Wall clock time and date at job start Sun Mar 7 2021 14:24:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45205 * 1 3 3 C 1.34226 * 116.99699 * 2 1 4 4 O 1.20821 * 120.00606 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99549 * 179.97438 * 3 2 1 6 6 C 1.53003 * 109.46962 * 179.97438 * 5 3 2 7 7 H 1.09004 * 112.84496 * 43.80366 * 6 5 3 8 8 C 1.53778 * 113.61196 * 174.99667 * 6 5 3 9 9 C 1.53787 * 87.08035 * 140.06532 * 8 6 5 10 10 H 1.09004 * 113.61202 * 89.11582 * 9 8 6 11 11 N 1.46496 * 113.61566 * 220.01945 * 9 8 6 12 12 C 1.34776 * 120.00015 * 205.00016 * 11 9 8 13 13 O 1.21550 * 119.99909 * 359.97438 * 12 11 9 14 14 C 1.47844 * 120.00143 * 180.02562 * 12 11 9 15 15 C 1.39546 * 120.13808 * 0.02562 * 14 12 11 16 16 C 1.38074 * 119.83835 * 179.97438 * 15 14 12 17 17 Br 1.89101 * 119.93441 * 179.97438 * 16 15 14 18 18 C 1.38418 * 120.12963 * 0.02562 * 16 15 14 19 19 C 1.38370 * 120.28080 * 359.97438 * 18 16 15 20 20 C 1.50698 * 119.91975 * 180.02562 * 19 18 16 21 21 O 1.42898 * 109.46708 * 244.99531 * 20 19 18 22 22 Si 1.86292 * 109.47567 * 4.99594 * 20 19 18 23 23 C 1.37939 * 120.15558 * 359.74175 * 19 18 16 24 24 C 1.53778 * 113.68969 * 272.53432 * 6 5 3 25 25 H 1.08998 * 109.47522 * 299.99875 * 1 2 3 26 26 H 1.09001 * 109.46859 * 60.00674 * 1 2 3 27 27 H 1.09002 * 109.46921 * 179.97438 * 1 2 3 28 28 H 1.08994 * 109.47332 * 59.99634 * 5 3 2 29 29 H 1.08999 * 109.47023 * 299.99739 * 5 3 2 30 30 H 1.08998 * 113.61879 * 25.52015 * 8 6 5 31 31 H 1.08997 * 113.69304 * 254.62101 * 8 6 5 32 32 H 0.96998 * 120.00377 * 24.99850 * 11 9 8 33 33 H 1.07992 * 120.07962 * 359.94964 * 15 14 12 34 34 H 1.07999 * 119.86461 * 179.97438 * 18 16 15 35 35 H 1.09004 * 109.47070 * 125.00081 * 20 19 18 36 36 H 0.96700 * 114.00387 * 60.00890 * 21 20 19 37 37 H 1.48502 * 110.00074 * 58.67942 * 22 20 19 38 38 H 1.48494 * 110.00470 * 179.97438 * 22 20 19 39 39 H 1.08002 * 120.06704 * 180.25793 * 23 19 18 40 40 H 1.08993 * 113.61229 * 105.46192 * 24 6 5 41 41 H 1.09000 * 113.61263 * 334.55842 * 24 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0002 2.7421 -0.0002 7 1 3.4246 3.3539 0.6945 8 6 5.5208 2.9348 0.1232 9 6 5.3816 4.0680 -0.9071 10 1 5.1837 5.0424 -0.4604 11 7 6.4652 4.1018 -1.8924 12 6 6.7755 5.2569 -2.5135 13 8 6.1559 6.2706 -2.2565 14 6 7.8687 5.2909 -3.5082 15 6 8.5808 4.1285 -3.8066 16 6 9.6003 4.1672 -4.7371 17 35 10.5675 2.5938 -5.1430 18 6 9.9163 5.3556 -5.3724 19 6 9.2136 6.5113 -5.0805 20 6 9.5641 7.8005 -5.7775 21 8 10.0635 8.7381 -4.8217 22 14 10.8681 7.4746 -7.0675 23 6 8.1891 6.4847 -4.1572 24 6 4.1162 3.3513 -1.4074 25 1 -0.3634 0.5138 0.8900 26 1 -0.3633 0.5137 -0.8901 27 1 -0.3633 -1.0277 -0.0005 28 1 3.9564 0.7805 -0.8890 29 1 3.9557 0.7809 0.8908 30 1 6.0995 2.0848 -0.2382 31 1 5.8405 3.2767 1.1076 32 1 6.9594 3.2928 -2.0977 33 1 8.3354 3.2011 -3.3108 34 1 10.7148 5.3811 -6.0992 35 1 8.6737 8.2087 -6.2559 36 1 10.8572 8.4405 -4.3563 37 1 10.3728 6.4769 -8.0496 38 1 11.2221 8.7382 -7.7625 39 1 7.6387 7.3866 -3.9335 40 1 3.3006 4.0295 -1.6581 41 1 4.3108 2.6150 -2.1872 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_17321982_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 14:24:48 Heat of formation + Delta-G solvation = -94.795149 kcal Electronic energy + Delta-G solvation = -26076.718406 eV Core-core repulsion = 21970.544441 eV Total energy + Delta-G solvation = -4106.173965 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.045 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -41.85398 -41.47145 -40.43620 -39.28682 -37.68367 -37.50449 -35.10286 -33.61467 -33.05502 -31.42178 -30.45041 -28.44348 -27.04496 -26.70644 -25.99477 -23.90008 -22.82640 -21.89282 -21.58425 -20.52304 -19.12613 -18.57456 -18.08162 -17.75964 -17.60826 -17.53671 -17.20120 -16.51736 -16.41814 -16.14518 -16.07885 -15.63810 -15.10070 -14.96268 -14.88609 -14.50636 -14.32187 -14.16569 -13.88155 -13.49674 -13.38045 -13.27981 -13.03059 -12.93731 -12.82129 -12.22887 -12.19360 -11.97666 -11.94284 -11.87779 -11.82216 -11.49635 -11.43506 -11.34046 -11.15432 -10.56380 -10.35144 -10.07675 -9.90653 -5.06127 -0.52171 -0.16281 0.43820 1.18002 1.20786 1.50232 1.59478 1.75698 1.91881 2.02124 2.45586 3.26898 3.34898 3.42642 3.48495 3.55010 3.74126 3.80295 3.82149 3.87470 3.90308 3.96281 4.20232 4.23443 4.25984 4.27330 4.32412 4.46691 4.48809 4.63098 4.68439 4.73626 4.75412 4.78084 4.85987 4.92469 4.99562 5.08359 5.09171 5.21872 5.36251 5.40941 5.55594 6.38023 6.71253 6.71498 7.04579 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.028 3.972 2 O -0.367 6.367 3 C 0.453 3.547 4 O -0.545 6.545 5 C -0.096 4.096 6 C -0.097 4.097 7 H 0.086 0.914 8 C -0.116 4.116 9 C 0.114 3.886 10 H 0.092 0.908 11 N -0.696 5.696 12 C 0.558 3.442 13 O -0.577 6.577 14 C -0.136 4.136 15 C -0.042 4.042 16 C -0.099 4.099 17 Br -0.025 7.025 18 C -0.059 4.059 19 C -0.117 4.117 20 C -0.077 4.077 21 O -0.553 6.553 22 Si 0.774 3.226 23 C -0.033 4.033 24 C -0.148 4.148 25 H 0.058 0.942 26 H 0.057 0.943 27 H 0.128 0.872 28 H 0.134 0.866 29 H 0.137 0.863 30 H 0.123 0.877 31 H 0.088 0.912 32 H 0.417 0.583 33 H 0.166 0.834 34 H 0.159 0.841 35 H 0.110 0.890 36 H 0.397 0.603 37 H -0.277 1.277 38 H -0.294 1.294 39 H 0.127 0.873 40 H 0.046 0.954 41 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.717 -8.640 1.063 10.415 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.283 6.283 3 C 0.298 3.702 4 O -0.435 6.435 5 C -0.133 4.133 6 C -0.116 4.116 7 H 0.104 0.896 8 C -0.154 4.154 9 C 0.009 3.991 10 H 0.110 0.890 11 N -0.348 5.348 12 C 0.346 3.654 13 O -0.458 6.458 14 C -0.140 4.140 15 C -0.062 4.062 16 C -0.178 4.178 17 Br 0.061 6.939 18 C -0.078 4.078 19 C -0.118 4.118 20 C -0.186 4.186 21 O -0.361 6.361 22 Si 0.678 3.322 23 C -0.052 4.052 24 C -0.187 4.187 25 H 0.077 0.923 26 H 0.076 0.924 27 H 0.146 0.854 28 H 0.152 0.848 29 H 0.155 0.845 30 H 0.141 0.859 31 H 0.107 0.893 32 H 0.256 0.744 33 H 0.183 0.817 34 H 0.176 0.824 35 H 0.128 0.872 36 H 0.247 0.753 37 H -0.203 1.203 38 H -0.222 1.222 39 H 0.145 0.855 40 H 0.065 0.935 41 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 5.106 -7.897 0.071 9.404 hybrid contribution -1.505 0.701 0.077 1.662 sum 3.601 -7.196 0.148 8.048 Atomic orbital electron populations 1.23468 0.75418 1.05448 1.02174 1.86510 1.24503 1.33504 1.83816 1.24636 0.93747 0.80781 0.71004 1.90687 1.68411 1.37564 1.46849 1.21545 0.84836 0.98378 1.08496 1.22138 0.97212 0.94564 0.97721 0.89603 1.23372 0.94609 0.97922 0.99498 1.22530 0.86570 0.99900 0.90074 0.89006 1.45769 1.36399 1.11077 1.41542 1.18440 0.82646 0.83610 0.80727 1.90804 1.54095 1.35288 1.65604 1.19879 0.98772 0.95036 1.00335 1.21476 0.92003 0.98225 0.94510 1.21751 1.00213 0.93693 1.02168 1.96866 1.72673 1.30497 1.93902 1.21377 0.98320 0.90527 0.97625 1.20327 0.96779 0.96027 0.98712 1.25277 1.06520 0.87980 0.98827 1.86515 1.49557 1.43228 1.56824 0.93880 0.83297 0.78243 0.76758 1.21262 0.94317 0.97366 0.92262 1.23598 0.97214 1.00105 0.97796 0.92280 0.92427 0.85383 0.84834 0.84533 0.85874 0.89312 0.74363 0.81657 0.82416 0.87232 0.75262 1.20316 1.22183 0.85531 0.93517 0.87864 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 113.37 1.20 1.17 16 2 O -0.37 -0.61 10.57 -51.37 -0.54 -1.15 16 3 C 0.45 1.08 7.96 71.24 0.57 1.65 16 4 O -0.55 -5.60 15.51 21.98 0.34 -5.26 16 5 C -0.10 0.65 5.65 29.85 0.17 0.82 16 6 C -0.10 0.38 3.15 -10.27 -0.03 0.35 16 7 H 0.09 0.08 7.68 -2.38 -0.02 0.06 16 8 C -0.12 0.98 7.39 31.12 0.23 1.21 16 9 C 0.11 -0.16 4.24 45.52 0.19 0.03 16 10 H 0.09 0.43 7.47 -2.39 -0.02 0.41 16 11 N -0.70 1.91 5.31 -442.90 -2.35 -0.44 16 12 C 0.56 2.70 7.77 86.79 0.67 3.37 16 13 O -0.58 -8.44 15.95 -3.87 -0.06 -8.50 16 14 C -0.14 -0.16 5.87 -20.09 -0.12 -0.28 16 15 C -0.04 0.18 9.28 22.55 0.21 0.39 16 16 C -0.10 0.36 6.22 22.27 0.14 0.50 16 17 Br -0.03 0.11 33.69 -20.37 -0.69 -0.58 16 18 C -0.06 0.21 8.40 22.34 0.19 0.40 16 19 C -0.12 0.10 5.34 -19.90 -0.11 0.00 16 20 C -0.08 0.08 2.80 71.24 0.20 0.28 16 21 O -0.55 -0.11 12.83 -148.98 -1.91 -2.02 16 22 Si 0.77 -2.78 29.79 68.60 2.04 -0.73 16 23 C -0.03 -0.10 9.23 22.53 0.21 0.11 16 24 C -0.15 0.15 7.43 31.12 0.23 0.38 16 25 H 0.06 0.00 8.13 -2.39 -0.02 -0.02 16 26 H 0.06 0.01 8.13 -2.39 -0.02 -0.01 16 27 H 0.13 -0.86 8.14 -2.39 -0.02 -0.88 16 28 H 0.13 -1.54 7.85 -2.39 -0.02 -1.56 16 29 H 0.14 -1.57 8.14 -2.39 -0.02 -1.59 16 30 H 0.12 -1.76 8.08 -2.39 -0.02 -1.78 16 31 H 0.09 -0.76 8.14 -2.39 -0.02 -0.78 16 32 H 0.42 -4.23 6.76 -92.71 -0.63 -4.86 16 33 H 0.17 -1.76 6.40 -2.91 -0.02 -1.78 16 34 H 0.16 -1.17 4.89 -2.91 -0.01 -1.18 16 35 H 0.11 0.06 7.96 -2.38 -0.02 0.04 16 36 H 0.40 -3.37 8.70 -74.06 -0.64 -4.01 16 37 H -0.28 -0.12 7.11 99.48 0.71 0.59 16 38 H -0.29 -1.22 7.11 99.48 0.71 -0.51 16 39 H 0.13 0.89 7.65 -2.91 -0.02 0.87 16 40 H 0.05 0.26 8.14 -2.39 -0.02 0.24 16 41 H 0.10 -0.48 7.90 -2.39 -0.02 -0.50 16 Total: 0.00 -26.18 369.32 0.64 -25.54 By element: Atomic # 1 Polarization: -17.10 SS G_CDS: -0.14 Total: -17.24 kcal Atomic # 6 Polarization: 6.44 SS G_CDS: 3.95 Total: 10.39 kcal Atomic # 7 Polarization: 1.91 SS G_CDS: -2.35 Total: -0.44 kcal Atomic # 8 Polarization: -14.75 SS G_CDS: -2.18 Total: -16.93 kcal Atomic # 14 Polarization: -2.78 SS G_CDS: 2.04 Total: -0.73 kcal Atomic # 35 Polarization: 0.11 SS G_CDS: -0.69 Total: -0.58 kcal Total: -26.18 0.64 -25.54 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_17321982_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.254 kcal (2) G-P(sol) polarization free energy of solvation -26.179 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -95.433 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.638 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.541 kcal (6) G-S(sol) free energy of system = (1) + (5) -94.795 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds