 * 180.02562 * 18 17 15 35 35 H 1.08997 * 109.46648 * 124.99457 * 20 19 18 36 36 H 0.96706 * 114.00117 * 180.02562 * 21 20 19 37 37 H 1.48500 * 109.99885 * 178.67847 * 22 20 19 38 38 H 1.48498 * 110.00224 * 299.99961 * 22 20 19 39 39 H 1.08000 * 120.05996 * 180.27569 * 23 19 18 40 40 H 1.08990 * 113.61825 * 139.98413 * 24 9 8 41 41 H 1.09001 * 113.61037 * 270.88351 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2094 0.0005 5 6 3.5663 1.2748 -0.0006 6 6 4.0001 2.7421 0.0002 7 1 3.4245 3.3550 -0.6935 8 6 4.1164 3.3493 1.4082 9 6 5.3817 4.0665 0.9088 10 1 5.1854 5.0419 0.4635 11 7 6.4655 4.0988 1.8940 12 6 6.7760 5.2531 2.5167 13 8 6.1564 6.2674 2.2612 14 6 7.8726 5.2869 3.5054 15 6 8.2014 6.4837 4.1493 16 9 7.5172 7.6144 3.8690 17 6 9.2303 6.5064 5.0736 18 6 9.9307 5.3500 5.3601 19 6 9.6093 4.1622 4.7254 20 6 10.3800 2.9073 5.0450 21 8 11.0977 2.4807 3.8854 22 14 11.5811 3.2514 6.4270 23 6 8.5829 4.1226 3.8058 24 6 5.5208 2.9350 -0.1231 25 1 -0.3634 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 -0.3634 -1.0277 -0.0005 28 1 3.9557 0.7810 -0.8908 29 1 3.9564 0.7806 0.8891 30 1 4.3111 2.6120 2.1870 31 1 3.3009 4.0273 1.6601 32 1 6.9597 3.2895 2.0982 33 1 9.4862 7.4293 5.5728 34 1 10.7329 5.3729 6.0828 35 1 9.6873 2.1239 5.3524 36 1 11.6174 1.6760 4.0183 37 1 12.3250 2.0137 6.7734 38 1 12.5311 4.3180 6.0206 39 1 8.3314 3.1938 3.3155 40 1 5.8390 3.2783 -1.1074 41 1 6.0994 2.0843 0.2370 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_17321982_12335834.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:21 Heat of formation + Delta-G solvation = -138.861511 kcal Electronic energy + Delta-G solvation = -26773.998562 eV Core-core repulsion = 22536.277763 eV Total energy + Delta-G solvation = -4237.720799 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.125 amu Computer time = 0.74 seconds Orbital eigenvalues (eV) -49.80561 -41.72969 -41.23604 -40.30870 -39.17733 -37.73170 -37.37951 -34.92419 -32.84633 -32.47072 -31.36966 -28.45792 -26.80799 -26.71472 -25.90007 -24.38782 -22.89184 -21.73668 -21.55242 -20.59149 -19.08488 -18.75837 -18.52759 -18.22475 -17.92551 -17.60440 -17.49791 -16.79793 -16.71187 -16.48826 -16.12437 -15.79186 -15.69535 -15.68508 -14.88406 -14.77105 -14.48599 -14.41365 -14.17974 -13.88784 -13.83898 -13.63240 -13.42172 -13.34454 -12.98744 -12.87491 -12.75957 -12.52291 -12.19065 -11.92967 -11.88018 -11.75882 -11.45943 -11.35012 -10.94406 -10.66158 -10.36995 -10.04520 -9.80160 -5.12028 -0.46954 -0.06426 1.08648 1.24268 1.44159 1.67672 1.71735 1.80458 2.05161 2.48292 3.05449 3.08271 3.33219 3.36485 3.39575 3.51172 3.60559 3.65490 3.74908 3.85451 3.92429 4.02876 4.14509 4.17196 4.19978 4.24029 4.29151 4.41050 4.47152 4.56161 4.60341 4.67299 4.69992 4.72991 4.83681 4.88910 4.93601 5.04056 5.09917 5.21480 5.42785 5.51035 5.57522 6.23941 6.40989 6.77406 7.16969 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.363 6.363 3 C 0.458 3.542 4 O -0.503 6.503 5 C -0.102 4.102 6 C -0.099 4.099 7 H 0.108 0.892 8 C -0.147 4.147 9 C 0.124 3.876 10 H 0.120 0.880 11 N -0.715 5.715 12 C 0.560 3.440 13 O -0.519 6.519 14 C -0.176 4.176 15 C 0.167 3.833 16 F -0.111 7.111 17 C -0.156 4.156 18 C -0.058 4.058 19 C -0.094 4.094 20 C -0.075 4.075 21 O -0.536 6.536 22 Si 0.683 3.317 23 C -0.030 4.030 24 C -0.140 4.140 25 H 0.064 0.936 26 H 0.064 0.936 27 H 0.102 0.898 28 H 0.110 0.890 29 H 0.107 0.893 30 H 0.086 0.914 31 H 0.079 0.921 32 H 0.400 0.600 33 H 0.151 0.849 34 H 0.142 0.858 35 H 0.081 0.919 36 H 0.383 0.617 37 H -0.258 1.258 38 H -0.252 1.252 39 H 0.137 0.863 40 H 0.082 0.918 41 H 0.091 0.909 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.807 -7.307 3.129 8.430 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.301 3.699 4 O -0.390 6.390 5 C -0.140 4.140 6 C -0.118 4.118 7 H 0.126 0.874 8 C -0.185 4.185 9 C 0.019 3.981 10 H 0.138 0.862 11 N -0.367 5.367 12 C 0.347 3.653 13 O -0.395 6.395 14 C -0.180 4.180 15 C 0.146 3.854 16 F -0.088 7.088 17 C -0.175 4.175 18 C -0.076 4.076 19 C -0.094 4.094 20 C -0.184 4.184 21 O -0.343 6.343 22 Si 0.583 3.417 23 C -0.049 4.049 24 C -0.178 4.178 25 H 0.082 0.918 26 H 0.082 0.918 27 H 0.121 0.879 28 H 0.128 0.872 29 H 0.126 0.874 30 H 0.104 0.896 31 H 0.097 0.903 32 H 0.236 0.764 33 H 0.168 0.832 34 H 0.159 0.841 35 H 0.099 0.901 36 H 0.231 0.769 37 H -0.183 1.183 38 H -0.177 1.177 39 H 0.155 0.845 40 H 0.101 0.899 41 H 0.109 0.891 Dipole moment (debyes) X Y Z Total from point charges 2.642 -5.681 2.918 6.911 hybrid contribution 0.271 -1.106 -0.750 1.363 sum 2.913 -6.786 2.168 7.697 Atomic orbital electron populations 1.23298 0.75955 1.03910 1.02718 1.86503 1.23780 1.33551 1.84105 1.23819 0.92299 0.81394 0.72422 1.90701 1.67226 1.36298 1.44744 1.21403 0.87614 0.98869 1.06072 1.22253 0.96135 0.94172 0.99242 0.87355 1.23570 0.98369 1.00182 0.96407 1.22525 0.86320 1.00081 0.89133 0.86232 1.45846 1.36974 1.11243 1.42617 1.18005 0.82767 0.83759 0.80770 1.90874 1.52030 1.33069 1.63530 1.20058 1.01260 0.94042 1.02605 1.17750 0.91112 0.81883 0.94608 1.91630 1.77546 1.47873 1.91797 1.21144 0.96311 1.00520 0.99496 1.21076 0.97866 0.91066 0.97621 1.19187 0.97057 0.94211 0.98938 1.24751 1.00710 0.96505 0.96445 1.86583 1.65530 1.48186 1.34037 0.95020 0.81491 0.81855 0.83290 1.20984 0.92738 0.96697 0.94468 1.23433 0.95732 0.98477 1.00129 0.91773 0.91768 0.87937 0.87178 0.87443 0.89585 0.90271 0.76414 0.83159 0.84062 0.90115 0.76886 1.18311 1.17685 0.84520 0.89938 0.89099 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.02 10.56 101.05 1.07 1.05 16 2 O -0.36 -0.40 10.57 -39.25 -0.41 -0.81 16 3 C 0.46 0.60 7.96 36.01 0.29 0.89 16 4 O -0.50 -2.27 15.51 -18.75 -0.29 -2.56 16 5 C -0.10 0.23 5.65 -27.88 -0.16 0.07 16 6 C -0.10 0.14 3.15 -89.81 -0.28 -0.14 16 7 H 0.11 0.01 7.68 -51.93 -0.40 -0.39 16 8 C -0.15 0.05 7.43 -25.92 -0.19 -0.14 16 9 C 0.12 -0.02 4.24 -67.12 -0.28 -0.30 16 10 H 0.12 0.24 7.46 -51.93 -0.39 -0.15 16 11 N -0.72 0.10 5.31 -54.01 -0.29 -0.19 16 12 C 0.56 1.89 7.77 -12.40 -0.10 1.80 16 13 O -0.52 -3.94 14.94 5.30 0.08 -3.86 16 14 C -0.18 -0.33 5.88 -104.91 -0.62 -0.95 16 15 C 0.17 0.44 7.29 -38.96 -0.28 0.16 16 16 F -0.11 -0.59 15.55 2.25 0.04 -0.56 16 17 C -0.16 0.03 10.01 -39.56 -0.40 -0.37 16 18 C -0.06 0.08 8.66 -39.51 -0.34 -0.27 16 19 C -0.09 0.10 5.38 -104.68 -0.56 -0.47 16 20 C -0.07 0.19 2.79 36.01 0.10 0.29 16 21 O -0.54 0.73 12.81 -35.23 -0.45 0.28 16 22 Si 0.68 -2.01 29.84 -169.99 -5.07 -7.08 16 23 C -0.03 0.02 9.17 -39.19 -0.36 -0.34 16 24 C -0.14 0.38 7.39 -25.92 -0.19 0.18 16 25 H 0.06 -0.02 8.13 -51.93 -0.42 -0.45 16 26 H 0.06 -0.03 8.13 -51.93 -0.42 -0.45 16 27 H 0.10 -0.30 8.14 -51.93 -0.42 -0.72 16 28 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 29 H 0.11 -0.42 7.84 -51.93 -0.41 -0.83 16 30 H 0.09 -0.13 7.89 -51.93 -0.41 -0.54 16 31 H 0.08 0.14 8.14 -51.93 -0.42 -0.28 16 32 H 0.40 -1.22 6.76 -40.82 -0.28 -1.49 16 33 H 0.15 -0.34 8.06 -52.49 -0.42 -0.76 16 34 H 0.14 -0.48 4.84 -52.49 -0.25 -0.74 16 35 H 0.08 -0.37 7.96 -51.93 -0.41 -0.78 16 36 H 0.38 -1.96 8.74 45.56 0.40 -1.56 16 37 H -0.26 0.18 7.11 56.52 0.40 0.58 16 38 H -0.25 -0.04 7.04 56.52 0.40 0.36 16 39 H 0.14 -0.43 6.41 -52.49 -0.34 -0.76 16 40 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 41 H 0.09 -0.40 8.08 -51.93 -0.42 -0.82 16 LS Contribution 352.54 15.07 5.31 5.31 Total: 0.00 -10.81 352.54 -8.47 -19.28 By element: Atomic # 1 Polarization: -6.23 SS G_CDS: -5.06 Total: -11.30 kcal Atomic # 6 Polarization: 3.79 SS G_CDS: -2.31 Total: 1.48 kcal Atomic # 7 Polarization: 0.10 SS G_CDS: -0.29 Total: -0.19 kcal Atomic # 8 Polarization: -5.87 SS G_CDS: -1.08 Total: -6.95 kcal Atomic # 9 Polarization: -0.59 SS G_CDS: 0.04 Total: -0.56 kcal Atomic # 14 Polarization: -2.01 SS G_CDS: -5.07 Total: -7.08 kcal Total LS contribution 5.31 Total: 5.31 kcal Total: -10.81 -8.47 -19.28 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12335834.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -119.581 kcal (2) G-P(sol) polarization free energy of solvation -10.815 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -130.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.466 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.281 kcal (6) G-S(sol) free energy of system = (1) + (5) -138.862 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.74 seconds